mRNA_P-wetherbeei_contig729.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig729.1.1
Unique NamemRNA_P-wetherbeei_contig729.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig729.1.1 vs. uniprot
Match: A0A6H5JHB6_9PHAE (RF_PROK_I domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JHB6_9PHAE)

HSP 1 Score: 280 bits (717), Expect = 1.230e-89
Identity = 141/221 (63.80%), Postives = 175/221 (79.19%), Query Frame = 1
Query:    1 MYTRWCERRGFSVQEVASSPGEEAGVRSATVAVGGEAAFGWLRSEAGVHRLVRISPFDAGGRRHTSFAQVRVYPALEEREKSAADLPILDKDLRVETMRAQGAGGQHVNTTDSAVRITHIPTGLAASCQNERSQHRNRQVPDSAMRVLRGKLWARVEEERKRSRDDYAQGLGDNAWGNQIRSYVLAPYQMVKDHRTGQETGDVAAVLAGDLDPFVEAALVA 663
            MYTRW E + F+++ + SSPG+EAG+RS  V V GE+A+GWLRSEAGVHRLVR SP+D  GRRHTSF+QVRV+P        AA + I  KDL+V+TMRAQGAGGQHVNTTDSAVR+TH+PTGL A  Q++RSQH+NR   ++AMR LR K++ R EEER   R++YA GLGDNA+GNQIRSYVL+PYQMVKDHRTG++ GDV+ VL      F++AAL+A
Sbjct:  240 MYTRWAETKAFTLRPLNSSPGDEAGLRSVMVFVEGESAYGWLRSEAGVHRLVRNSPYDPNGRRHTSFSQVRVFPEAGGESGDAAKVEIPAKDLKVDTMRAQGAGGQHVNTTDSAVRLTHLPTGLVALSQSDRSQHKNR---ENAMRALRAKIFQREEEERHAKRNEYAAGLGDNAFGNQIRSYVLSPYQMVKDHRTGKQEGDVSGVLDXXXXXFIDAALIA 457          
BLAST of mRNA_P-wetherbeei_contig729.1.1 vs. uniprot
Match: W2QJH8_PHYPN (Peptide chain release factor 2 n=9 Tax=Phytophthora TaxID=4783 RepID=W2QJH8_PHYPN)

HSP 1 Score: 268 bits (684), Expect = 6.110e-85
Identity = 134/220 (60.91%), Postives = 164/220 (74.55%), Query Frame = 1
Query:    1 MYTRWCERRGFSVQEVASSPGEEAGVRSATVAVGGEAAFGWLRSEAGVHRLVRISPFDAGGRRHTSFAQVRVYPALEEREKSAADLPILDKDLRVETMRAQGAGGQHVNTTDSAVRITHIPTGLAASCQNERSQHRNRQVPDSAMRVLRGKLWARVEEERKRSRDDYAQGLGDNAWGNQIRSYVLAPYQMVKDHRTGQETGDVAAVLAGDLDPFVEAALV 660
            MY RW E RGF VQ V  S GEEAG RS  + + G  A+GW +SEAGVHRLVRISPFD+ GRRHTSFAQVRVYP   E  +S+A++ + +KDLR++T R+ G GGQHVN+TDSA+RITH+PTG+    Q++RSQHRN+     AM +LR KL+ R  EE  R+R  +AQGLGDNAWGNQIRSYVL PYQ+VKDHRT    G+ A VL GD+D F+E  L+
Sbjct:  220 MYARWGEARGFQVQFVDESAGEEAGFRSVVLRLDGAYAYGWAKSEAGVHRLVRISPFDSAGRRHTSFAQVRVYPMAAE-GRSSAEIEVSNKDLRIDTFRSSGPGGQHVNSTDSAIRITHLPTGIVVQSQSDRSQHRNKA---EAMAILRAKLYQRKLEEEARARQQFAQGLGDNAWGNQIRSYVLHPYQLVKDHRTNYSEGNTAQVLDGDIDQFIEKMLL 435          
BLAST of mRNA_P-wetherbeei_contig729.1.1 vs. uniprot
Match: A0A2P4XMB8_9STRA (Peptide chain release factor n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XMB8_9STRA)

HSP 1 Score: 259 bits (661), Expect = 2.720e-84
Identity = 131/220 (59.55%), Postives = 160/220 (72.73%), Query Frame = 1
Query:    1 MYTRWCERRGFSVQEVASSPGEEAGVRSATVAVGGEAAFGWLRSEAGVHRLVRISPFDAGGRRHTSFAQVRVYPALEEREKSAADLPILDKDLRVETMRAQGAGGQHVNTTDSAVRITHIPTGLAASCQNERSQHRNRQVPDSAMRVLRGKLWARVEEERKRSRDDYAQGLGDNAWGNQIRSYVLAPYQMVKDHRTGQETGDVAAVLAGDLDPFVEAALV 660
            MY RW E RGF VQ    S G+EAG RS  + + G  A+GW +SEAGVHRLVRISPFD+ GRRHTSFAQVRVYP   E  +S  D+ IL KDLR++T R+ G GGQHVN+TDSA+RITH+PTG+    Q++RSQHRN+     AM +LR KL+ R  +E  +SR  +AQGLG+NAWGNQIRSYVL PYQ+VKDHRT    G+   VL GD+D F+E  L+
Sbjct:    1 MYARWGEARGFQVQYADESVGDEAGFRSVVLRLDGAYAYGWAKSEAGVHRLVRISPFDSAGRRHTSFAQVRVYPMATE-GRSNEDIEILTKDLRIDTFRSSGPGGQHVNSTDSAIRITHLPTGIVVQSQSDRSQHRNKA---EAMAMLRAKLYQRKLDEEVQSRQKFAQGLGENAWGNQIRSYVLHPYQLVKDHRTNYSEGNTGQVLDGDIDHFIEKMLL 216          
BLAST of mRNA_P-wetherbeei_contig729.1.1 vs. uniprot
Match: G4ZDJ3_PHYSP (RF_PROK_I domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZDJ3_PHYSP)

HSP 1 Score: 265 bits (678), Expect = 5.780e-84
Identity = 134/220 (60.91%), Postives = 162/220 (73.64%), Query Frame = 1
Query:    1 MYTRWCERRGFSVQEVASSPGEEAGVRSATVAVGGEAAFGWLRSEAGVHRLVRISPFDAGGRRHTSFAQVRVYPALEEREKSAADLPILDKDLRVETMRAQGAGGQHVNTTDSAVRITHIPTGLAASCQNERSQHRNRQVPDSAMRVLRGKLWARVEEERKRSRDDYAQGLGDNAWGNQIRSYVLAPYQMVKDHRTGQETGDVAAVLAGDLDPFVEAALV 660
            MY RW E RGF VQ V  S GEEAG RS  + + G  A+GW +SEAGVHRLVRISPFD+ GRRHTSFAQVRVYP   E  +S+ ++ I  KDLR++T R+ GAGGQHVNTTDSA+RITH+PTG+    Q+ERSQHRN+     A+ VLR KL+ R  +E  R +  +AQGLG+NAWGNQIRSYVL PYQ+VKDHRT    G+ A VL GD+D F+E  L+
Sbjct:  224 MYARWGEARGFQVQNVDESVGEEAGFRSVVLRLDGAYAYGWAKSEAGVHRLVRISPFDSAGRRHTSFAQVRVYPMAAE-GRSSEEIEISTKDLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVQSQSERSQHRNKA---EALAVLRAKLYQRKLDEEARKKQQFAQGLGENAWGNQIRSYVLYPYQLVKDHRTNYSEGNTAQVLDGDIDHFIEKMLL 439          
BLAST of mRNA_P-wetherbeei_contig729.1.1 vs. uniprot
Match: A0A140ECK2_9STRA (Mitochondrial peptide chain release factor 2 n=1 Tax=Vischeria sp. CAUP Q 202 TaxID=1805947 RepID=A0A140ECK2_9STRA)

HSP 1 Score: 265 bits (678), Expect = 8.760e-84
Identity = 136/221 (61.54%), Postives = 161/221 (72.85%), Query Frame = 1
Query:    1 MYTRWCERRGFSVQEVASSPGEEAGVRSATVAVGGEAAFGWLRSEAGVHRLVRISPFDAGGRRHTSFAQVRVYPALEEREKSAADLPILDKDLRVETMRAQGAGGQHVNTTDSAVRITHIPTGLAASCQNERSQHRNRQVPDSAMRVLRGKLWARVEEERKRSRDDYAQGLGDNAWGNQIRSYVLAPYQMVKDHRTGQETGDVAAVLAGDLDPFVEAALVA 663
            MYTRW E +GF VQ +  S GE  G+RS TV V G  A GW R+EAGVHRLVR+SPFDA  +RHTSFAQVRV+P       SA ++P   KDLR++T R+QGAGGQ VNTTDSAVR+ H+PTGL A+CQNERSQHRN+ +   A+ VLR KL    E + +R R  Y +GLGDN+WGNQIRSY L PYQ+VKDHRTG E G+V  VL GD+D  VE AL A
Sbjct:  238 MYTRWAEDKGFRVQSLHESVGEGGGLRSVTVKVDGHLAMGWFRTEAGVHRLVRMSPFDANKKRHTSFAQVRVFPESTSSSSSAVEIPA--KDLRIDTYRSQGAGGQSVNTTDSAVRVVHLPTGLVATCQNERSQHRNKAM---ALDVLRAKLARLQEAKDERERASYVEGLGDNSWGNQIRSYTLQPYQLVKDHRTGVEIGNVTRVLDGDIDELVEGALAA 453          
BLAST of mRNA_P-wetherbeei_contig729.1.1 vs. uniprot
Match: A0A2P4X072_9STRA (Peptide chain release factor 2 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X072_9STRA)

HSP 1 Score: 258 bits (660), Expect = 3.000e-83
Identity = 131/220 (59.55%), Postives = 160/220 (72.73%), Query Frame = 1
Query:    1 MYTRWCERRGFSVQEVASSPGEEAGVRSATVAVGGEAAFGWLRSEAGVHRLVRISPFDAGGRRHTSFAQVRVYPALEEREKSAADLPILDKDLRVETMRAQGAGGQHVNTTDSAVRITHIPTGLAASCQNERSQHRNRQVPDSAMRVLRGKLWARVEEERKRSRDDYAQGLGDNAWGNQIRSYVLAPYQMVKDHRTGQETGDVAAVLAGDLDPFVEAALV 660
            MY RW E RGF VQ    S G+EAG RS  + + G  A+GW +SEAGVHRLVRISPFD+ GRRHTSFAQVRVYP   E  +S  D+ IL KDLR++T R+ G GGQHVN+TDSA+RITH+PTG+    Q++RSQHRN+     AM +LR KL+ R  +E  +SR  +AQGLG+NAWGNQIRSYVL PYQ+VKDHRT    G+   VL GD+D F+E  L+
Sbjct:   64 MYARWGEARGFQVQYADESVGDEAGFRSVVLRLDGAYAYGWAKSEAGVHRLVRISPFDSAGRRHTSFAQVRVYPMATE-GRSNDDIEILTKDLRIDTFRSSGPGGQHVNSTDSAIRITHLPTGIVVQSQSDRSQHRNKA---EAMAMLRAKLYQRKLDEEVQSRQKFAQGLGENAWGNQIRSYVLHPYQLVKDHRTNYSEGNTGQVLDGDIDHFIEKMLL 279          
BLAST of mRNA_P-wetherbeei_contig729.1.1 vs. uniprot
Match: D0NMN6_PHYIT (Peptide chain release factor, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NMN6_PHYIT)

HSP 1 Score: 260 bits (664), Expect = 9.060e-83
Identity = 130/220 (59.09%), Postives = 163/220 (74.09%), Query Frame = 1
Query:    1 MYTRWCERRGFSVQEVASSPGEEAGVRSATVAVGGEAAFGWLRSEAGVHRLVRISPFDAGGRRHTSFAQVRVYPALEEREKSAADLPILDKDLRVETMRAQGAGGQHVNTTDSAVRITHIPTGLAASCQNERSQHRNRQVPDSAMRVLRGKLWARVEEERKRSRDDYAQGLGDNAWGNQIRSYVLAPYQMVKDHRTGQETGDVAAVLAGDLDPFVEAALV 660
            MY RW E RGF VQ V  S G+EAG RS  + + G  A+GW ++EAGVHRLVRISPFD+ GRRHTSFAQVRVYP   E  +S+A++ +  KDLR++T R+ G GGQHVN+TDSA+RITH+ TG+    Q++RSQHRN+     AM +LR KL+ R  EE  ++R  +AQGLGDNAWGNQIRSYVL PYQ+VKDHRT    G++A VL GD+D F+E  L+
Sbjct:  151 MYARWSEMRGFQVQYVDESVGDEAGFRSVVLKLDGVYAYGWAKNEAGVHRLVRISPFDSAGRRHTSFAQVRVYPMAAE-GRSSAEIEVSTKDLRIDTFRSSGPGGQHVNSTDSAIRITHLRTGIVVQSQSDRSQHRNKA---EAMAMLRAKLYQRKLEEEAKARQKFAQGLGDNAWGNQIRSYVLHPYQLVKDHRTNYSEGNIAQVLDGDIDRFIEKMLL 366          
BLAST of mRNA_P-wetherbeei_contig729.1.1 vs. uniprot
Match: H3GA21_PHYRM (RF_PROK_I domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GA21_PHYRM)

HSP 1 Score: 258 bits (659), Expect = 8.010e-82
Identity = 134/221 (60.63%), Postives = 159/221 (71.95%), Query Frame = 1
Query:    1 MYTRWCERRGFSVQEVASSPGEEAGVRSATVAVGGEAAFGWLRSEAGVHRLVRISPFDAGGRRHTSFAQVRVYP-ALEEREKSAADLPILDKDLRVETMRAQGAGGQHVNTTDSAVRITHIPTGLAASCQNERSQHRNRQVPDSAMRVLRGKLWARVEEERKRSRDDYAQGLGDNAWGNQIRSYVLAPYQMVKDHRTGQETGDVAAVLAGDLDPFVEAALV 660
            MY RW E RGF VQ V  S G+EAG RS  + + G  A+GW +SEAGVHRLVRISPFD+ GRRHTSFAQVRVYP A E R K   ++P   KDLR++T R+ G GGQHVN+TDSA+RITH+PTG+    Q++RSQHRN+     A+ +LR KL+ R  EE    R  +AQGLGDNAWGNQIRSYVL PYQMVKDHRT     + A VL GD+D FVE  L+
Sbjct:  165 MYARWGEARGFQVQHVDESVGDEAGFRSVVLRLDGAYAYGWAKSEAGVHRLVRISPFDSAGRRHTSFAQVRVYPMASEGRSKEEIEIPT--KDLRIDTFRSSGPGGQHVNSTDSAIRITHLPTGIVVQSQSDRSQHRNKA---EALAMLRAKLYQRKLEEEALKRQQFAQGLGDNAWGNQIRSYVLHPYQMVKDHRTNYSETNTAQVLDGDIDQFVEKMLL 380          
BLAST of mRNA_P-wetherbeei_contig729.1.1 vs. uniprot
Match: A0A2H5ZJH8_9BACT (Peptide chain release factor 2 n=1 Tax=bacterium HR30 TaxID=2035425 RepID=A0A2H5ZJH8_9BACT)

HSP 1 Score: 253 bits (646), Expect = 7.670e-81
Identity = 131/219 (59.82%), Postives = 162/219 (73.97%), Query Frame = 1
Query:    1 MYTRWCERRGFSVQEVASSPGEEAGVRSATVAVGGEAAFGWLRSEAGVHRLVRISPFDAGGRRHTSFAQVRVYPALEEREKSAADLPILDKDLRVETMRAQGAGGQHVNTTDSAVRITHIPTGLAASCQNERSQHRNRQVPDSAMRVLRGKLWARVEEERKRSRDDYAQGLGDNAWGNQIRSYVLAPYQMVKDHRTGQETGDVAAVLAGDLDPFVEAAL 657
            MY RW ERRGF  + +   PGE AG++SATVAV G  A+G+L++E GVHRLVRISPFDA  RRHTSFA V VYP L+E  + A D    +KDLR++T RA GAGGQHVN TDSAVRITHIPTG+  +CQNERSQH+N+ +   AMR+LR +L+    ++R+    + A+   + AWGNQIRSYVL PY++VKDHRTG E G+  AVL GDLD F+EA L
Sbjct:   95 MYLRWAERRGFKTEILDLQPGEGAGIKSATVAVEGPYAYGYLKAEVGVHRLVRISPFDANARRHTSFASVFVYPDLDEDIEVAID----EKDLRIDTFRASGAGGQHVNKTDSAVRITHIPTGIVVTCQNERSQHKNKSM---AMRILRARLYELELKKRQEQLAELAESQREIAWGNQIRSYVLQPYRLVKDHRTGVEVGNADAVLDGDLDAFIEAYL 306          
BLAST of mRNA_P-wetherbeei_contig729.1.1 vs. uniprot
Match: A0A421GPH8_9STRA (RF_PROK_I domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GPH8_9STRA)

HSP 1 Score: 254 bits (649), Expect = 8.380e-81
Identity = 129/220 (58.64%), Postives = 156/220 (70.91%), Query Frame = 1
Query:    1 MYTRWCERRGFSVQEVASSPGEEAGVRSATVAVGGEAAFGWLRSEAGVHRLVRISPFDAGGRRHTSFAQVRVYPALEEREKSAADLPILDKDLRVETMRAQGAGGQHVNTTDSAVRITHIPTGLAASCQNERSQHRNRQVPDSAMRVLRGKLWARVEEERKRSRDDYAQGLGDNAWGNQIRSYVLAPYQMVKDHRTGQETGDVAAVLAGDLDPFVEAALV 660
            MY RW E RGF V  V  S G+EAG RS  + + G  A+GW +SEAGVHRLVRISPFD  GRRHTSFAQVRVYP   E   S  ++ I  KDLR++T R+ G GGQHVNTTDSA+RITH+PTG+    Q++RSQHRN+     A+ +LR KL+ R  E++ R R  + QGLGDNAWG+QIRSYVL PYQMVKDHRT     + A VL GD+D F+E  L+
Sbjct:  126 MYGRWAEGRGFQVHNVDESVGDEAGFRSVVLRLDGAYAYGWTKSEAGVHRLVRISPFDTAGRRHTSFAQVRVYPMAPE-GGSKQEIEISTKDLRIDTFRSSGPGGQHVNTTDSAIRITHLPTGIVVQSQSDRSQHRNKA---EALAMLRAKLYQRELEDQARKRQQFTQGLGDNAWGSQIRSYVLHPYQMVKDHRTNYSESNTALVLDGDIDQFIEKMLL 341          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig729.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHB6_9PHAE1.230e-8963.80RF_PROK_I domain-containing protein n=2 Tax=Ectoca... [more]
W2QJH8_PHYPN6.110e-8560.91Peptide chain release factor 2 n=9 Tax=Phytophthor... [more]
A0A2P4XMB8_9STRA2.720e-8459.55Peptide chain release factor n=1 Tax=Phytophthora ... [more]
G4ZDJ3_PHYSP5.780e-8460.91RF_PROK_I domain-containing protein n=1 Tax=Phytop... [more]
A0A140ECK2_9STRA8.760e-8461.54Mitochondrial peptide chain release factor 2 n=1 T... [more]
A0A2P4X072_9STRA3.000e-8359.55Peptide chain release factor 2 n=1 Tax=Phytophthor... [more]
D0NMN6_PHYIT9.060e-8359.09Peptide chain release factor, putative n=2 Tax=Phy... [more]
H3GA21_PHYRM8.010e-8260.63RF_PROK_I domain-containing protein n=1 Tax=Phytop... [more]
A0A2H5ZJH8_9BACT7.670e-8159.82Peptide chain release factor 2 n=1 Tax=bacterium H... [more]
A0A421GPH8_9STRA8.380e-8158.64RF_PROK_I domain-containing protein n=2 Tax=Phytop... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig729contigP-wetherbeei_contig729:137..1968 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LKZ9
PFAMsPCRF,RF-1
Model size672
Max annot lvl2759|Eukaryota
KEGG koko:K02836
Hectar predicted targeting categoryother localisation
Exons5
Evalue9.5e-94
EggNOG OGsCOG0216@1|root,KOG2726@2759|Eukaryota
Ec32 ortholog descriptionPeptide chain release factor
Ec32 orthologEc-11_006160.1
Descriptiontranslation release factor activity
Cds size672
COG categoryJ
BRITEko00000,ko03012
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186970.3870883-CDS-P-wetherbeei_contig729:136..3431683186970.3870883-CDS-P-wetherbeei_contig729:136..343Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig729 137..343 +
1683186970.3962626-CDS-P-wetherbeei_contig729:657..7681683186970.3962626-CDS-P-wetherbeei_contig729:657..768Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig729 658..768 +
1683186970.4041758-CDS-P-wetherbeei_contig729:1127..12311683186970.4041758-CDS-P-wetherbeei_contig729:1127..1231Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig729 1128..1231 +
1683186970.4149606-CDS-P-wetherbeei_contig729:1466..15861683186970.4149606-CDS-P-wetherbeei_contig729:1466..1586Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig729 1467..1586 +
1683186970.4255033-CDS-P-wetherbeei_contig729:1838..19681683186970.4255033-CDS-P-wetherbeei_contig729:1838..1968Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig729 1839..1968 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig729.1.1prot_P-wetherbeei_contig729.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig729 137..1968 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig729.1.1

>prot_P-wetherbeei_contig729.1.1 ID=prot_P-wetherbeei_contig729.1.1|Name=mRNA_P-wetherbeei_contig729.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=224bp
MYTRWCERRGFSVQEVASSPGEEAGVRSATVAVGGEAAFGWLRSEAGVHR
LVRISPFDAGGRRHTSFAQVRVYPALEEREKSAADLPILDKDLRVETMRA
QGAGGQHVNTTDSAVRITHIPTGLAASCQNERSQHRNRQVPDSAMRVLRG
KLWARVEEERKRSRDDYAQGLGDNAWGNQIRSYVLAPYQMVKDHRTGQET
GDVAAVLAGDLDPFVEAALVAGL*
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mRNA from alignment at P-wetherbeei_contig729:137..1968+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig729.1.1 ID=mRNA_P-wetherbeei_contig729.1.1|Name=mRNA_P-wetherbeei_contig729.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1832bp|location=Sequence derived from alignment at P-wetherbeei_contig729:137..1968+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTACACGCGTTGGTGCGAACGGCGGGGCTTCTCAGTGCAGGAGGTGGC GAGCAGCCCCGGGGAGGAGGCAGGCGTCCGCAGCGCCACTGTGGCTGTGG GTGGCGAGGCGGCCTTCGGGTGGCTGCGCTCCGAGGCCGGCGTGCACCGC CTCGTGCGGATATCGCCGTTTGATGCCGGGGGCCGCCGGCACACTTCCTT TGCGCAGGTGTGGAAAAGGATGTGTTGTTCCCGCTGCTGTTTTCCCTCTG CGCGGCCTGGCTGAGCGCTGTTACTGTTCGTTCCTTTTATGCGACGTCTT CAACGTTCCGGTATTCGGCTTTTTTCCCAATCGGGCTCGCAGGTGTAGGT TCTTTTCAGGTGAGACGGCTCTTCTGTTTCGAGGGCTTCACTTGGTTTTA CTTGCGTTTCCGTTTTATACGCTTGCCGCTTCCATGCTTCACTCTTGGGG GTGTTCCAGTTCACGAGCGGGCTTCTACCCTTCTTCCCCCAAATCTCTGC TCTTCTCTCCTCTGCGCGCAGGTGCGCGTGTACCCGGCGCTGGAGGAGCG AGAGAAGAGCGCGGCCGACCTACCTATCCTCGACAAGGATCTCCGCGTGG AGACCATGCGGGCCCAAGGCGCCGGCGGACAGGTGCAATGATTGGTACCA GGGACTATTTATTGGTTTGTATTTTCAGTAGACAGAAGCGAGCACTTTTC AGTTAGATCTTGGAGCGCGTCCTTCTTCCACCGGTTGTTGTCTCTTGTAA CTGTTAGTATTATCTGGCGCAATGGTTTTTCAGGTTATGGCTTCCTGCTC ATATGCTTCAGCAACCGCTTTCAGAAAAGTCTTAACGGCCGCGGCTTGTG TTCCTTTCGGTTTCAAGGAGGTGAAATGGGCGAATGGTTGATTCTGTTTG AGCTCAAGAAAACAGAAGAGATCGCTGCTGGACTGACGTGGGATGCTCAT CTCGCTCTGTGGCCCGCATGCTTTCGTCCGTGCCCCTGCAGCACGTTAAC ACGACGGACAGCGCGGTACGGATCACGCACATCCCAACGGGCCTGGCGGC GTCGTGCCAGAACGAGCGCTCCCAGCACCGCAACAGGCAAGTTCCGTTTC TGCGGCAGCTTTAAGGTAGGGTTGACATTGCTTTAAATTGCCAATGCCGA AATAACGGGCATTGACGTCGTTTCTCCAATCTCTCCAGGATCAGCTTTTC GCGGGTAAAACAATTTGGTTAGCTTCGAAATGGCGGCTCCATCAGCCTTT GCCGCGAGCGCCCCATTCCCGACCTCCTTACTGAGTTCTTTCCTGCCTTC GAAATTCGTTCCGTGCTTTCCACGATTCAGGGATTCGGCGATGCGTGTGC TGCGCGGCAAGCTGTGGGCACGAGTCGAGGAGGAGCGGAAGCGGAGCCGC GATGACTATGCACAAGGCCTTGGCGACAACGCATGGGGCAATCAAATTCG GTGCGTTCGTTTGGGAGCGAAATGAAGGATTGGAGAGTTGTCATTTTTTC TTTTGAATGCAGGTTGCCCAAGAACGCTCTAGCTATGGGGGCATCTGGCG GCCGCGCTGACTTGCCCACTTTTTGGGGGCCGTGTGAAGTAGAAGCGGCG ACGGCCCACAGTTTCCTCCCATTCTTTTTCCGCTGTACCCTTTCCCTTTC CTTGCCGGCTGTGCTTTTGGGCATGTGGCGGTGAAAACGACAAATCACGC AGATCGTACGTATTGGCGCCGTACCAGATGGTGAAGGACCACCGCACGGG CCAGGAGACCGGCGACGTGGCGGCCGTGCTCGCCGGCGACCTCGACCCTT TCGTGGAGGCCGCCCTTGTTGCCGGTTTGTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig729:137..1968+

>mRNA_P-wetherbeei_contig729.1.1 ID=mRNA_P-wetherbeei_contig729.1.1|Name=mRNA_P-wetherbeei_contig729.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=672bp|location=Sequence derived from alignment at P-wetherbeei_contig729:137..1968+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTACACGCGTTGGTGCGAACGGCGGGGCTTCTCAGTGCAGGAGGTGGC
GAGCAGCCCCGGGGAGGAGGCAGGCGTCCGCAGCGCCACTGTGGCTGTGG
GTGGCGAGGCGGCCTTCGGGTGGCTGCGCTCCGAGGCCGGCGTGCACCGC
CTCGTGCGGATATCGCCGTTTGATGCCGGGGGCCGCCGGCACACTTCCTT
TGCGCAGGTGCGCGTGTACCCGGCGCTGGAGGAGCGAGAGAAGAGCGCGG
CCGACCTACCTATCCTCGACAAGGATCTCCGCGTGGAGACCATGCGGGCC
CAAGGCGCCGGCGGACAGCACGTTAACACGACGGACAGCGCGGTACGGAT
CACGCACATCCCAACGGGCCTGGCGGCGTCGTGCCAGAACGAGCGCTCCC
AGCACCGCAACAGGCAAGTTCCGGATTCGGCGATGCGTGTGCTGCGCGGC
AAGCTGTGGGCACGAGTCGAGGAGGAGCGGAAGCGGAGCCGCGATGACTA
TGCACAAGGCCTTGGCGACAACGCATGGGGCAATCAAATTCGATCGTACG
TATTGGCGCCGTACCAGATGGTGAAGGACCACCGCACGGGCCAGGAGACC
GGCGACGTGGCGGCCGTGCTCGCCGGCGACCTCGACCCTTTCGTGGAGGC
CGCCCTTGTTGCCGGTTTGTAA
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