prot_P-wetherbeei_contig7257.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7257.1.1
Unique Nameprot_P-wetherbeei_contig7257.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length93
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig7257.1.1 vs. uniprot
Match: A0A836CKX7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKX7_9STRA)

HSP 1 Score: 113 bits (283), Expect = 2.630e-27
Identity = 61/93 (65.59%), Postives = 74/93 (79.57%), Query Frame = 0 
Query:    1 RVAVSKQQLAWEGISATLGALFGRMKDLEVNRRVAIRKGLLAILQRQDEMLRGLPPLKDPVLQVLERINTDRRFLDAEIRESMRS-GAARIKV 92
            RVAV++Q  A +  SA LGALFG MKDLEVNRR AIR  LL++LQ QD + R LP LKDPVLQVLERINTDRRFLD E+R++MR+  AA+++ 
Sbjct:  263 RVAVTQQLAACDAASAQLGALFGHMKDLEVNRRTAIRNALLSLLQAQDLVWRQLPILKDPVLQVLERINTDRRFLDGEVRDAMRTLSAAKLRT 355
[Close]
BLAST of mRNA_P-wetherbeei_contig7257.1.1 vs. uniprot
Match: A0A6H5KEN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEN9_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 1.630e-26
Identity = 55/93 (59.14%), Postives = 69/93 (74.19%), Query Frame = 0 
Query:    1 RVAVSKQQLAWEGISATLGALFGRMKDLEVNRRVAIRKGLLAILQRQDEMLRGLPPLKDPVLQVLERINTDRRFLDAEIRESMRSGAARIKVG 93
            RVAV++Q   W+G+SA LG LFG+MKD+EV RR AI+ GL A++Q QD + R LP LKDPVL  L+RIN DR  LD E+R+ MR GAAR+  G
Sbjct:  365 RVAVTQQARVWKGVSAKLGDLFGKMKDIEVERRKAIQGGLTAMVQLQDALWRDLPALKDPVLHTLDRINVDRHLLDQEVRQQMRVGAARLLAG 457
[Close]
BLAST of mRNA_P-wetherbeei_contig7257.1.1 vs. uniprot
Match: D8LNW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNW9_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 8.060e-26
Identity = 54/93 (58.06%), Postives = 69/93 (74.19%), Query Frame = 0 
Query:    1 RVAVSKQQLAWEGISATLGALFGRMKDLEVNRRVAIRKGLLAILQRQDEMLRGLPPLKDPVLQVLERINTDRRFLDAEIRESMRSGAARIKVG 93
            RVAV++Q   W+G+SA LG LFGRMKD+EV RR AI+ GL A++Q QD + R LP LK+PV+  L+RIN DR  LD E+R+ MR GAAR+  G
Sbjct:  323 RVAVTQQARVWKGVSAKLGDLFGRMKDIEVERRKAIQGGLTAMVQLQDALWRDLPALKEPVVHTLDRINVDRHLLDQEVRQQMRVGAARLLAG 415
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7257.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A836CKX7_9STRA2.630e-2765.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KEN9_9PHAE1.630e-2659.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNW9_ECTSI8.060e-2658.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7257contigP-wetherbeei_contig7257:1650..2633 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7257.1.1mRNA_P-wetherbeei_contig7257.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7257 1650..2633 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7257.1.1 ID=prot_P-wetherbeei_contig7257.1.1|Name=mRNA_P-wetherbeei_contig7257.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=93bp
RVAVSKQQLAWEGISATLGALFGRMKDLEVNRRVAIRKGLLAILQRQDEM
LRGLPPLKDPVLQVLERINTDRRFLDAEIRESMRSGAARIKVG
back to top