prot_P-wetherbeei_contig7325.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig7325.1.1
Unique Name	prot_P-wetherbeei_contig7325.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	500

Homology

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BLAST of mRNA_P-wetherbeei_contig7325.1.1 vs. uniprot
Match: D8LEC5_ECTSI (Tup_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC5_ECTSI)

HSP 1 Score: 186 bits (473), Expect = 2.670e-47
Identity = 102/191 (53.40%), Postives = 129/191 (67.54%), Query Frame = 0

Query:  325 SVPATLNWRV-----EGHEGPLRSP----SVALEKCEDLRSVVCCVRFSRDGTLVATGSHSCVKVFDVRTWRELFMRRKLTED------THPDLDHYVRAVCFSPDGKRIAAGMEGNAVKIFDLQGDGEGSGGTMALSGHTAEVYSLDWVDDMLASGSGDGHVRLWSAADGRCRRPLGDSKDGPQDGVTSV 500
            ++PA L+++V     EG  G   +     +V L K +DLRSVVCCVRFS DGT +A GSHSCVKVFDV ++++L++ RK  ++      T    D YVRAVCFSPDG  I AGME N+ K+  L+ +G G  G + LSGH +EVYSLDWV DM+ASGSGDG +RLW +  G C+  LGD   GPQDGVTSV
Sbjct:  446 AIPAELSYQVRYEAEEGEGGRAAAAKDGLAVELAKSQDLRSVVCCVRFSTDGTKIAAGSHSCVKVFDVNSFKQLYVCRKQVQEEQGAPQTADGGDPYVRAVCFSPDGLSIVAGMEKNSAKVLVLEEEG-GRQGAITLSGHESEVYSLDWVSDMIASGSGDGRIRLWDSVTGACKASLGDM-GGPQDGVTSV 634

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BLAST of mRNA_P-wetherbeei_contig7325.1.1 vs. uniprot
Match: A0A835Z1H0_9STRA (TUP1-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1H0_9STRA)

HSP 1 Score: 152 bits (384), Expect = 5.700e-38
Identity = 84/160 (52.50%), Postives = 101/160 (63.12%), Query Frame = 0

Query:  342 RSPSVALEKCEDLRSVVCCVRFSRDGTLVATGSHSCVKVFDVRTW-RELFMRRKLTEDTHPDLDHYVRAVCFSPDGKRIAAGMEGNAVKIFDLQGDGEGSGGTMALSGHTAEVYSLDWVDDMLASGSGDGHVRLWSAADGRCRRPLGDSKDGPQDGVTSV 500
            R P+V LE C  L SVVCCVRFS DG+ +ATGSH CVKVFDV T                P  D YVR+VC SPDG+R+AA ME N+ ++  L  DG      + L GH +EVYSLDWV  ++A+GSGD  VR+W +  G CR  LGDS+ GP DGVT V
Sbjct:    6 RRPAVELEGCLSLGSVVCCVRFSPDGSRLATGSHGCVKVFDVATGCSPAPPSPPPLVPLPPPKDPYVRSVCMSPDGERVAAVMENNSARVLSLMEDGPAP---LDLVGHQSEVYSLDWVGALIATGSGDCQVRVWDSNSGACRMVLGDSR-GPTDGVTCV 161

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BLAST of mRNA_P-wetherbeei_contig7325.1.1 vs. uniprot
Match: A0A329SF69_9STRA (General transcriptional corepressor n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SF69_9STRA)

HSP 1 Score: 146 bits (368), Expect = 6.840e-35
Identity = 74/169 (43.79%), Postives = 106/169 (62.72%), Query Frame = 0

Query:  344 PSVALEKCEDLRSVVCCVRFSRDGTLVATGSHSCVKVFDVRTWRELFMRRKLTED------------THPDLDHYVRAVCFSPDGKRIAAGMEGNAVKIFDLQGDGEGSGGTMALSGHTAEVYSLDWVDDMLASGSGDGHVRLWSAADGRCRRPLGDSKDGPQDGVTSV 500
            P+  + +  D +SVVCCVRFS DGT++A+G H   +VFDV+T    F+  +                  PD D YVRAVCFSPD  ++ AGM  N ++++D+  + EG     A++GH +E+YSLD+V+D++ SGSGD  VRLW A +G+C++  G+   GP DGVTSV
Sbjct:  153 PAAEMHQSMDHQSVVCCVRFSSDGTMMASGCHKTAQVFDVKTGDRKFLVSRPAGSGQTPTSQANAAANEPD-DAYVRAVCFSPDCTKLVAGMPQNTIRVWDIASNEEGP----AMTGHESEIYSLDYVNDLIVSGSGDRKVRLWDARNGQCKKIFGNESGGPSDGVTSV 316

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BLAST of mRNA_P-wetherbeei_contig7325.1.1 vs. uniprot
Match: A0A484DZ53_BRELC (Tup_N domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZ53_BRELC)

HSP 1 Score: 149 bits (375), Expect = 8.480e-35
Identity = 76/169 (44.97%), Postives = 107/169 (63.31%), Query Frame = 0

Query:  344 PSVALEKCEDLRSVVCCVRFSRDGTLVATGSHSCVKVFDVRTWRELFMRRKLTEDTH------------PDLDHYVRAVCFSPDGKRIAAGMEGNAVKIFDLQGDGEGSGGTMALSGHTAEVYSLDWVDDMLASGSGDGHVRLWSAADGRCRRPLGDSKDGPQDGVTSV 500
            P+  + +  D +SVVCCVRFS DGT++A+G H   +VFDV+T    F+  +     H            PD D YVRAVCFSPD  ++ AGM  N ++I+D+  + EG     A++GH +E+YSLD+V+D++ SGSGD  VRLW A +G+C++  G+   GP DGVTSV
Sbjct:  407 PAAEMHQSMDHQSVVCCVRFSSDGTMMASGCHKTAQVFDVKTGDRKFLVSRPAGSGHTPTSQTNTAANEPD-DAYVRAVCFSPDCTKLVAGMPQNTIRIWDIASNEEGP----AMTGHESEIYSLDYVNDLIVSGSGDRKVRLWDARNGQCKKIFGNESGGPSDGVTSV 570

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BLAST of mRNA_P-wetherbeei_contig7325.1.1 vs. uniprot
Match: A0A0P1AQC9_PLAHL (WD40 repeat-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AQC9_PLAHL)

HSP 1 Score: 148 bits (374), Expect = 2.000e-34
Identity = 75/169 (44.38%), Postives = 108/169 (63.91%), Query Frame = 0

Query:  344 PSVALEKCEDLRSVVCCVRFSRDGTLVATGSHSCVKVFDVRTWRELFMRRKLTEDTH------------PDLDHYVRAVCFSPDGKRIAAGMEGNAVKIFDLQGDGEGSGGTMALSGHTAEVYSLDWVDDMLASGSGDGHVRLWSAADGRCRRPLGDSKDGPQDGVTSV 500
            P+  + +  D +SVVCCVRFS DGT++A+G H   +VFDV+T    ++  +     H            PD D YVRAVCFSPD  ++ AGM  N ++I+D+  + EG    +A++GH +E+YSLD+V+D++ SGSGD  VRLW A +G+C++  G+   GP DGVTSV
Sbjct:  421 PAAEMHQSMDHQSVVCCVRFSSDGTMMASGCHKTAQVFDVKTGDRKYLVSRPAGSGHTPTSQANTAANEPD-DAYVRAVCFSPDCTKLVAGMPQNTIRIWDIGSNEEG----LAMTGHESEIYSLDYVNDLIVSGSGDRKVRLWDARNGQCKKIFGNESGGPSDGVTSV 584

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BLAST of mRNA_P-wetherbeei_contig7325.1.1 vs. uniprot
Match: A0A5D6YQP4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YQP4_9STRA)

HSP 1 Score: 141 bits (356), Expect = 4.860e-34
Identity = 74/167 (44.31%), Postives = 105/167 (62.87%), Query Frame = 0

Query:  344 PSVALEKCEDLRSVVCCVRFSRDGTLVATGSHSCVKVFDVRTW-RELFMRRKLTEDTHPDL---------DHYVRAVCFSPDGKRIAAGMEGNAVKIFDLQGDGEGSGGTMALSGHTAEVYSLDWVDDMLASGSGDGHVRLWSAADGRCRRPLGDSKDGPQDGVTSV 500
            P   + +  D +SVVC VRFS DGT++A+G H   +VFDV+T  R+ F+ R  + + + +          D YVRAVCFSPD  ++ AGM  N ++I+D+  + EG     A++GH +E+YSLD+V+D + SGSGD  VRLW A  G+C++  G    GP DGVTSV
Sbjct:   47 PVAEMHQSMDHQSVVCVVRFSNDGTMMASGCHKTAQVFDVKTGDRKFFVSRPGSNNGNANNAAAAANEADDAYVRAVCFSPDCTKLVAGMPHNTIRIWDIASNEEGP----AMTGHESEIYSLDYVNDFIVSGSGDRKVRLWDARSGQCKKIFGSESGGPSDGVTSV 209

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BLAST of mRNA_P-wetherbeei_contig7325.1.1 vs. uniprot
Match: M4BJ72_HYAAE (Tup_N domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BJ72_HYAAE)

HSP 1 Score: 146 bits (368), Expect = 6.200e-34
Identity = 74/169 (43.79%), Postives = 108/169 (63.91%), Query Frame = 0

Query:  344 PSVALEKCEDLRSVVCCVRFSRDGTLVATGSHSCVKVFDVRTWRELFMRRK------LTEDTHPDL------DHYVRAVCFSPDGKRIAAGMEGNAVKIFDLQGDGEGSGGTMALSGHTAEVYSLDWVDDMLASGSGDGHVRLWSAADGRCRRPLGDSKDGPQDGVTSV 500
            P+  + +  D +SVVCCVRFS DGT++A+G H   +VFDV+T    F+  +      LT  +  +       D YVRAVCFSPD  ++ AGM  N ++++D+  + EG     A++GH +E+YSLD+V+D++ SGSGD  VRLW A +G+C++  G+   GP DGVTSV
Sbjct:  426 PAAEMHQSMDHQSVVCCVRFSSDGTMMASGCHKTAQVFDVKTGDRKFLVSRPAGSNGLTPTSQANASANEADDAYVRAVCFSPDCTKLVAGMPQNTIRVWDIASNEEGP----AMTGHESEIYSLDYVNDLIVSGSGDRKVRLWDARNGQCKKIFGNESGGPSDGVTSV 590

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BLAST of mRNA_P-wetherbeei_contig7325.1.1 vs. uniprot
Match: A0A0W8D732_PHYNI (Flavoprotein YCP4 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D732_PHYNI)

HSP 1 Score: 144 bits (364), Expect = 1.630e-33
Identity = 73/169 (43.20%), Postives = 105/169 (62.13%), Query Frame = 0

Query:  344 PSVALEKCEDLRSVVCCVRFSRDGTLVATGSHSCVKVFDVRTWRELFMRRKLTED------------THPDLDHYVRAVCFSPDGKRIAAGMEGNAVKIFDLQGDGEGSGGTMALSGHTAEVYSLDWVDDMLASGSGDGHVRLWSAADGRCRRPLGDSKDGPQDGVTSV 500
            P+  + +  D +SVVCCVRFS DGT++A+G H   +VFDV+T    F+  +                  PD D YVRAVCFSPD  ++ AGM  N ++++D+  + EG     A++GH +E+YSLD+V+D++ SGSGD  VRLW   +G+C++  G+   GP DGVTSV
Sbjct:  368 PAAEMHQSMDHQSVVCCVRFSSDGTMMASGCHKTAQVFDVKTGDRKFLVSRPAGSGQTPTSQANAAANEPD-DAYVRAVCFSPDCSKLVAGMPQNTIRVWDIASNEEGP----AMTGHESEIYSLDYVNDLIVSGSGDRKVRLWDPRNGQCKKIFGNESGGPSDGVTSV 531

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BLAST of mRNA_P-wetherbeei_contig7325.1.1 vs. uniprot
Match: H3G6P7_PHYRM (Tup_N domain-containing protein n=21 Tax=Phytophthora TaxID=4783 RepID=H3G6P7_PHYRM)

HSP 1 Score: 144 bits (362), Expect = 2.220e-33
Identity = 74/169 (43.79%), Postives = 106/169 (62.72%), Query Frame = 0

Query:  344 PSVALEKCEDLRSVVCCVRFSRDGTLVATGSHSCVKVFDVRTWRELFM--RRKLTEDTHPDL----------DHYVRAVCFSPDGKRIAAGMEGNAVKIFDLQGDGEGSGGTMALSGHTAEVYSLDWVDDMLASGSGDGHVRLWSAADGRCRRPLGDSKDGPQDGVTSV 500
            P+  + +  D +SVVCCVRFS DGT++A+G H   +VFDV+T    F+  R   +    P            D YVRAVCFSPD  ++ AGM  N ++++D+  + EG     A++GH +E+YSLD+V+D++ SGSGD  VRLW A +G+C++  G+   GP DGVTSV
Sbjct:  297 PAAEMHQSMDHQSVVCCVRFSSDGTMMASGCHKTAQVFDVKTGDRKFLVSRPAGSNGQTPTSAANAAANEADDAYVRAVCFSPDCTKLVAGMPQNTIRVWDIASNEEGP----AMTGHESEIYSLDYVNDLIVSGSGDRKVRLWDARNGQCKKIFGNESGGPSDGVTSV 461

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BLAST of mRNA_P-wetherbeei_contig7325.1.1 vs. uniprot
Match: A0A3M6VUW2_9STRA (Tup_N domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VUW2_9STRA)

HSP 1 Score: 144 bits (363), Expect = 5.390e-33
Identity = 72/169 (42.60%), Postives = 105/169 (62.13%), Query Frame = 0

Query:  344 PSVALEKCEDLRSVVCCVRFSRDGTLVATGSHSCVKVFDVRTWRELFM------------RRKLTEDTHPDLDHYVRAVCFSPDGKRIAAGMEGNAVKIFDLQGDGEGSGGTMALSGHTAEVYSLDWVDDMLASGSGDGHVRLWSAADGRCRRPLGDSKDGPQDGVTSV 500
            P+  + +  D +SVVCCVRFS DGT++A+G H   +VFDV+T    F+              +     +   D YVRAVCFSPD  ++ AGM  N ++++D+  + EG     A++GH +E+YSLD+V+D++ SGSGD  VRLW A +G+C++  G+   GP DGVTSV
Sbjct:  404 PAAEMHQSMDHQSVVCCVRFSSDGTMMASGCHKTAQVFDVKTGDRKFLVSRPAGSNGQTPTSQANAPANEADDAYVRAVCFSPDCTKLVAGMPQNTIRVWDIASNEEGP----AMTGHESEIYSLDYVNDLIVSGSGDRKVRLWDARNGQCKKIFGNETGGPSDGVTSV 568

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig7325.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig7325.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LEC5_ECTSI	2.670e-47	53.40	Tup_N domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A835Z1H0_9STRA	5.700e-38	52.50	TUP1-like protein (Fragment) n=1 Tax=Tribonema min...	[more]
A0A329SF69_9STRA	6.840e-35	43.79	General transcriptional corepressor n=1 Tax=Phytop...	[more]
A0A484DZ53_BRELC	8.480e-35	44.97	Tup_N domain-containing protein n=1 Tax=Bremia lac...	[more]
A0A0P1AQC9_PLAHL	2.000e-34	44.38	WD40 repeat-containing protein n=1 Tax=Plasmopara ...	[more]
A0A5D6YQP4_9STRA	4.860e-34	44.31	Uncharacterized protein n=1 Tax=Pythium brassicum ...	[more]
M4BJ72_HYAAE	6.200e-34	43.79	Tup_N domain-containing protein n=1 Tax=Hyaloperon...	[more]
A0A0W8D732_PHYNI	1.630e-33	43.20	Flavoprotein YCP4 n=1 Tax=Phytophthora nicotianae ...	[more]
H3G6P7_PHYRM	2.220e-33	43.79	Tup_N domain-containing protein n=21 Tax=Phytophth...	[more]
A0A3M6VUW2_9STRA	5.390e-33	42.60	Tup_N domain-containing protein n=1 Tax=Peronospor...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 22..95
None	No IPR available	GENE3D	1.20.5.340		coord: 11..95 e-value: 6.9E-18 score: 66.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..286
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..108
None	No IPR available	PANTHER	PTHR19848	WD40 REPEAT PROTEIN	coord: 350..500
None	No IPR available	PANTHER	PTHR19848:SF4	F-BOX AND WD REPEAT DOMAIN CONTAINING 7	coord: 350..500
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 446..476 score: 10.785595
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 439..476 e-value: 3.5E-6 score: 36.6 coord: 344..382 e-value: 0.057 score: 22.6 coord: 391..432 e-value: 0.46 score: 19.1
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 446..476 e-value: 1.1E-4 score: 22.9 coord: 405..432 e-value: 0.011 score: 16.6 coord: 358..382 e-value: 0.021 score: 15.7
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 446..485 score: 13.382416
IPR013890	Transcriptional repressor Tup1, N-terminal	PFAM	PF08581	Tup_N	coord: 17..92 e-value: 7.7E-18 score: 64.6
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 323..500 e-value: 1.7E-37 score: 131.0
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 355..492

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig7325	contig	P-wetherbeei_contig7325:5..2260 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig7325.1.1	mRNA_P-wetherbeei_contig7325.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig7325 5..2272 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig7325.1.1 ID=prot_P-wetherbeei_contig7325.1.1|Name=mRNA_P-wetherbeei_contig7325.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=500bp
MASGGGPPPPAARATMRCVELIEQLRAELDGLSSEMNGHKSEREEYEKKF
RAQLVEMERIQRMLQLLQEAHVEAKAQYEAEIQRLRRQLDARRNNSGSGS
GDGGGAAAGGGGASAGGAGGGGKSAAGGGGGPSSGDGSSGGGGGGTAAGS
GGGDGETGAAGGNPFADGPTRSPMAGGAGDEGNGSSGDAAKEAKRLNGAA
EDGWTAKRARLDGAVGGGNGGASSQRSSSGGGGGDDRGGTVALGSGAQAA
GGGSGGGAAAPPRPTPPGGAMAAKRGAPGSTAGGSGGRGVAAAGGIGGAE
NGGGGGTARAPVTVAVASAVASAMSVPATLNWRVEGHEGPLRSPSVALEK
CEDLRSVVCCVRFSRDGTLVATGSHSCVKVFDVRTWRELFMRRKLTEDTH
PDLDHYVRAVCFSPDGKRIAAGMEGNAVKIFDLQGDGEGSGGTMALSGHT
AEVYSLDWVDDMLASGSGDGHVRLWSAADGRCRRPLGDSKDGPQDGVTSV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001680	WD40_repeat
IPR013890	Tscrpt_rep_Tup1_N
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR036322	WD40_repeat_dom_sf