mRNA_P-wetherbeei_contig7325.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7325.1.1 vs. uniprot
Match: D8LEC5_ECTSI (Tup_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC5_ECTSI) HSP 1 Score: 186 bits (473), Expect = 2.920e-47 Identity = 102/191 (53.40%), Postives = 129/191 (67.54%), Query Frame = 1
Query: 985 SVPATLNWRV-----EGHEGPLRSP----SVALEKCEDLRSVVCCVRFSRDGTLVATGSHSCVKVFDVRTWRELFMRRKLTED------THPDLDHYVRAVCFSPDGKRIAAGMEGNAVKIFDLQGDGEGSGGTMALSGHTAEVYSLDWVDDMLASGSGDGHVRLWSAADGRCRRPLGDSKDGPQDGVTSV 1512
++PA L+++V EG G + +V L K +DLRSVVCCVRFS DGT +A GSHSCVKVFDV ++++L++ RK ++ T D YVRAVCFSPDG I AGME N+ K+ L+ +G G G + LSGH +EVYSLDWV DM+ASGSGDG +RLW + G C+ LGD GPQDGVTSV
Sbjct: 446 AIPAELSYQVRYEAEEGEGGRAAAAKDGLAVELAKSQDLRSVVCCVRFSTDGTKIAAGSHSCVKVFDVNSFKQLYVCRKQVQEEQGAPQTADGGDPYVRAVCFSPDGLSIVAGMEKNSAKVLVLEEEG-GRQGAITLSGHESEVYSLDWVSDMIASGSGDGRIRLWDSVTGACKASLGDM-GGPQDGVTSV 634
BLAST of mRNA_P-wetherbeei_contig7325.1.1 vs. uniprot
Match: A0A835Z1H0_9STRA (TUP1-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1H0_9STRA) HSP 1 Score: 152 bits (384), Expect = 6.100e-38 Identity = 84/160 (52.50%), Postives = 101/160 (63.12%), Query Frame = 1
Query: 1036 RSPSVALEKCEDLRSVVCCVRFSRDGTLVATGSHSCVKVFDVRTW-RELFMRRKLTEDTHPDLDHYVRAVCFSPDGKRIAAGMEGNAVKIFDLQGDGEGSGGTMALSGHTAEVYSLDWVDDMLASGSGDGHVRLWSAADGRCRRPLGDSKDGPQDGVTSV 1512
R P+V LE C L SVVCCVRFS DG+ +ATGSH CVKVFDV T P D YVR+VC SPDG+R+AA ME N+ ++ L DG + L GH +EVYSLDWV ++A+GSGD VR+W + G CR LGDS+ GP DGVT V
Sbjct: 6 RRPAVELEGCLSLGSVVCCVRFSPDGSRLATGSHGCVKVFDVATGCSPAPPSPPPLVPLPPPKDPYVRSVCMSPDGERVAAVMENNSARVLSLMEDGPAP---LDLVGHQSEVYSLDWVGALIATGSGDCQVRVWDSNSGACRMVLGDSR-GPTDGVTCV 161
BLAST of mRNA_P-wetherbeei_contig7325.1.1 vs. uniprot
Match: A0A329SF69_9STRA (General transcriptional corepressor n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SF69_9STRA) HSP 1 Score: 146 bits (368), Expect = 7.280e-35 Identity = 74/169 (43.79%), Postives = 106/169 (62.72%), Query Frame = 1
Query: 1042 PSVALEKCEDLRSVVCCVRFSRDGTLVATGSHSCVKVFDVRTWRELFMRRKLTED------------THPDLDHYVRAVCFSPDGKRIAAGMEGNAVKIFDLQGDGEGSGGTMALSGHTAEVYSLDWVDDMLASGSGDGHVRLWSAADGRCRRPLGDSKDGPQDGVTSV 1512
P+ + + D +SVVCCVRFS DGT++A+G H +VFDV+T F+ + PD D YVRAVCFSPD ++ AGM N ++++D+ + EG A++GH +E+YSLD+V+D++ SGSGD VRLW A +G+C++ G+ GP DGVTSV
Sbjct: 153 PAAEMHQSMDHQSVVCCVRFSSDGTMMASGCHKTAQVFDVKTGDRKFLVSRPAGSGQTPTSQANAAANEPD-DAYVRAVCFSPDCTKLVAGMPQNTIRVWDIASNEEGP----AMTGHESEIYSLDYVNDLIVSGSGDRKVRLWDARNGQCKKIFGNESGGPSDGVTSV 316
BLAST of mRNA_P-wetherbeei_contig7325.1.1 vs. uniprot
Match: A0A484DZ53_BRELC (Tup_N domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZ53_BRELC) HSP 1 Score: 149 bits (375), Expect = 9.060e-35 Identity = 76/169 (44.97%), Postives = 107/169 (63.31%), Query Frame = 1
Query: 1042 PSVALEKCEDLRSVVCCVRFSRDGTLVATGSHSCVKVFDVRTWRELFMRRKLTEDTH------------PDLDHYVRAVCFSPDGKRIAAGMEGNAVKIFDLQGDGEGSGGTMALSGHTAEVYSLDWVDDMLASGSGDGHVRLWSAADGRCRRPLGDSKDGPQDGVTSV 1512
P+ + + D +SVVCCVRFS DGT++A+G H +VFDV+T F+ + H PD D YVRAVCFSPD ++ AGM N ++I+D+ + EG A++GH +E+YSLD+V+D++ SGSGD VRLW A +G+C++ G+ GP DGVTSV
Sbjct: 407 PAAEMHQSMDHQSVVCCVRFSSDGTMMASGCHKTAQVFDVKTGDRKFLVSRPAGSGHTPTSQTNTAANEPD-DAYVRAVCFSPDCTKLVAGMPQNTIRIWDIASNEEGP----AMTGHESEIYSLDYVNDLIVSGSGDRKVRLWDARNGQCKKIFGNESGGPSDGVTSV 570
BLAST of mRNA_P-wetherbeei_contig7325.1.1 vs. uniprot
Match: A0A0P1AQC9_PLAHL (WD40 repeat-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AQC9_PLAHL) HSP 1 Score: 148 bits (374), Expect = 2.150e-34 Identity = 75/169 (44.38%), Postives = 108/169 (63.91%), Query Frame = 1
Query: 1042 PSVALEKCEDLRSVVCCVRFSRDGTLVATGSHSCVKVFDVRTWRELFMRRKLTEDTH------------PDLDHYVRAVCFSPDGKRIAAGMEGNAVKIFDLQGDGEGSGGTMALSGHTAEVYSLDWVDDMLASGSGDGHVRLWSAADGRCRRPLGDSKDGPQDGVTSV 1512
P+ + + D +SVVCCVRFS DGT++A+G H +VFDV+T ++ + H PD D YVRAVCFSPD ++ AGM N ++I+D+ + EG +A++GH +E+YSLD+V+D++ SGSGD VRLW A +G+C++ G+ GP DGVTSV
Sbjct: 421 PAAEMHQSMDHQSVVCCVRFSSDGTMMASGCHKTAQVFDVKTGDRKYLVSRPAGSGHTPTSQANTAANEPD-DAYVRAVCFSPDCTKLVAGMPQNTIRIWDIGSNEEG----LAMTGHESEIYSLDYVNDLIVSGSGDRKVRLWDARNGQCKKIFGNESGGPSDGVTSV 584
BLAST of mRNA_P-wetherbeei_contig7325.1.1 vs. uniprot
Match: A0A5D6YQP4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YQP4_9STRA) HSP 1 Score: 141 bits (356), Expect = 5.150e-34 Identity = 74/167 (44.31%), Postives = 105/167 (62.87%), Query Frame = 1
Query: 1042 PSVALEKCEDLRSVVCCVRFSRDGTLVATGSHSCVKVFDVRTW-RELFMRRKLTEDTHPDL---------DHYVRAVCFSPDGKRIAAGMEGNAVKIFDLQGDGEGSGGTMALSGHTAEVYSLDWVDDMLASGSGDGHVRLWSAADGRCRRPLGDSKDGPQDGVTSV 1512
P + + D +SVVC VRFS DGT++A+G H +VFDV+T R+ F+ R + + + + D YVRAVCFSPD ++ AGM N ++I+D+ + EG A++GH +E+YSLD+V+D + SGSGD VRLW A G+C++ G GP DGVTSV
Sbjct: 47 PVAEMHQSMDHQSVVCVVRFSNDGTMMASGCHKTAQVFDVKTGDRKFFVSRPGSNNGNANNAAAAANEADDAYVRAVCFSPDCTKLVAGMPHNTIRIWDIASNEEGP----AMTGHESEIYSLDYVNDFIVSGSGDRKVRLWDARSGQCKKIFGSESGGPSDGVTSV 209
BLAST of mRNA_P-wetherbeei_contig7325.1.1 vs. uniprot
Match: M4BJ72_HYAAE (Tup_N domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BJ72_HYAAE) HSP 1 Score: 146 bits (368), Expect = 6.610e-34 Identity = 74/169 (43.79%), Postives = 108/169 (63.91%), Query Frame = 1
Query: 1042 PSVALEKCEDLRSVVCCVRFSRDGTLVATGSHSCVKVFDVRTWRELFMRRK------LTEDTHPDL------DHYVRAVCFSPDGKRIAAGMEGNAVKIFDLQGDGEGSGGTMALSGHTAEVYSLDWVDDMLASGSGDGHVRLWSAADGRCRRPLGDSKDGPQDGVTSV 1512
P+ + + D +SVVCCVRFS DGT++A+G H +VFDV+T F+ + LT + + D YVRAVCFSPD ++ AGM N ++++D+ + EG A++GH +E+YSLD+V+D++ SGSGD VRLW A +G+C++ G+ GP DGVTSV
Sbjct: 426 PAAEMHQSMDHQSVVCCVRFSSDGTMMASGCHKTAQVFDVKTGDRKFLVSRPAGSNGLTPTSQANASANEADDAYVRAVCFSPDCTKLVAGMPQNTIRVWDIASNEEGP----AMTGHESEIYSLDYVNDLIVSGSGDRKVRLWDARNGQCKKIFGNESGGPSDGVTSV 590
BLAST of mRNA_P-wetherbeei_contig7325.1.1 vs. uniprot
Match: A0A0W8D732_PHYNI (Flavoprotein YCP4 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D732_PHYNI) HSP 1 Score: 144 bits (364), Expect = 1.730e-33 Identity = 73/169 (43.20%), Postives = 105/169 (62.13%), Query Frame = 1
Query: 1042 PSVALEKCEDLRSVVCCVRFSRDGTLVATGSHSCVKVFDVRTWRELFMRRKLTED------------THPDLDHYVRAVCFSPDGKRIAAGMEGNAVKIFDLQGDGEGSGGTMALSGHTAEVYSLDWVDDMLASGSGDGHVRLWSAADGRCRRPLGDSKDGPQDGVTSV 1512
P+ + + D +SVVCCVRFS DGT++A+G H +VFDV+T F+ + PD D YVRAVCFSPD ++ AGM N ++++D+ + EG A++GH +E+YSLD+V+D++ SGSGD VRLW +G+C++ G+ GP DGVTSV
Sbjct: 368 PAAEMHQSMDHQSVVCCVRFSSDGTMMASGCHKTAQVFDVKTGDRKFLVSRPAGSGQTPTSQANAAANEPD-DAYVRAVCFSPDCSKLVAGMPQNTIRVWDIASNEEGP----AMTGHESEIYSLDYVNDLIVSGSGDRKVRLWDPRNGQCKKIFGNESGGPSDGVTSV 531
BLAST of mRNA_P-wetherbeei_contig7325.1.1 vs. uniprot
Match: H3G6P7_PHYRM (Tup_N domain-containing protein n=21 Tax=Phytophthora TaxID=4783 RepID=H3G6P7_PHYRM) HSP 1 Score: 144 bits (362), Expect = 2.370e-33 Identity = 74/169 (43.79%), Postives = 106/169 (62.72%), Query Frame = 1
Query: 1042 PSVALEKCEDLRSVVCCVRFSRDGTLVATGSHSCVKVFDVRTWRELFM--RRKLTEDTHPDL----------DHYVRAVCFSPDGKRIAAGMEGNAVKIFDLQGDGEGSGGTMALSGHTAEVYSLDWVDDMLASGSGDGHVRLWSAADGRCRRPLGDSKDGPQDGVTSV 1512
P+ + + D +SVVCCVRFS DGT++A+G H +VFDV+T F+ R + P D YVRAVCFSPD ++ AGM N ++++D+ + EG A++GH +E+YSLD+V+D++ SGSGD VRLW A +G+C++ G+ GP DGVTSV
Sbjct: 297 PAAEMHQSMDHQSVVCCVRFSSDGTMMASGCHKTAQVFDVKTGDRKFLVSRPAGSNGQTPTSAANAAANEADDAYVRAVCFSPDCTKLVAGMPQNTIRVWDIASNEEGP----AMTGHESEIYSLDYVNDLIVSGSGDRKVRLWDARNGQCKKIFGNESGGPSDGVTSV 461
BLAST of mRNA_P-wetherbeei_contig7325.1.1 vs. uniprot
Match: A0A3M6VUW2_9STRA (Tup_N domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VUW2_9STRA) HSP 1 Score: 144 bits (363), Expect = 5.760e-33 Identity = 72/169 (42.60%), Postives = 105/169 (62.13%), Query Frame = 1
Query: 1042 PSVALEKCEDLRSVVCCVRFSRDGTLVATGSHSCVKVFDVRTWRELFM------------RRKLTEDTHPDLDHYVRAVCFSPDGKRIAAGMEGNAVKIFDLQGDGEGSGGTMALSGHTAEVYSLDWVDDMLASGSGDGHVRLWSAADGRCRRPLGDSKDGPQDGVTSV 1512
P+ + + D +SVVCCVRFS DGT++A+G H +VFDV+T F+ + + D YVRAVCFSPD ++ AGM N ++++D+ + EG A++GH +E+YSLD+V+D++ SGSGD VRLW A +G+C++ G+ GP DGVTSV
Sbjct: 404 PAAEMHQSMDHQSVVCCVRFSSDGTMMASGCHKTAQVFDVKTGDRKFLVSRPAGSNGQTPTSQANAPANEADDAYVRAVCFSPDCTKLVAGMPQNTIRVWDIASNEEGP----AMTGHESEIYSLDYVNDLIVSGSGDRKVRLWDARNGQCKKIFGNETGGPSDGVTSV 568 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7325.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7325.1.1 >prot_P-wetherbeei_contig7325.1.1 ID=prot_P-wetherbeei_contig7325.1.1|Name=mRNA_P-wetherbeei_contig7325.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=500bp MASGGGPPPPAARATMRCVELIEQLRAELDGLSSEMNGHKSEREEYEKKFback to top mRNA from alignment at P-wetherbeei_contig7325:5..2272- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7325.1.1 ID=mRNA_P-wetherbeei_contig7325.1.1|Name=mRNA_P-wetherbeei_contig7325.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2268bp|location=Sequence derived from alignment at P-wetherbeei_contig7325:5..2272- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7325:5..2272- >mRNA_P-wetherbeei_contig7325.1.1 ID=mRNA_P-wetherbeei_contig7325.1.1|Name=mRNA_P-wetherbeei_contig7325.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1500bp|location=Sequence derived from alignment at P-wetherbeei_contig7325:5..2272- (Phaeothamnion wetherbeei SAG_119_79)back to top |