prot_P-wetherbeei_contig7358.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7358.1.1
Unique Nameprot_P-wetherbeei_contig7358.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length985
Homology
BLAST of mRNA_P-wetherbeei_contig7358.1.1 vs. uniprot
Match: D8LF16_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF16_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 5.300e-14
Identity = 83/297 (27.95%), Postives = 114/297 (38.38%), Query Frame = 0
Query:  107 CLLLSALRQLFRWNPAVAATLCARHFPDVRPWCVWQAVYDAPQWAITPAAPAAPVVASAGRHGSPRHMASPVRGGAAATVPGAPAAXXXXXXXXXXXXXGAAREPSKLRKDAMFHAYLSTLLESHGEACRRDRHVVHRCLELSLQIAARLRAAMAG----GASQAAATAFTGDRSAVTAVIEADAVFCERALKFPAIALAPTG------------------GGGCSDPAAVARF----------------YLAEVDATIALWVVDPAGINLDPLWLLSCVQSHGHWPALLPLAEALA 365
            CLLL+ LR+LFRW+ A AA +CA  FP VRPW V  A++       T + P  PV     R+   +  A P   G A                               R DA FHAYL  +L  H   CR D  V+ RCL+LSL+++ +LR+  +        +AA   F   R A       D    E  ++ P  A +  G                  G G   P    R                 Y   V+  ++ W        LDPLWLL  +++H +WP    +  A+A
Sbjct: 1059 CLLLNNLRELFRWDVAAAAEMCADAFPGVRPWNVHHALHRDQDKPWTTSEPVTPVGGGTARY---QAQAPPAGAGVA-----------------------GGDGDGGTRTDAAFHAYLWAVLRKHPGECRGDWKVIQRCLQLSLRLSTKLRSLPSDHPLHSFCKAATRNFKRRRRAD------DPATRETGVRHPEGAFSTDGRGQFHNSRRWRAGGGSGGGSGMRTPTGDLRLGVEDSGETGDGSAWRRYSDVVEELVSQWCKHGDAFGLDPLWLLPKLRAHKNWPVAFRICGAIA 1323          
BLAST of mRNA_P-wetherbeei_contig7358.1.1 vs. uniprot
Match: A0A6H5JMZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ7_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 7.210e-13
Identity = 82/294 (27.89%), Postives = 115/294 (39.12%), Query Frame = 0
Query:  107 CLLLSALRQLFRWNPAVAATLCARHFPDVRPWCVWQAVYDAPQWAITPAAPAAPVVASAGRHGSPRHMASPVRGGAAATVPGAPAAXXXXXXXXXXXXXGAAREPSK--LRKDAMFHAYLSTLLESHGEACRRDRHVVHRCLELSLQIAARLRAAMAGGASQAAATAFTGDRSAVTAVIEADAVFCERALKFPAIALAPTG----------------GGGC------------------SDPAAVARFYLAEVDATIALWVVDPAGINLDPLWLLSCVQSHGHWPALLPLAEAL 364
            CLLL+ L +LFRW+ A AA +CA  FP VRPW V  A++       T + P                  +PV GG+A     AP A             G AR       R DA FHAYL  +L  H   CR D  V+ RCL+LSL+++ +LR+  +           T  R+        D    E  ++ P    +  G                GGG                   +D  +  R Y   V+  ++ W        LDPLWLL  +++H +WP    +  A+
Sbjct:  528 CLLLNNLGELFRWDVAAAAEMCADAFPGVRPWNVHHALHRDQDKPWTTSEPV-----------------TPVEGGSARYQTHAPPAGA-----------GVARGDGDGGTRTDAAFHAYLWAVLRKHPGECRGDWKVIQRCLQLSLRLSTKLRSLPSDHPLHNFCKVAT--RNLKRRQRADDPATREAGVRHPEGGFSTDGRGQFHNSRRWRAGGGSGGGSGMRTPTGDLRLGVEDSGETDDGSAWRRYSDVVEEVVSQWCKHGDAFGLDPLWLLPKLRAHKNWPVAFRICGAI 791          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7358.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LF16_ECTSI5.300e-1427.95PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JMZ7_9PHAE7.210e-1327.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 894..969
e-value: 0.0036
score: 26.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 725..860
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 761..789
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..211
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 938..974

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7358contigP-wetherbeei_contig7358:91..3045 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7358.1.1mRNA_P-wetherbeei_contig7358.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7358 2..3112 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7358.1.1 ID=prot_P-wetherbeei_contig7358.1.1|Name=mRNA_P-wetherbeei_contig7358.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=985bp
MELAALLSGPSTSRPLAKAVLDLFGGNDASGGGGGRGRGDGSSSDGAGGG
GGGGKGGGRGAASSSSRGRRGSGKEVGRSRSRSGSGGAGSGKEQHGTARP
PPPLPLCLLLSALRQLFRWNPAVAATLCARHFPDVRPWCVWQAVYDAPQW
AITPAAPAAPVVASAGRHGSPRHMASPVRGGAAATVPGAPAAGARGGGSG
GGGGNGAAREPSKLRKDAMFHAYLSTLLESHGEACRRDRHVVHRCLELSL
QIAARLRAAMAGGASQAAATAFTGDRSAVTAVIEADAVFCERALKFPAIA
LAPTGGGGCSDPAAVARFYLAEVDATIALWVVDPAGINLDPLWLLSCVQS
HGHWPALLPLAEALAAGAAGTESNVTGAESVASLSAVARPNGVAAADVPL
GGTSAAAGATQLPTPHLGVALAALDVAADAALRDADDALLADVLTSIWRA
ETLAAAAAAVPVVVGAPTGVAVTRGGEAASKAAMATATAASPAAAPPAAT
AAATTITGKPAMAKAAAAKAAVSSAAGTGKAAAMKTAKAAAAVAMPQPAA
PAPAPAPATAAATPAIAAAPPHPTLLETGSVGPRLVSCIERLLGGGTALA
VRDGGSAQQPLTAAPAASAAAAVAASAAPLVAGACLAGLGAPLTLMLLEF
VPRLLELLPAAFFAELAGAAEAARRQARAAVALRAAATSALWAGRGGVDP
VSPQLTWLAVEELVSSLHEKGQVPGAAAAAAATTRQGARNSGTGSGVADE
GHSGGSAGGANRRDEVEKVASGVPGHRRASSDRAEVDTPEVTALHGGWQS
LEGNRAREGGGGSGGGGGGTGNGGGGGGTGGGGRGGGSGGGGFDSVGLVG
GSRSDSRVGDKGKDPFAVAIALGLNLMAPGGRPWGTHVPAGTNCFACTLP
LAGPAGSGVGGDDRGGRNDGAAAATAATEAADSGGGDSRRIVLPCGHGYH
LECVMPSEHEQLAASCPRCLEEWVAGADAAAKGW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING