prot_P-wetherbeei_contig7904.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7904.1.2
Unique Nameprot_P-wetherbeei_contig7904.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length310
Homology
BLAST of mRNA_P-wetherbeei_contig7904.1.2 vs. uniprot
Match: D7FX84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX84_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 4.180e-46
Identity = 116/284 (40.85%), Postives = 154/284 (54.23%), Query Frame = 0
Query:    1 MLDMLQTLMDKHGYFTSRLDGSVNSKERQVIINDFTRDPTK-FVFLMSTKACGLGINLQSASRVIIYDVNWNPSFDQQAQDRAYRQGCRLSFSALGGLGAIFRLVSVGTMEEMTYMRQIYKVQLGAAALDPEGQGGRRQFRAIQGVKGKEGELFGMHNLL-----------RLEATAAAAAMGSDGRGDGLQMAAVNDLTSAIEQGVKDAARALGRRRXXXXXXXXXXXXXDAGCGGISSXXXXXXXXXXGAGEDIDECKSLLELLGIDAFAHDDMVAKDERDE 272
            MLD+L++ +   GY   RLDG+ +SKERQ  IN+F  D    FVFL+ST+A G G+NL +ASRV++YDVNWNP+   QAQDRAYR G +          A+FRL+S GT+EEM YMRQIYK+Q+ +AA+  + +GGRRQF A+QG K ++GELFG+ NLL           R++  A  AA  + G G             +   G      A                  + G  G             G  ED +E   LL  LG+DA+ HD +VAKDE +E
Sbjct:  903 MLDVLESFVGAKGYVYRRLDGTTSSKERQARINEFNSDRAGVFVFLISTRAGGQGLNLHTASRVVLYDVNWNPALGLQAQDRAYRIGQKRKV-------AVFRLISKGTIEEMCYMRQIYKLQITSAAMGDQARGGRRQFNAVQGSKEQQGELFGIQNLLKFSDDSLLKTLRMKHEAGLAAATATGGGAAXXXXXXXXXAGSKGVGGIAGVDAADEEDLVVAMKNALGLSKEGGAKGEGE----------GPPED-NELAGLLGDLGVDAYTHDQLVAKDEGEE 1168          
BLAST of mRNA_P-wetherbeei_contig7904.1.2 vs. uniprot
Match: A0A836CAD9_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAD9_9STRA)

HSP 1 Score: 160 bits (404), Expect = 3.010e-40
Identity = 87/169 (51.48%), Postives = 116/169 (68.64%), Query Frame = 0
Query:    2 LDMLQTLMDKHGYFTSRLDGSVNSKERQVIINDFTRDPTKFVFLMSTKACGLGINLQSASRVIIYDVNWNPSFDQQAQDRAYRQGCRLSFSALGGLGA-IFRLVSVGTMEEMTYMRQIYKVQLGAAALDPE-GQGGRRQFRAIQGVKGKEGELFGMHNLLRLEATAAAA 168
            LD+++  +   GY   RLDG+    +RQ I+++F R P   V L+ST+A G+G+N+  ASRVIIYDVNWNPS D QAQDR YR G   +  A+      ++RL+S GT+EE+ YMRQ+YKVQL  +ALD + G GG R F A+QGV+G+EGELFG+ NLLR   T+  A
Sbjct:  987 LDVIEACVIGWGYERLRLDGATPLDQRQRIVDEFNRMPGAPVLLVSTRAGGIGLNINGASRVIIYDVNWNPSHDHQAQDRCYRIGQDKADKAVEDKAVEVYRLISCGTIEELIYMRQLYKVQLAGSALDSKAGGGGARHFNAMQGVRGEEGELFGVANLLRHSDTSMLA 1155          
BLAST of mRNA_P-wetherbeei_contig7904.1.2 vs. uniprot
Match: D7FIQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ3_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 4.070e-38
Identity = 81/162 (50.00%), Postives = 110/162 (67.90%), Query Frame = 0
Query:    1 MLDMLQTLMDKHGYFTSRLDGSVNSKERQVIINDFTRDPT--KFVFLMSTKACGLGINLQSASRVIIYDVNWNPSFDQQAQDRAYRQGCRLSFSALGGLGAIFRLVSVGTMEEMTYMRQIYKVQLGAAALDPEGQGGRRQFRAIQGVKGKEGELFGMHNLLR 160
            MLD+LQ L    GY   +LDG+    +RQ +I+ FT+       VFL+ST A G G+NLQ+AS+VI+YDVNWNP+ D QA+DRAYR G             +FRLVS GT+EE+TYMRQIYK+Q  AA +  + +GG RQF  +QGV+ ++GEL+G+ NL++
Sbjct:  771 MLDILQALCSSQGYTFLKLDGNTAKDQRQKMIDRFTKQNAIQNNVFLISTTAGGTGLNLQAASKVILYDVNWNPAQDAQAEDRAYRIGQLKEVE-------VFRLVSTGTIEELTYMRQIYKLQTSAATMGEKAEGGLRQFEGVQGVREEQGELWGISNLMK 925          
BLAST of mRNA_P-wetherbeei_contig7904.1.2 vs. uniprot
Match: A0A7S0IDP1_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IDP1_MICPS)

HSP 1 Score: 144 bits (362), Expect = 1.030e-37
Identity = 74/161 (45.96%), Postives = 104/161 (64.60%), Query Frame = 0
Query:    1 MLDMLQTLMDKHGYFTSRLDGSVNSKERQVIINDFTRDPTKFVFLMSTKACGLGINLQSASRVIIYDVNWNPSFDQQAQDRAYRQGCRLSFSALGGLGAIFRLVSVGTMEEMTYMRQIYKVQLGAAALDPEGQGGRRQFRAIQGVKGKEGELFGMHNLLRL 161
            +L +L+  + + GY  +RLDGS   KERQ +++DF    + FVFL+ST A G+G+N+ SA+RV+I+D NWNP+ D QAQDRAYR G R           ++RL++ GT+EEM Y RQ+YK Q    A+D   +  RR F  +QG K  +GELFG+ N+  L
Sbjct:   13 LLAVLEKFLTQRGYVYARLDGSTAGKERQKLVDDFNASESLFVFLLSTGAGGVGLNITSANRVVIFDPNWNPAKDAQAQDRAYRIGQRRDVD-------VYRLLAAGTIEEMVYQRQVYKQQQSNVAVDASKE--RRYFEGVQGDKQHQGELFGLSNMFTL 164          
BLAST of mRNA_P-wetherbeei_contig7904.1.2 vs. uniprot
Match: A0A7S2D7A5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D7A5_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.860e-37
Identity = 75/148 (50.68%), Postives = 103/148 (69.59%), Query Frame = 0
Query:   13 GYFTSRLDGSVNSKERQVIINDFTRDPTKFVFLMSTKACGLGINLQSASRVIIYDVNWNPSFDQQAQDRAYRQGCRLSFSALGGLGAIFRLVSVGTMEEMTYMRQIYKVQLGAAALDPEGQGGRRQFRAIQGVKGKEGELFGMHNLLR 160
            GY   RLDG+ +S  RQ ++  F   P+ F+FL ST+A G+G+NLQSAS+VI++DVNWNPS DQQAQDRAYR G +           ++RLVS+GT+EE+ YMRQ+YK  L +AA+  EG   +R F AI+G    +GEL+G+ NL++
Sbjct:    6 GYSYLRLDGNTSSGNRQQLVTQFNTQPSMFIFLCSTRAGGVGLNLQSASKVIVFDVNWNPSHDQQAQDRAYRIGQQSEVQ-------VYRLVSLGTVEELQYMRQLYKNALTSAAI--EGVSKQRLFEAIEGED--KGELYGLSNLMQ 142          
BLAST of mRNA_P-wetherbeei_contig7904.1.2 vs. uniprot
Match: A0A7R9TZ04_MICPS (Hypothetical protein (Fragment) n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TZ04_MICPS)

HSP 1 Score: 140 bits (352), Expect = 4.030e-37
Identity = 69/161 (42.86%), Postives = 102/161 (63.35%), Query Frame = 0
Query:    1 MLDMLQTLMDKHGYFTSRLDGSVNSKERQVIINDFTRDPTKFVFLMSTKACGLGINLQSASRVIIYDVNWNPSFDQQAQDRAYRQGCRLSFSALGGLGAIFRLVSVGTMEEMTYMRQIYKVQLGAAALDPEGQGGRRQFRAIQGVKGKEGELFGMHNLLRL 161
            +LD+L+  + + GY   RLDG      RQ +++DF    + FVFL+STKA G+G+N+ SA+RV+++D +WNP+ D QAQDRAYR G R   +       ++R ++  T+EE+ Y RQ+YK Q    A+D   +  RR F  +QG K ++GELFG+ NL  L
Sbjct:   32 LLDILEKFLSRRGYVYCRLDGGTAQNARQPLVDDFNNSSSMFVFLLSTKAGGVGLNITSANRVVVFDPDWNPALDLQAQDRAYRIGQRRDVN-------VYRFIAADTIEEIVYQRQVYKQQQSNVAVDAVRE--RRYFEGVQGDKRRQGELFGLENLFTL 183          
BLAST of mRNA_P-wetherbeei_contig7904.1.2 vs. uniprot
Match: UPI000C7638E7 (DNA excision repair protein ERCC-6-like 2 isoform X1 n=4 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C7638E7)

HSP 1 Score: 149 bits (375), Expect = 1.420e-36
Identity = 75/161 (46.58%), Postives = 110/161 (68.32%), Query Frame = 0
Query:    1 MLDMLQTLMDKHGYFTSRLDGSVNSKERQVIINDFTRDPTKFVFLMSTKACGLGINLQSASRVIIYDVNWNPSFDQQAQDRAYRQGCRLSFSALGGLGAIFRLVSVGTMEEMTYMRQIYKVQLGAAALDPEGQGGRRQFRAIQGVKGKEGELFGMHNLLRL 161
            +LD+L   +   GY  +RLDG+   ++RQ ++N+F  DP  FVFL+STKA G+G+N+  A+ VI++D NWNPS D QAQDRAYR G     +       ++RL+SVG +EE+ Y+RQ+YK QL ++++D  G+  RR F A+QG   ++GELFG+ NL R+
Sbjct:  141 VLDILSMFLRSKGYTYTRLDGNTKMEQRQRLVNEFNTDPGIFVFLVSTKAGGVGLNITGANNVIVFDPNWNPSHDLQAQDRAYRIGQTRDVN-------VYRLISVGCIEEIIYLRQVYKQQLASSSVD--GETARRYFLAVQGDPTRKGELFGIRNLFRV 292          
BLAST of mRNA_P-wetherbeei_contig7904.1.2 vs. uniprot
Match: V4B480_LOTGI (Uncharacterized protein (Fragment) n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4B480_LOTGI)

HSP 1 Score: 148 bits (373), Expect = 1.460e-36
Identity = 75/161 (46.58%), Postives = 107/161 (66.46%), Query Frame = 0
Query:    1 MLDMLQTLMDKHGYFTSRLDGSVNSKERQVIINDFTRDPTKFVFLMSTKACGLGINLQSASRVIIYDVNWNPSFDQQAQDRAYRQGCRLSFSALGGLGAIFRLVSVGTMEEMTYMRQIYKVQLGAAALDPEGQGGRRQFRAIQGVKGKEGELFGMHNLLRL 161
            +LD+L+  +    Y   RLDGSV++K+R  ++ +F ++P  F+FL+STKA GLG+NL  A+RV+I+D NWNPS D QAQDRAYR G R           ++RL+S GT+EE  Y+RQIYK QLG   +  E    +R F  +QG + ++GELFG+ N+ +L
Sbjct:  461 LLDILEQYLISSSYEFRRLDGSVSNKKRMELVREFNKNPNIFIFLISTKAGGLGLNLTGANRVVIFDPNWNPSHDLQAQDRAYRIGQRQDVQ-------VYRLISAGTIEENVYLRQIYKQQLGNVVVSSENA--KRLFHGVQGNRFRQGELFGVQNMFQL 612          
BLAST of mRNA_P-wetherbeei_contig7904.1.2 vs. uniprot
Match: A0A7S0GVF0_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GVF0_MICPS)

HSP 1 Score: 149 bits (376), Expect = 1.470e-36
Identity = 74/158 (46.84%), Postives = 106/158 (67.09%), Query Frame = 0
Query:    1 MLDMLQTLMDKHGYFTSRLDGSVNSKERQVIINDFTRDPTKFVFLMSTKACGLGINLQSASRVIIYDVNWNPSFDQQAQDRAYRQGCRLSFSALGGLGAIFRLVSVGTMEEMTYMRQIYKVQLGAAALDPEGQGGRRQFRAIQGVKGKEGELFGMHNL 158
            +LD+L+  M +HGY  SRLDG+ N K RQ +++DF    + F FL+ST+A G+G+N+ SA+RV+I+D NWNP+ D QAQDR+YR G R           ++RL++ GT+EE+ Y RQ+YK Q    A+  EG   RR F  +QG K ++GELFG+ N+
Sbjct:  685 LLDILERFMTRHGYVFSRLDGTTNQKHRQTVVDDFNASRSTFAFLLSTRAGGVGLNIVSANRVVIFDPNWNPALDLQAQDRSYRIGQRRDVD-------VYRLLTSGTLEELVYQRQVYKQQQSNVAM--EGVEERRYFEGVQGDKEQKGELFGVANV 833          
BLAST of mRNA_P-wetherbeei_contig7904.1.2 vs. uniprot
Match: A0A7S0SII7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SII7_9CHLO)

HSP 1 Score: 146 bits (368), Expect = 2.560e-36
Identity = 72/161 (44.72%), Postives = 107/161 (66.46%), Query Frame = 0
Query:    1 MLDMLQTLMDKHGYFTSRLDGSVNSKERQVIINDFTRDPTKFVFLMSTKACGLGINLQSASRVIIYDVNWNPSFDQQAQDRAYRQGCRLSFSALGGLGAIFRLVSVGTMEEMTYMRQIYKVQLGAAALDPEGQGGRRQFRAIQGVKGKEGELFGMHNLLRL 161
            +LD+L+T + + GY + RLDG+   +ERQ +++DF +  + F+FL+STKA G+G+N+ SA+RV+I+D NWNP+ D QAQDRAYR G +           ++R ++ GT+EE+ Y RQ+YK Q    ALD   +  RR F  +QG K  +GELFG+ N+  L
Sbjct:  329 LLDILETFLVRRGYVSCRLDGNTPQRERQKLVDDFNKSSSLFIFLLSTKAGGVGLNITSANRVVIFDPNWNPALDLQAQDRAYRIGQQRDVD-------VYRFLTSGTLEEIVYQRQVYKQQQSNMALDAVKE--RRYFEGVQGDKEHQGELFGLSNMFAL 480          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7904.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX84_ECTSI4.180e-4640.85Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CAD9_9STRA3.010e-4051.48P-loop containing nucleoside triphosphate hydrolas... [more]
D7FIQ3_ECTSI4.070e-3850.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0IDP1_MICPS1.030e-3745.96Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A7S2D7A5_9STRA1.860e-3750.68Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7R9TZ04_MICPS4.030e-3742.86Hypothetical protein (Fragment) n=2 Tax=Micromonas... [more]
UPI000C7638E71.420e-3646.58DNA excision repair protein ERCC-6-like 2 isoform ... [more]
V4B480_LOTGI1.460e-3646.58Uncharacterized protein (Fragment) n=1 Tax=Lottia ... [more]
A0A7S0GVF0_MICPS1.470e-3646.84Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A7S0SII7_9CHLO2.560e-3644.72Hypothetical protein (Fragment) n=1 Tax=Mantoniell... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 3..86
e-value: 2.4E-18
score: 76.9
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 5..86
e-value: 7.1E-14
score: 52.1
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..143
score: 14.084139
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..186
e-value: 4.5E-40
score: 139.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..243
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..310
NoneNo IPR availablePANTHERPTHR45629SNF2/RAD54 FAMILY MEMBERcoord: 1..231
NoneNo IPR availablePANTHERPTHR45629:SF7DNA EXCISION REPAIR PROTEIN ERCC-6-RELATEDcoord: 1..231
NoneNo IPR availableCDDcd18793SF2_C_SNFcoord: 1..86
e-value: 1.19484E-37
score: 128.748

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7904contigP-wetherbeei_contig7904:151..2124 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7904.1.2mRNA_P-wetherbeei_contig7904.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7904 121..2124 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7904.1.2 ID=prot_P-wetherbeei_contig7904.1.2|Name=mRNA_P-wetherbeei_contig7904.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=310bp
MLDMLQTLMDKHGYFTSRLDGSVNSKERQVIINDFTRDPTKFVFLMSTKA
CGLGINLQSASRVIIYDVNWNPSFDQQAQDRAYRQGCRLSFSALGGLGAI
FRLVSVGTMEEMTYMRQIYKVQLGAAALDPEGQGGRRQFRAIQGVKGKEG
ELFGMHNLLRLEATAAAAAMGSDGRGDGLQMAAVNDLTSAIEQGVKDAAR
ALGRRRRRQRDTGGGGGGGDAGCGGISSGGGDGGDGDDGAGEDIDECKSL
LELLGIDAFAHDDMVAKDERDEGSGSESEEESDGGGGGGGSSSDGDGSGG
GSLLAGYGYE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase