prot_P-wetherbeei_contig7163.5.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7163.5.1
Unique Nameprot_P-wetherbeei_contig7163.5.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length336
Homology
BLAST of mRNA_P-wetherbeei_contig7163.5.1 vs. uniprot
Match: A0A836CC40_9STRA (TFIIE alpha subunit-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC40_9STRA)

HSP 1 Score: 235 bits (599), Expect = 8.340e-69
Identity = 141/348 (40.52%), Postives = 179/348 (51.44%), Query Frame = 0
Query:    1 MTAVVRAFYEDPYIVVVDALIREKYLKDKEEELGARVNLRHKQVRAVLAALEREGLVQQESISDVIGGTRMSNYWYIDYRRAVDSIRLRIYLMQKRLKDMESKALLDTTYECPQCQATYDLLAVQQLRNAANSFCCSHCCDQDEHSLCGPAPYMLVDQNNRGRLEAFECGRHELNEQLRRSTSADCPREGIFELLS----------------------------------------------------------------ELRDAAVPSTLPSELRARGVGGAY--GQGXXXXXXXXXXXXXXXXXXXXXXXXXAGPSVSGQRMEVLYAHNAAGQEIVVEIEEDSDAE 282
            ++ VVRAF++D  ++V+D LIREKYLKDK+++LGAR+ L+ KQVRAVLA LEREGL +QE + D   G R +NYWY+DYR AV+ IRLR YLMQ+RLK+ E   L   TY CPQC AT+ +L +Q+L N A  FCCSHCC+ D H  C   P+ L D +NR RL        EL EQL  S +  C R G+++L+                                                                 +L D  VPS LPSELRARGVGG      G                          G   S + +++LYA NAAG E+VVEIE DSDA+
Sbjct:   20 VSTVVRAFFDDDAVLVIDTLIREKYLKDKDDDLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGGRKANYWYVDYRHAVNVIRLRTYLMQRRLKEAERAELARQTYACPQCGATFGVLEIQKLVNGARGFCCSHCCEMDTHETCARGPHSLRDFDNRERLATVTRALRELKEQLSASAAPGCARAGVYDLVXXXXXXXXXXXXXXXXXXXXXXXXXESRGXXXXXXXXXXXXXXXXVYDLVKEAVRAXXXXXXXXXQLHDKPVPSNLPSELRARGVGGGARGSHGASKLARFRDDRFSLHAGYAAGTKGGDGAHGSNRAVDLLYARNAAGYEVVVEIESDSDAD 367          
BLAST of mRNA_P-wetherbeei_contig7163.5.1 vs. uniprot
Match: A0A6H5LCE2_9PHAE (HTH TFE/IIEalpha-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCE2_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 8.090e-58
Identity = 122/284 (42.96%), Postives = 163/284 (57.39%), Query Frame = 0
Query:    1 MTAVVRAFYEDPYIVVVDALIREKYLKDKEEELGARVNLRHKQVRAVLAALEREGLVQQESISDVIGGTRMSNYWYIDYRRAVDSIRLRIYLMQKRLKD-MESKALLDT--TYECPQCQATYDLLAVQQLRNAANSFCCSHCCDQDEHSLCGPAP-YMLVDQNNRGRLEAFECGRHELNEQLRRSTSADCPREGIFELLSELRDAAVPSTLPSELRARGVGGAYG---QGXXXXXXXXXXXXXXXXXXXXXXXXXAGPSVSGQRMEVLYAHNAAGQEIVVEIEE 277
            +  + RAFY D  ++VVD LIREKY+KDK+E+LG+R+NL+ KQVR+ LA L  EG   +E +SD I   R SNYWYID R AV+ I LR++ M++ L    E+KA      TY CP+C   ++++ + +L N   SFCCSHCC  D+HS C     Y L D N++  L++      +LNEQL  ST    PRE IFEL+  LRD  VPS LPS+LR RG+GG                                 AG   S + ++VLY  N  G+E+VVEIE+
Sbjct:   17 VATIARAFYTDITVLVVDTLIREKYIKDKDEDLGSRLNLQPKQVRSALAELLAEGFAAKEMMSDEIYSGRSSNYWYIDLRHAVNVILLRVFQMKEILSQRQEAKAAHQALPTYVCPRCHEKFEVMDIYKLSNGDRSFCCSHCCPNDDHSGCKKGSGYTLEDFNDKKGLDSVTALIGQLNEQLGESTDPAVPRESIFELVHSLRDTVVPSNLPSQLRQRGMGGQQRGDVSSAHARFQDDFHHRGRAADKAAAERGAAGGRASSRPVQVLYTKNWRGEEVVVEIEQ 300          
BLAST of mRNA_P-wetherbeei_contig7163.5.1 vs. uniprot
Match: A0A4D9CU86_9STRA (HTH TFE/IIEalpha-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CU86_9STRA)

HSP 1 Score: 137 bits (345), Expect = 1.870e-33
Identity = 82/218 (37.61%), Postives = 123/218 (56.42%), Query Frame = 0
Query:    3 AVVRAFYEDPYIVVVDALIREKYLKDKEEELGARVNLRHKQVRAVLAALEREGLVQQESISDVIGGTRMSNYWYIDYRRAVDSIRLRIYLMQKRLKDMESKALLDTTYECPQCQATYDLLAVQQLRNAANSFCCSHCCDQDEHSLCGPAPYMLVDQNNRGRLEAFECGRHELNEQL--RRSTSADCPREGIFELLSELRDAAVPSTLPSELRARGVGG 218
            AV RAFY D  +VV+DAL+R +++KD   ++  R+ +  KQ R +L  L  E L++ E + D + G R   ++YID+    + +R RI+LM + L+ ME +A  + TYECP C     LL VQ LRN    FCC  CC  + H+ C  + + L  ++     E  +  + ++  Q+    S ++  P +GI+ LLS L    +PS LPSEL A GVGG
Sbjct:   42 AVARAFYADDTVVVLDALVRGRHVKDT--DIDTRLGVGAKQARRLLTELLEERLIKTEDVVDELTGKR-ELFYYIDFSHFTNVVRYRIHLMHRELERMEREANDNQTYECPVCGRALPLLEVQPLRNKRYGFCCPTCCLSELHATCEGSQWQLRPKSGVTGFEEVQALKEKMRAQMYGAASETSAAPHDGIYNLLSALEHKPLPSNLPSELIAVGVGG 256          
BLAST of mRNA_P-wetherbeei_contig7163.5.1 vs. uniprot
Match: A0A482S8Q7_9ARCH (HTH TFE/IIEalpha-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S8Q7_9ARCH)

HSP 1 Score: 136 bits (343), Expect = 2.450e-33
Identity = 76/211 (36.02%), Postives = 123/211 (58.29%), Query Frame = 0
Query:    1 MTAVVRAFYEDPYIVVVDALIREKYLKDKEEELGARVNLRHKQVRAVLAALEREGLVQQESISDVIGGTRMSNYWYIDYRRAVDSIRLRIYLMQKRLKDMESKALLDTTYECPQCQATYDLLAVQQLRNAANSFCCSHCCDQDEHSLCGPAPYM-LVDQNNRGRLEAFECGRHELNEQLRRSTSADCPREGIFELLSELRDAAVPSTLPSE 210
            +  + RAFY D  +VV+DAL+REKYL D+  E+G R+ +  K VR V+  LE E L++ E +  +  G    + +Y+DY+  V+ +R R++LMQ+RL   ES  L +  Y+CP C+  +  L   +L ++ + F CSHCC  +        PY  L++ +NR ++ + +  + +++EQ  +         GIFELLS+L+D  +P  LPSE
Sbjct:   17 IATIARAFYPDDVVVVLDALVREKYLIDR--EIGPRLKMSEKDVRKVINQLETEMLIKAEDVP-LGDGASFWHCYYVDYQVFVNIVRYRVFLMQQRLNKQESSELSEVQYKCPTCKNVFSSLDALKLLSSDHKFICSHCCPHENCRTLPAEPYFTLIEIDNRRKISSLQTQQKKMSEQFCKDKDLHL---GIFELLSKLKDVQLPHNLPSE 221          
BLAST of mRNA_P-wetherbeei_contig7163.5.1 vs. uniprot
Match: A0A3M6V7C5_9STRA (HTH TFE/IIEalpha-type domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V7C5_9STRA)

HSP 1 Score: 134 bits (337), Expect = 5.080e-32
Identity = 124/340 (36.47%), Postives = 182/340 (53.53%), Query Frame = 0
Query:    6 RAFYEDPYIVVVDALIREKYLKDKEEELGARVNLRHKQVRAVLAALEREGLVQQESISDV-IGGTRMSNYWYIDYRRAVDSIRLRIYLMQKRLKDMESKALLDTTYEC--PQCQATYDLLAVQQLRNAAN-SFCCSHCCDQDEHSLCGPAPYMLVDQNNRGRLEAFECGRHELNEQLRRSTSADCPREGIFELLSEL-----RDAAVPSTLPSELRARGVGGAYGQGXXXXXXXXXXXXXXXXXXXXXXXXXAGPSVSGQRMEVLYAHNAAGQEIVVEIEEDSDAEEERDEALVGVLPNNALRKRKAELAKAEQAAAAVKKIKVAPQFLLGSRIAGGAAA 336
            RAFY D ++VV+ ALIREK++KD  +E+G  VNL+ +QVR ++  L ++ LV +E ++D   GG+  ++YWYIDY+  VD ++ R+Y+M + LKD E   +   T++C  P+C   Y  L  Q L       F C HC +            +L++ +N  RLE  +  +H+  +Q+ +    D   EGI+E+L  +        A+P+ LPS+ RA G+GG   +     XXXXXXXXXXXXXX       +           LY + A  QEI+V+I  +  AE   DE L         R RK +   A Q  AA + +   P+FLLGS I+G  AA
Sbjct:   14 RAFYSDEHVVVLGALIREKFMKD--DEMGNAVNLQTRQVRKIMNELHQDNLVCEEVLNDKRSGGSSSTSYWYIDYKYFVDVVQYRLYMMHEHLKDSEQLEIERQTFQCSDPECGREYTALEAQLLLMPGQFQFRCGHCNE------------LLLECDNNDRLERIQNLQHKFKDQMNKQ---DGMHEGIYEVLRRIGGFVKEGHALPTNLPSDNRAAGIGGNSARAANAAXXXXXXXXXXXXXXNRADEENS--------QSYLYPYGAQDQEIIVDIAGNDQAE---DEYLTS-------RDRKEDKEAANQKIAAPRAL---PEFLLGSSISGHMAA 315          
BLAST of mRNA_P-wetherbeei_contig7163.5.1 vs. uniprot
Match: A0A8K1C2Y0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2Y0_PYTOL)

HSP 1 Score: 132 bits (333), Expect = 2.010e-31
Identity = 84/222 (37.84%), Postives = 128/222 (57.66%), Query Frame = 0
Query:    6 RAFYEDPYIVVVDALIREKYLKDKEEELGARVNLRHKQVRAVLAALEREGLVQQESISDV-IGGTRMSNYWYIDYRRAVDSIRLRIYLMQKRLKDMESKALLDTTYECPQ--CQATYDLLAVQQLRNAAN-SFCCSHCCDQDEHSLCGPAPYMLVDQNNRGRLEAFECGRHELNEQLRRSTSADCPREGIFELLSELRDAA-----VPSTLPSELRARGVGG 218
            RAFY D ++VV+ ALIREK+LKD  +E+G  VNL+ +QVR ++  L ++ LV +E ++D  +GG+  ++YWYIDY+  V+ ++ R+Y+MQ+ LK+ E   +   TY+C    C   Y  L VQ+L       F C HC +            +L++ +N  RLE  +    +L +Q+ R       REGIFE+L  + D       +P+ LPSE RA G+GG
Sbjct:   26 RAFYADEHVVVLQALIREKFLKD--DEMGNAVNLQTRQVRKIMNELHQDMLVCEEVLNDKRLGGSSSTSYWYIDYKYFVEVVQYRLYVMQEHLKENEKLEIERQTYQCKNSDCGREYTALEVQRLLMPGQFQFRCGHCNE------------VLLECDNNDRLEKIQALDRKLKDQMNRQAGM---REGIFEVLKRINDYVKEGNVLPTNLPSENRAAGIGG 230          
BLAST of mRNA_P-wetherbeei_contig7163.5.1 vs. uniprot
Match: K3WPK9_GLOUD (HTH TFE/IIEalpha-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPK9_GLOUD)

HSP 1 Score: 130 bits (326), Expect = 1.510e-30
Identity = 125/340 (36.76%), Postives = 183/340 (53.82%), Query Frame = 0
Query:    6 RAFYEDPYIVVVDALIREKYLKDKEEELGARVNLRHKQVRAVLAALEREGLVQQESISDV-IGGTRMSNYWYIDYRRAVDSIRLRIYLMQKRLKDMESKALLDTTYEC--PQCQATYDLLAVQQLRNAAN-SFCCSHCCDQDEHSLCGPAPYMLVDQNNRGRLEAFECGRHELNEQLRRSTSADCPREGIFELLSELRDAA-----VPSTLPSELRARGVGGAYGQGXXXXXXXXXXXXXXXXXXXXXXXXXAGPSVSGQRMEVLYAHNAAGQEIVVEIEEDSDAEEERDEALVGVLPNNALRKRKAELAKAEQAAAAVKKIKVAPQFLLGSRIAGGAAA 336
            +AFY D ++VV+ ALIREK+LKD  +E+G+ VNL+ +QVR ++  L ++ LV +E ++D  +GG+  ++YWYIDY+  VD ++ R+Y+M + LKD E   +   T++C  P C   Y  L  Q L       F C HC +             L++ +N  RLE  +  + +  +Q+ +        EGI+E+L  + D       +P+ LPSE RA G+GG   +          XXXXX XXXXXXXXX A    S      LY + A  QEI+V+I  +  AE   DE L+        RKRKAE    ++ A   K  +  P+FL+GS I+G  AA
Sbjct:   14 QAFYSDEHVVVLRALIREKFLKD--DEMGSAVNLQTRQVRKIMNELHQDHLVCEEVLNDKRLGGSSSTSYWYIDYKYFVDVVQYRLYVMHEHLKDSEQLEIERQTFQCKDPDCGREYTALEAQLLLMPGQFQFRCGHCNEP------------LLECDNNDRLEKIQSLQRKFKDQMNKQAGM---HEGIYEVLRRIGDFVKEGHILPTNLPSENRAAGLGGNSVRAGAAGGGRAGXXXXXNXXXXXXXXXGADGKNS---QSYLYPYGAQDQEIIVDIAGNDHAE---DEYLMD-------RKRKAEDDVTDRPA---KGPRALPEFLMGSSISGHMAA 320          
BLAST of mRNA_P-wetherbeei_contig7163.5.1 vs. uniprot
Match: D0NAI4_PHYIT (HTH TFE/IIEalpha-type domain-containing protein n=27 Tax=Phytophthora TaxID=4783 RepID=D0NAI4_PHYIT)

HSP 1 Score: 129 bits (323), Expect = 4.250e-30
Identity = 130/340 (38.24%), Postives = 188/340 (55.29%), Query Frame = 0
Query:    6 RAFYEDPYIVVVDALIREKYLKDKEEELGARVNLRHKQVRAVLAALEREGLVQQESISDV-IGGTRMSNYWYIDYRRAVDSIRLRIYLMQKRLKDMESKALLDTTYEC--PQCQATYDLLAVQQLRNAAN-SFCCSHCCDQDEHSLCGPAPYMLVDQNNRGRLEAFECGRHELNEQLRRSTSADCPREGIFELLSELRDAA-----VPSTLPSELRARGVGGAYGQGXXXXXXXXXXXXXXXXXXXXXXXXXAGPSVSGQRMEVLYAHNAAGQEIVVEIEEDSDAEEERDEALVGVLPNNALRKRKAELAKAEQAAAAVKKIKVAPQFLLGSRIAGGAAA 336
            RAFY D ++VV+ ALIREK++KD  +E+G  VNL+ +QVR ++  L ++ LV +E ++D  +GG+  ++YWYIDY+  VD ++ R+YLM + LKD E   +   T++C  P+C   Y  L  Q L       F C HC +            +L++ +N  RL   +  + +  +Q+ +        EGI+E+L  + D       +P+ LPS+ RA G+GG   + XXXXXXXXXXXXXXXXXXXXXX      S        LY + A  QEI+V+I  +  AE   DE L         R+RK +   A Q  AA + +   P+FL GS I+G  AA
Sbjct:   14 RAFYSDEHVVVLSALIREKFMKD--DEMGNAVNLQTRQVRKIMNELHQDNLVCEEVLNDKRLGGSSSTSYWYIDYKYFVDVVQYRLYLMHEHLKDSEQLEIERQTFQCSDPECGREYTALEAQLLLMPGQYQFRCGHCNE------------LLLECDNNDRLLRVQSLQRKFKDQMNKQNGL---HEGIYEVLRRIGDFVKEGHVLPNNLPSDNRAAGLGGNSARAXXXXXXXXXXXXXXXXXXXXXXDDQNSQSY-------LYPYGAQDQEIIVDIAGNDQAE---DEYLTS-------RERKEDKEAASQQVAAPRAL---PEFLQGSSISGHMAA 316          
BLAST of mRNA_P-wetherbeei_contig7163.5.1 vs. uniprot
Match: A0A7S3Y5E8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5E8_HETAK)

HSP 1 Score: 123 bits (309), Expect = 1.830e-29
Identity = 84/225 (37.33%), Postives = 113/225 (50.22%), Query Frame = 0
Query:    4 VVRAFYEDPYIVVVDALIREKYLKDKEEELGARVNLRHKQVRAVLAALEREGLVQQESISDVIGGTRMSNYWYIDYRRAVDSIRLRIYLMQKRLKDMESKALLDTTYECPQCQATYDLLAVQQLRNAANSFCCSHCCDQDEHSLCG----PAPYMLVDQNNRGRLEAFECGRHELNEQLRRSTSADCPR-EGIFELLSELRDA------AVPSTLPSELRARGVG 217
            VVRAFY+D  ++V+D LIR + ++D   +LG    L  KQVR  +  L+ E L   E  SD   G R S YW+++YRR V ++  R +  Q+ L+  E K     TY C  C   + LL VQ+L N    FCCSHCC  D H+ CG    P  + L +       E        L  QL  +      R +G+ +LL  LRD       A+P+ LPSE   RGVG
Sbjct:   16 VVRAFYDDELVMVMDMLIRHRQIRDA--DLGVVTGLAPKQVRKAVQRLQAEKLCDFEKASDDAQG-RASVYWFVNYRRLVLAVTWRCHRAQQVLEARERKEQERQTYVCEACALQFTLLEVQRLANGGRGFCCSHCCPYDTHAGCGRDGRPTSFPLKEVAAGDGAERARRALRRLRRQLSAAPGGGAWRPDGVLDLLKALRDLQARERLALPTNLPSENFRRGVG 237          
BLAST of mRNA_P-wetherbeei_contig7163.5.1 vs. uniprot
Match: A0A7S0CBM9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CBM9_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.830e-28
Identity = 97/291 (33.33%), Postives = 146/291 (50.17%), Query Frame = 0
Query:    1 MTAVVRAFYEDPYIVVVDALIREKYLKDKEEELGARVNLRHKQVRAVLAALEREGLVQQESISDV-IGGTRMSNYWYIDYRRAVDSIRLRIYLMQKRLKDMESKALLDTTYECP-----QCQATYDLLAVQQLRNAANS-FCCSHC----CDQDEHSLCGPAPYMLVDQNNRGRLEAFECGRHELNEQLRRST-SADCPREGIFELLSELRDAA---VPSTLPSELRARGVGGAYGQGXXXXXXXXXXXXXXXXXXXXXXXXXAGPSVSGQRMEVLYAHNAAGQEIVVEIE 276
            + AVVRAFYED  + ++D L+R+KYL+D  +++G R++L  K+VRA L  LE E LV+ E + D+  GG++ + YWYID+  AV+ IRLRIYL++K+ K+ E +AL  + Y CP      C   Y     QQL +     F C  C    C+  E          L+D  N+  L A +     +  QL   T  A   R GI++LL ++R  +   + S LPSE  + G+G    +G                          G S S +  ++ +  NA G+E+  E+E
Sbjct:   12 IAAVVRAFYEDDAVSLIDVLLRDKYLRD--DDMGPRLSLPVKKVRATLQHLELEHLVKFELVDDLSTGGSQATKYWYIDFNHAVNVIRLRIYLLEKKQKEAEIRALSSSMYLCPGYKTKACNGRYTETEAQQLVHPETGLFLCQECLQTHCNNPEPPPMSTYTLELID--NKKDLTAAQNNMRRVRVQLGSKTVGAQQLRVGIYDLLQKVRQGSKGPLSSNLPSENISFGIGSTRLEGTGRTAGLKAKKLKEQGGFNKLE----GASRSEEGSDLNFLKNARGEEVAFEVE 294          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7163.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CC40_9STRA8.340e-6940.52TFIIE alpha subunit-domain-containing protein n=1 ... [more]
A0A6H5LCE2_9PHAE8.090e-5842.96HTH TFE/IIEalpha-type domain-containing protein n=... [more]
A0A4D9CU86_9STRA1.870e-3337.61HTH TFE/IIEalpha-type domain-containing protein n=... [more]
A0A482S8Q7_9ARCH2.450e-3336.02HTH TFE/IIEalpha-type domain-containing protein n=... [more]
A0A3M6V7C5_9STRA5.080e-3236.47HTH TFE/IIEalpha-type domain-containing protein n=... [more]
A0A8K1C2Y0_PYTOL2.010e-3137.84Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WPK9_GLOUD1.510e-3036.76HTH TFE/IIEalpha-type domain-containing protein n=... [more]
D0NAI4_PHYIT4.250e-3038.24HTH TFE/IIEalpha-type domain-containing protein n=... [more]
A0A7S3Y5E8_HETAK1.830e-2937.33Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S0CBM9_9STRA1.830e-2833.33Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002853Transcription initiation factor IIE subunit alpha, N-terminalSMARTSM00531tfiie3coord: 11..157
e-value: 2.8E-11
score: 53.5
IPR024550TFIIEalpha/SarR/Rpc3 HTH domainPFAMPF02002TFIIE_alphacoord: 3..102
e-value: 6.2E-12
score: 45.3
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..82
e-value: 2.2E-6
score: 29.3
IPR039997Transcription factor EPANTHERPTHR13097TRANSCRIPTION INITIATION FACTOR IIE, ALPHA SUBUNITcoord: 3..295
IPR017919Transcription factor TFE/TFIIEalpha HTH domainPROSITEPS51344HTH_TFE_IIEcoord: 1..87
score: 17.29402
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 3..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7163contigP-wetherbeei_contig7163:2063..3124 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7163.5.1mRNA_P-wetherbeei_contig7163.5.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7163 2054..3124 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7163.5.1 ID=prot_P-wetherbeei_contig7163.5.1|Name=mRNA_P-wetherbeei_contig7163.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=336bp
MTAVVRAFYEDPYIVVVDALIREKYLKDKEEELGARVNLRHKQVRAVLAA
LEREGLVQQESISDVIGGTRMSNYWYIDYRRAVDSIRLRIYLMQKRLKDM
ESKALLDTTYECPQCQATYDLLAVQQLRNAANSFCCSHCCDQDEHSLCGP
APYMLVDQNNRGRLEAFECGRHELNEQLRRSTSADCPREGIFELLSELRD
AAVPSTLPSELRARGVGGAYGQGGGAAGGGGGGGGGAAAGGNGGRGGGAG
PSVSGQRMEVLYAHNAAGQEIVVEIEEDSDAEEERDEALVGVLPNNALRK
RKAELAKAEQAAAAVKKIKVAPQFLLGSRIAGGAAA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002853TFIIE_asu
IPR024550TFIIEa/SarR/Rpc3_HTH_dom
IPR036388WH-like_DNA-bd_sf
IPR039997TFE
IPR017919TFIIE/TFIIEa_HTH
IPR036390WH_DNA-bd_sf