prot_P-wetherbeei_contig8252.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8252.2.1
Unique Nameprot_P-wetherbeei_contig8252.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length293
Homology
BLAST of mRNA_P-wetherbeei_contig8252.2.1 vs. uniprot
Match: D7G235_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G235_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 1.010e-21
Identity = 68/170 (40.00%), Postives = 97/170 (57.06%), Query Frame = 0
Query:    4 WRLRNCVHFKVGRTRPRVFPVIIHLLKEDLAWFNEEAESLWEELRQLLRDEVIRPSALTAGDEDKDPEGDRSHKRARKEDPRVNGRNLHFTWRYRPQTPCFTVLEYQKNSATDAPKSPAKGTIGRSNASSGSGGGKLKRGKSRGAAEVEAAGPPEFTALPMSRSSLLVWV 173
            W+ R  ++F  GR+R R  PV+IH+L +D+ WF+ +A SL++EL+ LLR+ VI  +    G+ DKD E  +S KRARKE+  + G  L FT+RYR   P +TVL Y  +    A          R ++S+GS  GK   G +   +       P F  LP+S S+LLVWV
Sbjct:   19 WQGRTLINFVAGRSRLRTLPVVIHILPKDIGWFSADA-SLFDELKLLLRERVISAT----GNGDKDAEAPKSRKRARKEEVCIQGERLQFTYRYRKTLPRYTVLSYTGDDIERA---------NRGSSSAGSSKGKRCVGSN---SXXXXXXXPAFRHLPLSESTLLVWV 171          
BLAST of mRNA_P-wetherbeei_contig8252.2.1 vs. uniprot
Match: A0A836CBI6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBI6_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 3.360e-19
Identity = 57/179 (31.84%), Postives = 97/179 (54.19%), Query Frame = 0
Query:    4 WRLRNCVHFKVGRTRPR-VFPVIIHLLKEDLAWFNEEAESLWEELRQLLRDEVIRP-----SALTAGDEDKDPEGDR---SHKRARKEDPRVNGRNLHFTWRYRPQTPCFTVLEYQKNSATDAPKSPAKGTIGRSNASSGSGGGKLKRGKSRGAAEVEAAGPPEFTALPMSRSSLLVWV 173
            W+ RNC++  +G  R + + P+++HLL +DLAW+N  ++ LWEEL++LL+D+VI P     SA+T GDE+++   D    S ++AR+ +  V G  L FT+R+RP  P ++++ +    A    +  A                      S+ AA       P + +LP++ ++LL WV
Sbjct:   19 WQPRNCINLLIGDARRKQIMPLVVHLLPQDLAWWNASSDKLWEELQRLLKDQVITPYLATPSAVT-GDEEEEKSTDAISTSRRKARRGEKCVQGEGLQFTFRFRPTKPVYSIITFNSVPAATQQQQTA----------------------SKQAA-------PAYASLPLNEATLLAWV 167          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8252.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G235_ECTSI1.010e-2140.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CBI6_9STRA3.360e-1931.84Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 236..292
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 246..261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8252contigP-wetherbeei_contig8252:1728..2809 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8252.2.1mRNA_P-wetherbeei_contig8252.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8252 1572..2857 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8252.2.1 ID=prot_P-wetherbeei_contig8252.2.1|Name=mRNA_P-wetherbeei_contig8252.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=293bp
MPVWRLRNCVHFKVGRTRPRVFPVIIHLLKEDLAWFNEEAESLWEELRQL
LRDEVIRPSALTAGDEDKDPEGDRSHKRARKEDPRVNGRNLHFTWRYRPQ
TPCFTVLEYQKNSATDAPKSPAKGTIGRSNASSGSGGGKLKRGKSRGAAE
VEAAGPPEFTALPMSRSSLLVWVSRGASPPHAMYGSRPLTCYFGDSARVS
AALRQAAEAAKRVEHGGGEGDDLELAIALSLSEARGGADGRSGSSGGGGG
GSSSGGGGSSVTAGGRSGAAAAAAAASKAPGRRSRYLDDDED*
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