prot_P-wetherbeei_contig729.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig729.1.1
Unique Nameprot_P-wetherbeei_contig729.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length224
Homology
BLAST of mRNA_P-wetherbeei_contig729.1.1 vs. uniprot
Match: A0A6H5JHB6_9PHAE (RF_PROK_I domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JHB6_9PHAE)

HSP 1 Score: 280 bits (717), Expect = 1.230e-89
Identity = 141/221 (63.80%), Postives = 175/221 (79.19%), Query Frame = 0
Query:    1 MYTRWCERRGFSVQEVASSPGEEAGVRSATVAVGGEAAFGWLRSEAGVHRLVRISPFDAGGRRHTSFAQVRVYPALEEREKSAADLPILDKDLRVETMRAQGAGGQHVNTTDSAVRITHIPTGLAASCQNERSQHRNRQVPDSAMRVLRGKLWARVEEERKRSRDDYAQGLGDNAWGNQIRSYVLAPYQMVKDHRTGQETGDVAAVLAGDLDPFVEAALVA 221
            MYTRW E + F+++ + SSPG+EAG+RS  V V GE+A+GWLRSEAGVHRLVR SP+D  GRRHTSF+QVRV+P        AA + I  KDL+V+TMRAQGAGGQHVNTTDSAVR+TH+PTGL A  Q++RSQH+NR   ++AMR LR K++ R EEER   R++YA GLGDNA+GNQIRSYVL+PYQMVKDHRTG++ GDV+ VL      F++AAL+A
Sbjct:  240 MYTRWAETKAFTLRPLNSSPGDEAGLRSVMVFVEGESAYGWLRSEAGVHRLVRNSPYDPNGRRHTSFSQVRVFPEAGGESGDAAKVEIPAKDLKVDTMRAQGAGGQHVNTTDSAVRLTHLPTGLVALSQSDRSQHKNR---ENAMRALRAKIFQREEEERHAKRNEYAAGLGDNAFGNQIRSYVLSPYQMVKDHRTGKQEGDVSGVLDXXXXXFIDAALIA 457          
BLAST of mRNA_P-wetherbeei_contig729.1.1 vs. uniprot
Match: W2QJH8_PHYPN (Peptide chain release factor 2 n=9 Tax=Phytophthora TaxID=4783 RepID=W2QJH8_PHYPN)

HSP 1 Score: 268 bits (684), Expect = 6.110e-85
Identity = 134/220 (60.91%), Postives = 164/220 (74.55%), Query Frame = 0
Query:    1 MYTRWCERRGFSVQEVASSPGEEAGVRSATVAVGGEAAFGWLRSEAGVHRLVRISPFDAGGRRHTSFAQVRVYPALEEREKSAADLPILDKDLRVETMRAQGAGGQHVNTTDSAVRITHIPTGLAASCQNERSQHRNRQVPDSAMRVLRGKLWARVEEERKRSRDDYAQGLGDNAWGNQIRSYVLAPYQMVKDHRTGQETGDVAAVLAGDLDPFVEAALV 220
            MY RW E RGF VQ V  S GEEAG RS  + + G  A+GW +SEAGVHRLVRISPFD+ GRRHTSFAQVRVYP   E  +S+A++ + +KDLR++T R+ G GGQHVN+TDSA+RITH+PTG+    Q++RSQHRN+     AM +LR KL+ R  EE  R+R  +AQGLGDNAWGNQIRSYVL PYQ+VKDHRT    G+ A VL GD+D F+E  L+
Sbjct:  220 MYARWGEARGFQVQFVDESAGEEAGFRSVVLRLDGAYAYGWAKSEAGVHRLVRISPFDSAGRRHTSFAQVRVYPMAAE-GRSSAEIEVSNKDLRIDTFRSSGPGGQHVNSTDSAIRITHLPTGIVVQSQSDRSQHRNKA---EAMAILRAKLYQRKLEEEARARQQFAQGLGDNAWGNQIRSYVLHPYQLVKDHRTNYSEGNTAQVLDGDIDQFIEKMLL 435          
BLAST of mRNA_P-wetherbeei_contig729.1.1 vs. uniprot
Match: A0A2P4XMB8_9STRA (Peptide chain release factor n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XMB8_9STRA)

HSP 1 Score: 259 bits (661), Expect = 2.720e-84
Identity = 131/220 (59.55%), Postives = 160/220 (72.73%), Query Frame = 0
Query:    1 MYTRWCERRGFSVQEVASSPGEEAGVRSATVAVGGEAAFGWLRSEAGVHRLVRISPFDAGGRRHTSFAQVRVYPALEEREKSAADLPILDKDLRVETMRAQGAGGQHVNTTDSAVRITHIPTGLAASCQNERSQHRNRQVPDSAMRVLRGKLWARVEEERKRSRDDYAQGLGDNAWGNQIRSYVLAPYQMVKDHRTGQETGDVAAVLAGDLDPFVEAALV 220
            MY RW E RGF VQ    S G+EAG RS  + + G  A+GW +SEAGVHRLVRISPFD+ GRRHTSFAQVRVYP   E  +S  D+ IL KDLR++T R+ G GGQHVN+TDSA+RITH+PTG+    Q++RSQHRN+     AM +LR KL+ R  +E  +SR  +AQGLG+NAWGNQIRSYVL PYQ+VKDHRT    G+   VL GD+D F+E  L+
Sbjct:    1 MYARWGEARGFQVQYADESVGDEAGFRSVVLRLDGAYAYGWAKSEAGVHRLVRISPFDSAGRRHTSFAQVRVYPMATE-GRSNEDIEILTKDLRIDTFRSSGPGGQHVNSTDSAIRITHLPTGIVVQSQSDRSQHRNKA---EAMAMLRAKLYQRKLDEEVQSRQKFAQGLGENAWGNQIRSYVLHPYQLVKDHRTNYSEGNTGQVLDGDIDHFIEKMLL 216          
BLAST of mRNA_P-wetherbeei_contig729.1.1 vs. uniprot
Match: G4ZDJ3_PHYSP (RF_PROK_I domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZDJ3_PHYSP)

HSP 1 Score: 265 bits (678), Expect = 5.780e-84
Identity = 134/220 (60.91%), Postives = 162/220 (73.64%), Query Frame = 0
Query:    1 MYTRWCERRGFSVQEVASSPGEEAGVRSATVAVGGEAAFGWLRSEAGVHRLVRISPFDAGGRRHTSFAQVRVYPALEEREKSAADLPILDKDLRVETMRAQGAGGQHVNTTDSAVRITHIPTGLAASCQNERSQHRNRQVPDSAMRVLRGKLWARVEEERKRSRDDYAQGLGDNAWGNQIRSYVLAPYQMVKDHRTGQETGDVAAVLAGDLDPFVEAALV 220
            MY RW E RGF VQ V  S GEEAG RS  + + G  A+GW +SEAGVHRLVRISPFD+ GRRHTSFAQVRVYP   E  +S+ ++ I  KDLR++T R+ GAGGQHVNTTDSA+RITH+PTG+    Q+ERSQHRN+     A+ VLR KL+ R  +E  R +  +AQGLG+NAWGNQIRSYVL PYQ+VKDHRT    G+ A VL GD+D F+E  L+
Sbjct:  224 MYARWGEARGFQVQNVDESVGEEAGFRSVVLRLDGAYAYGWAKSEAGVHRLVRISPFDSAGRRHTSFAQVRVYPMAAE-GRSSEEIEISTKDLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVQSQSERSQHRNKA---EALAVLRAKLYQRKLDEEARKKQQFAQGLGENAWGNQIRSYVLYPYQLVKDHRTNYSEGNTAQVLDGDIDHFIEKMLL 439          
BLAST of mRNA_P-wetherbeei_contig729.1.1 vs. uniprot
Match: A0A140ECK2_9STRA (Mitochondrial peptide chain release factor 2 n=1 Tax=Vischeria sp. CAUP Q 202 TaxID=1805947 RepID=A0A140ECK2_9STRA)

HSP 1 Score: 265 bits (678), Expect = 8.760e-84
Identity = 136/221 (61.54%), Postives = 161/221 (72.85%), Query Frame = 0
Query:    1 MYTRWCERRGFSVQEVASSPGEEAGVRSATVAVGGEAAFGWLRSEAGVHRLVRISPFDAGGRRHTSFAQVRVYPALEEREKSAADLPILDKDLRVETMRAQGAGGQHVNTTDSAVRITHIPTGLAASCQNERSQHRNRQVPDSAMRVLRGKLWARVEEERKRSRDDYAQGLGDNAWGNQIRSYVLAPYQMVKDHRTGQETGDVAAVLAGDLDPFVEAALVA 221
            MYTRW E +GF VQ +  S GE  G+RS TV V G  A GW R+EAGVHRLVR+SPFDA  +RHTSFAQVRV+P       SA ++P   KDLR++T R+QGAGGQ VNTTDSAVR+ H+PTGL A+CQNERSQHRN+ +   A+ VLR KL    E + +R R  Y +GLGDN+WGNQIRSY L PYQ+VKDHRTG E G+V  VL GD+D  VE AL A
Sbjct:  238 MYTRWAEDKGFRVQSLHESVGEGGGLRSVTVKVDGHLAMGWFRTEAGVHRLVRMSPFDANKKRHTSFAQVRVFPESTSSSSSAVEIPA--KDLRIDTYRSQGAGGQSVNTTDSAVRVVHLPTGLVATCQNERSQHRNKAM---ALDVLRAKLARLQEAKDERERASYVEGLGDNSWGNQIRSYTLQPYQLVKDHRTGVEIGNVTRVLDGDIDELVEGALAA 453          
BLAST of mRNA_P-wetherbeei_contig729.1.1 vs. uniprot
Match: A0A2P4X072_9STRA (Peptide chain release factor 2 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X072_9STRA)

HSP 1 Score: 258 bits (660), Expect = 3.000e-83
Identity = 131/220 (59.55%), Postives = 160/220 (72.73%), Query Frame = 0
Query:    1 MYTRWCERRGFSVQEVASSPGEEAGVRSATVAVGGEAAFGWLRSEAGVHRLVRISPFDAGGRRHTSFAQVRVYPALEEREKSAADLPILDKDLRVETMRAQGAGGQHVNTTDSAVRITHIPTGLAASCQNERSQHRNRQVPDSAMRVLRGKLWARVEEERKRSRDDYAQGLGDNAWGNQIRSYVLAPYQMVKDHRTGQETGDVAAVLAGDLDPFVEAALV 220
            MY RW E RGF VQ    S G+EAG RS  + + G  A+GW +SEAGVHRLVRISPFD+ GRRHTSFAQVRVYP   E  +S  D+ IL KDLR++T R+ G GGQHVN+TDSA+RITH+PTG+    Q++RSQHRN+     AM +LR KL+ R  +E  +SR  +AQGLG+NAWGNQIRSYVL PYQ+VKDHRT    G+   VL GD+D F+E  L+
Sbjct:   64 MYARWGEARGFQVQYADESVGDEAGFRSVVLRLDGAYAYGWAKSEAGVHRLVRISPFDSAGRRHTSFAQVRVYPMATE-GRSNDDIEILTKDLRIDTFRSSGPGGQHVNSTDSAIRITHLPTGIVVQSQSDRSQHRNKA---EAMAMLRAKLYQRKLDEEVQSRQKFAQGLGENAWGNQIRSYVLHPYQLVKDHRTNYSEGNTGQVLDGDIDHFIEKMLL 279          
BLAST of mRNA_P-wetherbeei_contig729.1.1 vs. uniprot
Match: D0NMN6_PHYIT (Peptide chain release factor, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NMN6_PHYIT)

HSP 1 Score: 260 bits (664), Expect = 9.060e-83
Identity = 130/220 (59.09%), Postives = 163/220 (74.09%), Query Frame = 0
Query:    1 MYTRWCERRGFSVQEVASSPGEEAGVRSATVAVGGEAAFGWLRSEAGVHRLVRISPFDAGGRRHTSFAQVRVYPALEEREKSAADLPILDKDLRVETMRAQGAGGQHVNTTDSAVRITHIPTGLAASCQNERSQHRNRQVPDSAMRVLRGKLWARVEEERKRSRDDYAQGLGDNAWGNQIRSYVLAPYQMVKDHRTGQETGDVAAVLAGDLDPFVEAALV 220
            MY RW E RGF VQ V  S G+EAG RS  + + G  A+GW ++EAGVHRLVRISPFD+ GRRHTSFAQVRVYP   E  +S+A++ +  KDLR++T R+ G GGQHVN+TDSA+RITH+ TG+    Q++RSQHRN+     AM +LR KL+ R  EE  ++R  +AQGLGDNAWGNQIRSYVL PYQ+VKDHRT    G++A VL GD+D F+E  L+
Sbjct:  151 MYARWSEMRGFQVQYVDESVGDEAGFRSVVLKLDGVYAYGWAKNEAGVHRLVRISPFDSAGRRHTSFAQVRVYPMAAE-GRSSAEIEVSTKDLRIDTFRSSGPGGQHVNSTDSAIRITHLRTGIVVQSQSDRSQHRNKA---EAMAMLRAKLYQRKLEEEAKARQKFAQGLGDNAWGNQIRSYVLHPYQLVKDHRTNYSEGNIAQVLDGDIDRFIEKMLL 366          
BLAST of mRNA_P-wetherbeei_contig729.1.1 vs. uniprot
Match: H3GA21_PHYRM (RF_PROK_I domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GA21_PHYRM)

HSP 1 Score: 258 bits (659), Expect = 8.010e-82
Identity = 134/221 (60.63%), Postives = 159/221 (71.95%), Query Frame = 0
Query:    1 MYTRWCERRGFSVQEVASSPGEEAGVRSATVAVGGEAAFGWLRSEAGVHRLVRISPFDAGGRRHTSFAQVRVYP-ALEEREKSAADLPILDKDLRVETMRAQGAGGQHVNTTDSAVRITHIPTGLAASCQNERSQHRNRQVPDSAMRVLRGKLWARVEEERKRSRDDYAQGLGDNAWGNQIRSYVLAPYQMVKDHRTGQETGDVAAVLAGDLDPFVEAALV 220
            MY RW E RGF VQ V  S G+EAG RS  + + G  A+GW +SEAGVHRLVRISPFD+ GRRHTSFAQVRVYP A E R K   ++P   KDLR++T R+ G GGQHVN+TDSA+RITH+PTG+    Q++RSQHRN+     A+ +LR KL+ R  EE    R  +AQGLGDNAWGNQIRSYVL PYQMVKDHRT     + A VL GD+D FVE  L+
Sbjct:  165 MYARWGEARGFQVQHVDESVGDEAGFRSVVLRLDGAYAYGWAKSEAGVHRLVRISPFDSAGRRHTSFAQVRVYPMASEGRSKEEIEIPT--KDLRIDTFRSSGPGGQHVNSTDSAIRITHLPTGIVVQSQSDRSQHRNKA---EALAMLRAKLYQRKLEEEALKRQQFAQGLGDNAWGNQIRSYVLHPYQMVKDHRTNYSETNTAQVLDGDIDQFVEKMLL 380          
BLAST of mRNA_P-wetherbeei_contig729.1.1 vs. uniprot
Match: A0A2H5ZJH8_9BACT (Peptide chain release factor 2 n=1 Tax=bacterium HR30 TaxID=2035425 RepID=A0A2H5ZJH8_9BACT)

HSP 1 Score: 253 bits (646), Expect = 7.670e-81
Identity = 131/219 (59.82%), Postives = 162/219 (73.97%), Query Frame = 0
Query:    1 MYTRWCERRGFSVQEVASSPGEEAGVRSATVAVGGEAAFGWLRSEAGVHRLVRISPFDAGGRRHTSFAQVRVYPALEEREKSAADLPILDKDLRVETMRAQGAGGQHVNTTDSAVRITHIPTGLAASCQNERSQHRNRQVPDSAMRVLRGKLWARVEEERKRSRDDYAQGLGDNAWGNQIRSYVLAPYQMVKDHRTGQETGDVAAVLAGDLDPFVEAAL 219
            MY RW ERRGF  + +   PGE AG++SATVAV G  A+G+L++E GVHRLVRISPFDA  RRHTSFA V VYP L+E  + A D    +KDLR++T RA GAGGQHVN TDSAVRITHIPTG+  +CQNERSQH+N+ +   AMR+LR +L+    ++R+    + A+   + AWGNQIRSYVL PY++VKDHRTG E G+  AVL GDLD F+EA L
Sbjct:   95 MYLRWAERRGFKTEILDLQPGEGAGIKSATVAVEGPYAYGYLKAEVGVHRLVRISPFDANARRHTSFASVFVYPDLDEDIEVAID----EKDLRIDTFRASGAGGQHVNKTDSAVRITHIPTGIVVTCQNERSQHKNKSM---AMRILRARLYELELKKRQEQLAELAESQREIAWGNQIRSYVLQPYRLVKDHRTGVEVGNADAVLDGDLDAFIEAYL 306          
BLAST of mRNA_P-wetherbeei_contig729.1.1 vs. uniprot
Match: A0A421GPH8_9STRA (RF_PROK_I domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GPH8_9STRA)

HSP 1 Score: 254 bits (649), Expect = 8.380e-81
Identity = 129/220 (58.64%), Postives = 156/220 (70.91%), Query Frame = 0
Query:    1 MYTRWCERRGFSVQEVASSPGEEAGVRSATVAVGGEAAFGWLRSEAGVHRLVRISPFDAGGRRHTSFAQVRVYPALEEREKSAADLPILDKDLRVETMRAQGAGGQHVNTTDSAVRITHIPTGLAASCQNERSQHRNRQVPDSAMRVLRGKLWARVEEERKRSRDDYAQGLGDNAWGNQIRSYVLAPYQMVKDHRTGQETGDVAAVLAGDLDPFVEAALV 220
            MY RW E RGF V  V  S G+EAG RS  + + G  A+GW +SEAGVHRLVRISPFD  GRRHTSFAQVRVYP   E   S  ++ I  KDLR++T R+ G GGQHVNTTDSA+RITH+PTG+    Q++RSQHRN+     A+ +LR KL+ R  E++ R R  + QGLGDNAWG+QIRSYVL PYQMVKDHRT     + A VL GD+D F+E  L+
Sbjct:  126 MYGRWAEGRGFQVHNVDESVGDEAGFRSVVLRLDGAYAYGWTKSEAGVHRLVRISPFDTAGRRHTSFAQVRVYPMAPE-GGSKQEIEISTKDLRIDTFRSSGPGGQHVNTTDSAIRITHLPTGIVVQSQSDRSQHRNKA---EALAMLRAKLYQRELEDQARKRQQFTQGLGDNAWGSQIRSYVLHPYQMVKDHRTNYSESNTALVLDGDIDQFIEKMLL 341          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig729.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHB6_9PHAE1.230e-8963.80RF_PROK_I domain-containing protein n=2 Tax=Ectoca... [more]
W2QJH8_PHYPN6.110e-8560.91Peptide chain release factor 2 n=9 Tax=Phytophthor... [more]
A0A2P4XMB8_9STRA2.720e-8459.55Peptide chain release factor n=1 Tax=Phytophthora ... [more]
G4ZDJ3_PHYSP5.780e-8460.91RF_PROK_I domain-containing protein n=1 Tax=Phytop... [more]
A0A140ECK2_9STRA8.760e-8461.54Mitochondrial peptide chain release factor 2 n=1 T... [more]
A0A2P4X072_9STRA3.000e-8359.55Peptide chain release factor 2 n=1 Tax=Phytophthor... [more]
D0NMN6_PHYIT9.060e-8359.09Peptide chain release factor, putative n=2 Tax=Phy... [more]
H3GA21_PHYRM8.010e-8260.63RF_PROK_I domain-containing protein n=1 Tax=Phytop... [more]
A0A2H5ZJH8_9BACT7.670e-8159.82Peptide chain release factor 2 n=1 Tax=bacterium H... [more]
A0A421GPH8_9STRA8.380e-8158.64RF_PROK_I domain-containing protein n=2 Tax=Phytop... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005139Peptide chain release factorPFAMPF03462PCRFcoord: 1..70
e-value: 2.3E-25
score: 89.6
NoneNo IPR availableGENE3D3.30.70.1660coord: 1..216
e-value: 6.6E-79
score: 266.0
NoneNo IPR availableGENE3D3.30.160.20coord: 76..178
e-value: 6.6E-79
score: 266.0
NoneNo IPR availablePANTHERPTHR43116PEPTIDE CHAIN RELEASE FACTOR 2coord: 1..220
NoneNo IPR availablePANTHERPTHR43116:SF3PEPTIDE CHAIN RELEASE FACTOR PRFB1, CHLOROPLASTIC-RELATEDcoord: 1..220
IPR000352Peptide chain release factor class IPFAMPF00472RF-1coord: 86..195
e-value: 8.5E-33
score: 112.7
IPR000352Peptide chain release factor class IPROSITEPS00745RF_PROK_Icoord: 99..115
IPR045853Peptide chain release factor class I superfamilySUPERFAMILY75620Release factorcoord: 1..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig729contigP-wetherbeei_contig729:137..1968 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig729.1.1mRNA_P-wetherbeei_contig729.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig729 137..1968 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig729.1.1 ID=prot_P-wetherbeei_contig729.1.1|Name=mRNA_P-wetherbeei_contig729.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=224bp
MYTRWCERRGFSVQEVASSPGEEAGVRSATVAVGGEAAFGWLRSEAGVHR
LVRISPFDAGGRRHTSFAQVRVYPALEEREKSAADLPILDKDLRVETMRA
QGAGGQHVNTTDSAVRITHIPTGLAASCQNERSQHRNRQVPDSAMRVLRG
KLWARVEEERKRSRDDYAQGLGDNAWGNQIRSYVLAPYQMVKDHRTGQET
GDVAAVLAGDLDPFVEAALVAGL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005139PCRF
IPR000352Pep_chain_release_fac_I
IPR045853Pep_chain_release_fac_I_sf