prot_P-wetherbeei_contig8258.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8258.1.1
Unique Nameprot_P-wetherbeei_contig8258.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length146
Homology
BLAST of mRNA_P-wetherbeei_contig8258.1.1 vs. uniprot
Match: D7G6W9_ECTSI (60S ribosomal protein L13a n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6W9_ECTSI)

HSP 1 Score: 219 bits (559), Expect = 1.280e-70
Identity = 104/145 (71.72%), Postives = 127/145 (87.59%), Query Frame = 0
Query:    1 MQFLKKRHNTNPARGPYHFRSPARIFWRSVRGMVPQKTFRGQQALSRLACFEGIPAPYDTQKRMVVPDALQVVRLAPGRKHCVLGRLASEVGWKHRELVTRLEAKRKVKSEAFYQQKKAAVALKKRAEKEADLSAVTPILAEHGF 145
            MQ+ KKRHNTNP RGPYHFRSPARIFWR+VRGM+P+KT RG++AL+RL+CFEGIPAPYD +KRMVVP+ALQV+R+APGR+ CVLGRL+ EVGW H EL+ RLEA+RK+KSEA+Y  KKAA  LK +A  EA+L+AV P+L E+GF
Sbjct:   54 MQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPAPYDKKKRMVVPNALQVIRMAPGRRFCVLGRLSEEVGWPHAELIKRLEAQRKIKSEAYYVDKKAAKQLKDKATAEANLAAVAPVLEEYGF 198          
BLAST of mRNA_P-wetherbeei_contig8258.1.1 vs. uniprot
Match: A0A835Z9N1_9STRA (60S ribosomal protein L13a n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9N1_9STRA)

HSP 1 Score: 215 bits (547), Expect = 8.840e-69
Identity = 105/143 (73.43%), Postives = 124/143 (86.71%), Query Frame = 0
Query:    2 QFLKKRHNTNPARGPYHFRSPARIFWRSVRGMVPQKTFRGQQALSRLACFEGIPAPYDTQKRMVVPDALQVVRLAPGRKHCVLGRLASEVGWKHRELVTRLEAKRKVKSEAFYQQKKAAVALKKRAEKEADLSAVTPILAEHG 144
            QF KKR NTNPARGP+HFRSPARIFWR++RGM+P KT RGQ A++RL  FEGIPAP+D QKRMVVP AL+V+RLAPGRKHCVLGRL++EVGW+H +LV RLEAKRKV+SEAFYQ+KKA   L+ +AE  ADLSAVTP+L  +G
Sbjct:   56 QFRKKRMNTNPARGPFHFRSPARIFWRTIRGMIPHKTHRGQLAMARLKAFEGIPAPFDKQKRMVVPAALKVLRLAPGRKHCVLGRLSTEVGWRHGDLVERLEAKRKVRSEAFYQKKKANAQLRVKAEAAADLSAVTPVLESYG 198          
BLAST of mRNA_P-wetherbeei_contig8258.1.1 vs. uniprot
Match: A0A5J4Z3W8_PORPP (60S ribosomal protein L13a n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3W8_PORPP)

HSP 1 Score: 199 bits (506), Expect = 1.460e-62
Identity = 97/144 (67.36%), Postives = 119/144 (82.64%), Query Frame = 0
Query:    1 MQFLKKRHNTNPARGPYHFRSPARIFWRSVRGMVPQKTFRGQQALSRLACFEGIPAPYDTQKRMVVPDALQVVRLAPGRKHCVLGRLASEVGWKHRELVTRLEAKRKVKSEAFYQQKKAAVALKKRAEKEADLSAVTPILAEHG 144
            + FL+KR NTNP+RGP+HFR+P+RIFWR+VRGM+P KT RGQ+AL RL  FEGIP PYD  KRMVVPDAL+VVRLAP RKHCVLGRL+ EVGWK+++++ RLE KRKV S A+YQ+KKA   LK++A + ADLS VTP+L   G
Sbjct:   54 LMFLRKRMNTNPSRGPFHFRAPSRIFWRTVRGMLPHKTERGQEALGRLKVFEGIPPPYDKMKRMVVPDALRVVRLAPRRKHCVLGRLSHEVGWKYQDVLARLETKRKVHSAAYYQRKKALDKLKRKATESADLSKVTPVLEAFG 197          
BLAST of mRNA_P-wetherbeei_contig8258.1.1 vs. uniprot
Match: W7TSL6_9STRA (60s ribosomal protein l13a n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSL6_9STRA)

HSP 1 Score: 198 bits (504), Expect = 4.740e-62
Identity = 97/147 (65.99%), Postives = 121/147 (82.31%), Query Frame = 0
Query:    1 MQFLKKRHNTNPARGPYHFRSPARIFWRSVRGMVPQKTFRGQQALSRLACFEGIPAPYDTQKRMVVPDALQVVRLAPGRKHCVLGRLASEVGWKHRELVTRLEAKRKVKSEAFYQQKKAAVALKKRAEKEA--DLSAVTPILAEHGF 145
            MQFL+KR NTNP RGP+H+R+P+RI WR++RGM+P KTFRG QAL+RL  FEGIPAPYDT+KR+VVP AL+++RL PGR+ C L RLA EVGW HR+LV RLEAKRK+K+EA+YQQKKA  A K  AE++A  +LSAV  +LA  G+
Sbjct:   56 MQFLRKRTNTNPKRGPFHYRAPSRILWRTIRGMLPHKTFRGAQALARLTTFEGIPAPYDTKKRVVVPQALKILRLKPGRRFCTLSRLAHEVGWGHRDLVARLEAKRKIKAEAYYQQKKAGTAAKALAERKAASELSAVNNVLAGFGY 202          
BLAST of mRNA_P-wetherbeei_contig8258.1.1 vs. uniprot
Match: A0A7S1TSD8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSD8_9STRA)

HSP 1 Score: 184 bits (466), Expect = 4.750e-57
Identity = 90/141 (63.83%), Postives = 115/141 (81.56%), Query Frame = 0
Query:    5 KKRHNTNPARGPYHFRSPARIFWRSVRGMVPQKTFRGQQALSRLACFEGIPAPYDTQKRMVVPDALQVVRLAPGRKHCVLGRLASEVGWKHRELVTRLEAKRKVKSEAFYQQKKAAVALKKRAEKEADLSAVTPILAEHGF 145
            +KRH TNP +GP H+RSPAR+ WR VRGM+P KT RGQ AL+RLA FEGIPAPYD +KR+VVP+AL+V+RL PGRK  VL  LA+EVGWKH++L+ RLE KRK++++AFY++KKAA A K+ A    DLSAVTP+L  +G+
Sbjct:   17 RKRHLTNPKKGPIHYRSPARMLWRVVRGMLPHKTARGQAALARLATFEGIPAPYDKKKRVVVPEALKVLRLQPGRKFTVLKTLANEVGWKHKDLIERLENKRKLEAQAFYEKKKAAAAQKRAATAAVDLSAVTPVLEANGY 157          
BLAST of mRNA_P-wetherbeei_contig8258.1.1 vs. uniprot
Match: A0A7S1TQI9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQI9_9STRA)

HSP 1 Score: 184 bits (468), Expect = 8.940e-57
Identity = 90/143 (62.94%), Postives = 116/143 (81.12%), Query Frame = 0
Query:    3 FLKKRHNTNPARGPYHFRSPARIFWRSVRGMVPQKTFRGQQALSRLACFEGIPAPYDTQKRMVVPDALQVVRLAPGRKHCVLGRLASEVGWKHRELVTRLEAKRKVKSEAFYQQKKAAVALKKRAEKEADLSAVTPILAEHGF 145
            + +KRH TNP +GP H+RSPAR+ WR VRGM+P KT RGQ AL+RLA FEGIPAPYD +KR+VVP+AL+V+RL PGRK  VL  LA+EVGWKH++L+ RLE KRK++++AFY++KKAA A K+ A    DLSAVTP+L  +G+
Sbjct:   57 YRRKRHLTNPKKGPIHYRSPARMLWRVVRGMLPHKTARGQAALARLATFEGIPAPYDKKKRVVVPEALKVLRLQPGRKFTVLKTLANEVGWKHKDLIERLENKRKLEAQAFYEKKKAAAAQKRAATAAVDLSAVTPVLEANGY 199          
BLAST of mRNA_P-wetherbeei_contig8258.1.1 vs. uniprot
Match: A0A6V1NQ00_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NQ00_HETAK)

HSP 1 Score: 179 bits (455), Expect = 8.150e-55
Identity = 91/144 (63.19%), Postives = 112/144 (77.78%), Query Frame = 0
Query:    2 QFLKKRHNTNPARGPYHFRSPARIFWRSVRGMVPQKTFRGQQALSRLACFEGIPAPYDTQKRMVVPDALQVVRLAPGRKHCVLGRLASEVGWKHRELVTRLEAKRKVKSEAFYQQKKAAVALKKRAEKEADLSAVTPILAEHGF 145
            Q+LKKR NTNP RGP HFRSPA+IFWR+VRGM+P KT RG  A++RL CFEGIP P+D +KRMVVP+AL+V+RL   RK+  LG LA EVGW+   L+ RLEAKRK++S+A+Y +KKAAV LK +A  EADLS V  +LA  G 
Sbjct:   55 QWLKKRTNTNPKRGPIHFRSPAKIFWRTVRGMIPHKTVRGTAAMARLQCFEGIPHPWDKKKRMVVPEALKVLRLKAHRKNTKLGTLAGEVGWEKAGLIERLEAKRKIRSQAYYLKKKAAVVLKTKAAAEADLSPVAAVLAPLGM 198          
BLAST of mRNA_P-wetherbeei_contig8258.1.1 vs. uniprot
Match: A0A6S8ZJI7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZJI7_9STRA)

HSP 1 Score: 179 bits (455), Expect = 8.680e-55
Identity = 90/146 (61.64%), Postives = 113/146 (77.40%), Query Frame = 0
Query:    2 QFLKKRHNTNPARGPYHFRSPARIFWRSVRGMVPQKTFRGQQALSRLACFEGIPAPYDTQKRMVVPDALQVVRLAPGRKHCVLGRLASEVGWKHRELVTRLEAKRKVKSEAFYQQKKAAVALKKRAEKEA--DLSAVTPILAEHGF 145
            QF KKR NTNP RGP+HF+SPAR+ WR++RGM   KT RGQ+AL+RLA F+GIP PYD +KR V+P AL+V+RL PGR H VLG LA  VGWKH +L+ RLE KRKVK+EAFYQ+KKA   L+++AEK A  +L+ V  +LA  G+
Sbjct:   55 QFRKKRMNTNPGRGPFHFKSPARMVWRTIRGMCHHKTARGQEALARLATFDGIPHPYDKKKRQVIPAALRVMRLKPGRDHTVLGELADSVGWKHHDLLKRLEEKRKVKAEAFYQKKKARTQLREKAEKAAAGELAKVNEVLAAAGY 200          
BLAST of mRNA_P-wetherbeei_contig8258.1.1 vs. uniprot
Match: F0Y3B4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3B4_AURAN)

HSP 1 Score: 178 bits (452), Expect = 2.400e-54
Identity = 88/142 (61.97%), Postives = 106/142 (74.65%), Query Frame = 0
Query:    3 FLKKRHNTNPARGPYHFRSPARIFWRSVRGMVPQKTFRGQQALSRLACFEGIPAPYDTQKRMVVPDALQVVRLAPGRKHCVLGRLASEVGWKHRELVTRLEAKRKVKSEAFYQQKKAAVALKKRAEKEADLSAVTPILAEHG 144
            FLKKR NTNP RGP H+RSPAR+ WR+VRGM+P KT RGQQAL+RL CFEG+P PYD  K+MVVP+AL+V+RL PGR+  VL RLASE GWKH  L+ ++E KR  +S  FY  KK+A ALK +A   ADLS V  +L   G
Sbjct:   57 FLKKRTNTNPKRGPIHYRSPARMLWRTVRGMLPHKTHRGQQALARLQCFEGVPPPYDKMKKMVVPEALKVLRLKPGRRFTVLARLASEFGWKHEALIAKMEEKRVARSAEFYAAKKSATALKAKATAAADLSKVADVLEAFG 198          
BLAST of mRNA_P-wetherbeei_contig8258.1.1 vs. uniprot
Match: A0A7S2SDZ5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SDZ5_9STRA)

HSP 1 Score: 178 bits (451), Expect = 4.780e-54
Identity = 93/146 (63.70%), Postives = 110/146 (75.34%), Query Frame = 0
Query:    2 QFLKKRHNTNPARGPYHFRSPARIFWRSVRGMVPQKTFRGQQALSRLACFEGIPAPYDTQKRMVVPDALQVVRLAPGRKHCVLGRLASEVGWKHRELVTRLEAKRKVKSEAFYQQKKAAVALKKRAEKEA--DLSAVTPILAEHGF 145
            QF  K  NTNP RGP+HFRSPARI WR++RGMV QKT RGQ A+ RL+ FEGIP PYD  KR V+P AL+VVRL PGR  C LG LA+ VGWKH+ELV RLE KR+ KSEAF+Q+KKAA ALK +AE+ A  +L+ V   LA  G+
Sbjct:   65 QFRAKHMNTNPERGPFHFRSPARIVWRTIRGMVHQKTARGQAAIGRLSTFEGIPHPYDKMKRKVIPAALRVVRLKPGRNFCKLGDLANNVGWKHKELVDRLEDKRRAKSEAFFQKKKAAAALKAKAEEAAAGELAKVNETLAAAGY 210          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8258.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6W9_ECTSI1.280e-7071.7260S ribosomal protein L13a n=2 Tax=Ectocarpus TaxI... [more]
A0A835Z9N1_9STRA8.840e-6973.4360S ribosomal protein L13a n=1 Tax=Tribonema minus... [more]
A0A5J4Z3W8_PORPP1.460e-6267.3660S ribosomal protein L13a n=1 Tax=Porphyridium pu... [more]
W7TSL6_9STRA4.740e-6265.9960s ribosomal protein l13a n=1 Tax=Nannochloropsis... [more]
A0A7S1TSD8_9STRA4.750e-5763.83Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1TQI9_9STRA8.940e-5762.94Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6V1NQ00_HETAK8.150e-5563.19Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6S8ZJI7_9STRA8.680e-5561.64Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
F0Y3B4_AURAN2.400e-5461.97Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2SDZ5_9STRA4.780e-5463.70Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.10.250.3250coord: 96..145
e-value: 6.1E-12
score: 47.6
IPR005822Ribosomal protein L13PFAMPF00572Ribosomal_L13coord: 6..57
e-value: 8.5E-9
score: 35.6
IPR005822Ribosomal protein L13PANTHERPTHR11545RIBOSOMAL PROTEIN L13coord: 1..143
IPR005755Ribosomal protein L13, eukaryotic/archaealTIGRFAMTIGR01077TIGR01077coord: 2..94
e-value: 2.7E-30
score: 103.5
IPR005755Ribosomal protein L13, eukaryotic/archaealPANTHERPTHR11545:SF360S RIBOSOMAL PROTEIN L13A-RELATEDcoord: 1..143
IPR036899Ribosomal protein L13 superfamilyGENE3D3.90.1180.10Ribosomal protein L13coord: 1..95
e-value: 1.5E-33
score: 117.8
IPR036899Ribosomal protein L13 superfamilySUPERFAMILY52161Ribosomal protein L13coord: 2..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8258contigP-wetherbeei_contig8258:15..872 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8258.1.1mRNA_P-wetherbeei_contig8258.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8258 3..872 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8258.1.1 ID=prot_P-wetherbeei_contig8258.1.1|Name=mRNA_P-wetherbeei_contig8258.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=146bp
MQFLKKRHNTNPARGPYHFRSPARIFWRSVRGMVPQKTFRGQQALSRLAC
FEGIPAPYDTQKRMVVPDALQVVRLAPGRKHCVLGRLASEVGWKHRELVT
RLEAKRKVKSEAFYQQKKAAVALKKRAEKEADLSAVTPILAEHGF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005822Ribosomal_L13
IPR005755Ribosomal_L13_euk/arc
IPR036899Ribosomal_L13_sf