mRNA_P-wetherbeei_contig8258.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8258.1.1 vs. uniprot
Match: D7G6W9_ECTSI (60S ribosomal protein L13a n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6W9_ECTSI) HSP 1 Score: 226 bits (577), Expect = 2.740e-73 Identity = 108/149 (72.48%), Postives = 131/149 (87.92%), Query Frame = 1
Query: 1 KVKYMQFLKKRHNTNPARGPYHFRSPARIFWRSVRGMVPQKTFRGQQALSRLACFEGIPAPYDTQKRMVVPDALQVVRLAPGRKHCVLGRLASEVGWKHRELVTRLEAKRKVKSEAFYQQKKAAVALKKRAEKEADLSAVTPILAEHGF 447
KVKYMQ+ KKRHNTNP RGPYHFRSPARIFWR+VRGM+P+KT RG++AL+RL+CFEGIPAPYD +KRMVVP+ALQV+R+APGR+ CVLGRL+ EVGW H EL+ RLEA+RK+KSEA+Y KKAA LK +A EA+L+AV P+L E+GF
Sbjct: 50 KVKYMQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPAPYDKKKRMVVPNALQVIRMAPGRRFCVLGRLSEEVGWPHAELIKRLEAQRKIKSEAYYVDKKAAKQLKDKATAEANLAAVAPVLEEYGF 198
BLAST of mRNA_P-wetherbeei_contig8258.1.1 vs. uniprot
Match: A0A835Z9N1_9STRA (60S ribosomal protein L13a n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9N1_9STRA) HSP 1 Score: 221 bits (564), Expect = 2.690e-71 Identity = 109/148 (73.65%), Postives = 128/148 (86.49%), Query Frame = 1
Query: 1 KVKYMQFLKKRHNTNPARGPYHFRSPARIFWRSVRGMVPQKTFRGQQALSRLACFEGIPAPYDTQKRMVVPDALQVVRLAPGRKHCVLGRLASEVGWKHRELVTRLEAKRKVKSEAFYQQKKAAVALKKRAEKEADLSAVTPILAEHG 444
KVKY QF KKR NTNPARGP+HFRSPARIFWR++RGM+P KT RGQ A++RL FEGIPAP+D QKRMVVP AL+V+RLAPGRKHCVLGRL++EVGW+H +LV RLEAKRKV+SEAFYQ+KKA L+ +AE ADLSAVTP+L +G
Sbjct: 51 KVKYAQFRKKRMNTNPARGPFHFRSPARIFWRTIRGMIPHKTHRGQLAMARLKAFEGIPAPFDKQKRMVVPAALKVLRLAPGRKHCVLGRLSTEVGWRHGDLVERLEAKRKVRSEAFYQKKKANAQLRVKAEAAADLSAVTPVLESYG 198
BLAST of mRNA_P-wetherbeei_contig8258.1.1 vs. uniprot
Match: A0A5J4Z3W8_PORPP (60S ribosomal protein L13a n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3W8_PORPP) HSP 1 Score: 203 bits (517), Expect = 3.650e-64 Identity = 100/148 (67.57%), Postives = 122/148 (82.43%), Query Frame = 1
Query: 1 KVKYMQFLKKRHNTNPARGPYHFRSPARIFWRSVRGMVPQKTFRGQQALSRLACFEGIPAPYDTQKRMVVPDALQVVRLAPGRKHCVLGRLASEVGWKHRELVTRLEAKRKVKSEAFYQQKKAAVALKKRAEKEADLSAVTPILAEHG 444
K KY+ FL+KR NTNP+RGP+HFR+P+RIFWR+VRGM+P KT RGQ+AL RL FEGIP PYD KRMVVPDAL+VVRLAP RKHCVLGRL+ EVGWK+++++ RLE KRKV S A+YQ+KKA LK++A + ADLS VTP+L G
Sbjct: 50 KNKYLMFLRKRMNTNPSRGPFHFRAPSRIFWRTVRGMLPHKTERGQEALGRLKVFEGIPPPYDKMKRMVVPDALRVVRLAPRRKHCVLGRLSHEVGWKYQDVLARLETKRKVHSAAYYQRKKALDKLKRKATESADLSKVTPVLEAFG 197
BLAST of mRNA_P-wetherbeei_contig8258.1.1 vs. uniprot
Match: W7TSL6_9STRA (60s ribosomal protein l13a n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSL6_9STRA) HSP 1 Score: 201 bits (511), Expect = 4.800e-63 Identity = 98/150 (65.33%), Postives = 123/150 (82.00%), Query Frame = 1
Query: 4 VKYMQFLKKRHNTNPARGPYHFRSPARIFWRSVRGMVPQKTFRGQQALSRLACFEGIPAPYDTQKRMVVPDALQVVRLAPGRKHCVLGRLASEVGWKHRELVTRLEAKRKVKSEAFYQQKKAAVALKKRAEKEA--DLSAVTPILAEHGF 447
+YMQFL+KR NTNP RGP+H+R+P+RI WR++RGM+P KTFRG QAL+RL FEGIPAPYDT+KR+VVP AL+++RL PGR+ C L RLA EVGW HR+LV RLEAKRK+K+EA+YQQKKA A K AE++A +LSAV +LA G+
Sbjct: 53 TRYMQFLRKRTNTNPKRGPFHYRAPSRILWRTIRGMLPHKTFRGAQALARLTTFEGIPAPYDTKKRVVVPQALKILRLKPGRRFCTLSRLAHEVGWGHRDLVARLEAKRKIKAEAYYQQKKAGTAAKALAERKAASELSAVNNVLAGFGY 202
BLAST of mRNA_P-wetherbeei_contig8258.1.1 vs. uniprot
Match: A0A7S1TQI9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQI9_9STRA) HSP 1 Score: 189 bits (480), Expect = 1.570e-58 Identity = 93/149 (62.42%), Postives = 120/149 (80.54%), Query Frame = 1
Query: 1 KVKYMQFLKKRHNTNPARGPYHFRSPARIFWRSVRGMVPQKTFRGQQALSRLACFEGIPAPYDTQKRMVVPDALQVVRLAPGRKHCVLGRLASEVGWKHRELVTRLEAKRKVKSEAFYQQKKAAVALKKRAEKEADLSAVTPILAEHGF 447
KVK+ + +KRH TNP +GP H+RSPAR+ WR VRGM+P KT RGQ AL+RLA FEGIPAPYD +KR+VVP+AL+V+RL PGRK VL LA+EVGWKH++L+ RLE KRK++++AFY++KKAA A K+ A DLSAVTP+L +G+
Sbjct: 51 KVKWANYRRKRHLTNPKKGPIHYRSPARMLWRVVRGMLPHKTARGQAALARLATFEGIPAPYDKKKRVVVPEALKVLRLQPGRKFTVLKTLANEVGWKHKDLIERLENKRKLEAQAFYEKKKAAAAQKRAATAAVDLSAVTPVLEANGY 199
BLAST of mRNA_P-wetherbeei_contig8258.1.1 vs. uniprot
Match: A0A7S1TSD8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSD8_9STRA) HSP 1 Score: 186 bits (472), Expect = 6.790e-58 Identity = 92/149 (61.74%), Postives = 119/149 (79.87%), Query Frame = 1
Query: 1 KVKYMQFLKKRHNTNPARGPYHFRSPARIFWRSVRGMVPQKTFRGQQALSRLACFEGIPAPYDTQKRMVVPDALQVVRLAPGRKHCVLGRLASEVGWKHRELVTRLEAKRKVKSEAFYQQKKAAVALKKRAEKEADLSAVTPILAEHGF 447
+VK+ +KRH TNP +GP H+RSPAR+ WR VRGM+P KT RGQ AL+RLA FEGIPAPYD +KR+VVP+AL+V+RL PGRK VL LA+EVGWKH++L+ RLE KRK++++AFY++KKAA A K+ A DLSAVTP+L +G+
Sbjct: 9 RVKWANSRRKRHLTNPKKGPIHYRSPARMLWRVVRGMLPHKTARGQAALARLATFEGIPAPYDKKKRVVVPEALKVLRLQPGRKFTVLKTLANEVGWKHKDLIERLENKRKLEAQAFYEKKKAAAAQKRAATAAVDLSAVTPVLEANGY 157
BLAST of mRNA_P-wetherbeei_contig8258.1.1 vs. uniprot
Match: A0A6S8ZJI7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZJI7_9STRA) HSP 1 Score: 186 bits (472), Expect = 2.660e-57 Identity = 94/151 (62.25%), Postives = 117/151 (77.48%), Query Frame = 1
Query: 1 KVKYMQFLKKRHNTNPARGPYHFRSPARIFWRSVRGMVPQKTFRGQQALSRLACFEGIPAPYDTQKRMVVPDALQVVRLAPGRKHCVLGRLASEVGWKHRELVTRLEAKRKVKSEAFYQQKKAAVALKKRAEKEA--DLSAVTPILAEHGF 447
KVKY QF KKR NTNP RGP+HF+SPAR+ WR++RGM KT RGQ+AL+RLA F+GIP PYD +KR V+P AL+V+RL PGR H VLG LA VGWKH +L+ RLE KRKVK+EAFYQ+KKA L+++AEK A +L+ V +LA G+
Sbjct: 50 KVKYAQFRKKRMNTNPGRGPFHFKSPARMVWRTIRGMCHHKTARGQEALARLATFDGIPHPYDKKKRQVIPAALRVMRLKPGRDHTVLGELADSVGWKHHDLLKRLEEKRKVKAEAFYQKKKARTQLREKAEKAAAGELAKVNEVLAAAGY 200
BLAST of mRNA_P-wetherbeei_contig8258.1.1 vs. uniprot
Match: A0A7S0LS12_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LS12_9EUKA) HSP 1 Score: 183 bits (465), Expect = 2.550e-56 Identity = 91/139 (65.47%), Postives = 111/139 (79.86%), Query Frame = 1
Query: 1 KVKYMQFLKKRHNTNPARGPYHFRSPARIFWRSVRGMVPQKTFRGQQALSRLACFEGIPAPYDTQKRMVVPDALQVVRLAPGRKHCVLGRLASEVGWKHRELVTRLEAKRKVKSEAFYQQKKAAVALKKRAEKEADLSA 417
KVKY QF+KKR NTNP RGP+HFRSPARIFWR++RGM+P KT RGQ AL+RLACFEGIP PYD +KR+VVP AL+ +RL R VLG L+ EVGW + +LV +LEA+RK+K +A+Y +KKA VALK +A ADLSA
Sbjct: 56 KVKYAQFMKKRMNTNPNRGPFHFRSPARIFWRTLRGMLPHKTVRGQSALARLACFEGIPEPYDKKKRVVVPSALKSLRLRADRNFTVLGELSKEVGWGYTDLVAKLEAQRKIKEQAYYAEKKAQVALKSKAAASADLSA 194
BLAST of mRNA_P-wetherbeei_contig8258.1.1 vs. uniprot
Match: A0A7S3H512_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H512_9STRA) HSP 1 Score: 183 bits (465), Expect = 2.800e-56 Identity = 91/149 (61.07%), Postives = 114/149 (76.51%), Query Frame = 1
Query: 1 KVKYMQFLKKRHNTNPARGPYHFRSPARIFWRSVRGMVPQKTFRGQQALSRLACFEGIPAPYDTQKRMVVPDALQVVRLAPGRKHCVLGRLASEVGWKHRELVTRLEAKRKVKSEAFYQQKKAAVALKKRAEKEADLSAVTPILAEHGF 447
K+KY QF+KKR NTNP RGP+HFRSPARIFWR++RGM+P KT +GQ AL RLA FEGIP PYD +KR+VVP AL+ +RL R VLG L+ EVGW + +LV +LEA+RK+K +A+Y +KKA +ALK +A ADLS V ILA G+
Sbjct: 49 KIKYAQFIKKRMNTNPRRGPFHFRSPARIFWRTLRGMLPHKTVKGQLALGRLAAFEGIPEPYDKKKRVVVPSALKSLRLRADRNFTVLGELSKEVGWGYTDLVAKLEAQRKIKEQAYYAEKKAQIALKSKATASADLSPVNAILAPLGY 197
BLAST of mRNA_P-wetherbeei_contig8258.1.1 vs. uniprot
Match: A0A1Z5JJT5_FISSO (Large subunit ribosomal protein L13Ae n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JJT5_FISSO) HSP 1 Score: 183 bits (465), Expect = 3.170e-56 Identity = 92/151 (60.93%), Postives = 119/151 (78.81%), Query Frame = 1
Query: 1 KVKYMQFLKKRHNTNPARGPYHFRSPARIFWRSVRGMVPQKTFRGQQALSRLACFEGIPAPYDTQKRMVVPDALQVVRLAPGRKHCVLGRLASEVGWKHRELVTRLEAKRKVKSEAFYQQKKAAVALKKRAEKEA--DLSAVTPILAEHGF 447
KVKY QF KR NTNP RGP+HF+SPA + WR++RGMV QKT RGQ+AL RL+ FEGIPAPYD QKR+VVP AL+V+RL PGR + ++G LA VGWKHREL+ RLE+KRK ++ F+++KKA VAL+++AE+ A +L+ V +LA GF
Sbjct: 51 KVKYAQFRNKRMNTNPGRGPFHFKSPAMMVWRTIRGMVNQKTVRGQEALQRLSTFEGIPAPYDKQKRVVVPAALRVMRLKPGRDYTIIGDLAHAVGWKHRELLQRLESKRKADAQEFFEKKKAKVALRRKAEEAASSELAKVNEVLASAGF 201 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8258.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8258.1.1 >prot_P-wetherbeei_contig8258.1.1 ID=prot_P-wetherbeei_contig8258.1.1|Name=mRNA_P-wetherbeei_contig8258.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=146bp MQFLKKRHNTNPARGPYHFRSPARIFWRSVRGMVPQKTFRGQQALSRLACback to top mRNA from alignment at P-wetherbeei_contig8258:3..872+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8258.1.1 ID=mRNA_P-wetherbeei_contig8258.1.1|Name=mRNA_P-wetherbeei_contig8258.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=870bp|location=Sequence derived from alignment at P-wetherbeei_contig8258:3..872+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8258:3..872+ >mRNA_P-wetherbeei_contig8258.1.1 ID=mRNA_P-wetherbeei_contig8258.1.1|Name=mRNA_P-wetherbeei_contig8258.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=438bp|location=Sequence derived from alignment at P-wetherbeei_contig8258:3..872+ (Phaeothamnion wetherbeei SAG_119_79)back to top |