mRNA_P-wetherbeei_contig7163.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7163.5.1 vs. uniprot
Match: A0A836CC40_9STRA (TFIIE alpha subunit-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC40_9STRA) HSP 1 Score: 239 bits (610), Expect = 2.230e-70 Identity = 143/351 (40.74%), Postives = 182/351 (51.85%), Query Frame = 1
Query: 1 ERLMTAVVRAFYEDPYIVVVDALIREKYLKDKEEELGARVNLRHKQVRAVLAALEREGLVQQESISDVIGGTRMSNYWYIDYRRAVDSIRLRIYLMQKRLKDMESKALLDTTYECPQCQATYDLLAVQQLRNAANSFCCSHCCDQDEHSLCGPAPYMLVDQNNRGRLEAFECGRHELNEQLRRSTSADCPREGIFELLS----------------------------------------------------------------ELRDAAVPSTLPSELRARGVGGAY--GQGXXXXXXXXXXXXXXXXXXXXXXXXXAGPSVSGQRMEVLYAHNAAGQEIVVEIEEDSDAE 855
E+L++ VVRAF++D ++V+D LIREKYLKDK+++LGAR+ L+ KQVRAVLA LEREGL +QE + D G R +NYWY+DYR AV+ IRLR YLMQ+RLK+ E L TY CPQC AT+ +L +Q+L N A FCCSHCC+ D H C P+ L D +NR RL EL EQL S + C R G+++L+ +L D VPS LPSELRARGVGG G G S + +++LYA NAAG E+VVEIE DSDA+
Sbjct: 17 EKLVSTVVRAFFDDDAVLVIDTLIREKYLKDKDDDLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGGRKANYWYVDYRHAVNVIRLRTYLMQRRLKEAERAELARQTYACPQCGATFGVLEIQKLVNGARGFCCSHCCEMDTHETCARGPHSLRDFDNRERLATVTRALRELKEQLSASAAPGCARAGVYDLVXXXXXXXXXXXXXXXXXXXXXXXXXESRGXXXXXXXXXXXXXXXXVYDLVKEAVRAXXXXXXXXXQLHDKPVPSNLPSELRARGVGGGARGSHGASKLARFRDDRFSLHAGYAAGTKGGDGAHGSNRAVDLLYARNAAGYEVVVEIESDSDAD 367
BLAST of mRNA_P-wetherbeei_contig7163.5.1 vs. uniprot
Match: A0A6H5LCE2_9PHAE (HTH TFE/IIEalpha-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCE2_9PHAE) HSP 1 Score: 210 bits (534), Expect = 7.930e-60 Identity = 125/287 (43.55%), Postives = 166/287 (57.84%), Query Frame = 1
Query: 1 ERLMTAVVRAFYEDPYIVVVDALIREKYLKDKEEELGARVNLRHKQVRAVLAALEREGLVQQESISDVIGGTRMSNYWYIDYRRAVDSIRLRIYLMQKRLKD-MESKALLDT--TYECPQCQATYDLLAVQQLRNAANSFCCSHCCDQDEHSLCGPAP-YMLVDQNNRGRLEAFECGRHELNEQLRRSTSADCPREGIFELLSELRDAAVPSTLPSELRARGVGGAYG---QGXXXXXXXXXXXXXXXXXXXXXXXXXAGPSVSGQRMEVLYAHNAAGQEIVVEIEE 840
ERL+ + RAFY D ++VVD LIREKY+KDK+E+LG+R+NL+ KQVR+ LA L EG +E +SD I R SNYWYID R AV+ I LR++ M++ L E+KA TY CP+C ++++ + +L N SFCCSHCC D+HS C Y L D N++ L++ +LNEQL ST PRE IFEL+ LRD VPS LPS+LR RG+GG AG S + ++VLY N G+E+VVEIE+
Sbjct: 14 ERLVATIARAFYTDITVLVVDTLIREKYIKDKDEDLGSRLNLQPKQVRSALAELLAEGFAAKEMMSDEIYSGRSSNYWYIDLRHAVNVILLRVFQMKEILSQRQEAKAAHQALPTYVCPRCHEKFEVMDIYKLSNGDRSFCCSHCCPNDDHSGCKKGSGYTLEDFNDKKGLDSVTALIGQLNEQLGESTDPAVPRESIFELVHSLRDTVVPSNLPSQLRQRGMGGQQRGDVSSAHARFQDDFHHRGRAADKAAAERGAAGGRASSRPVQVLYTKNWRGEEVVVEIEQ 300
BLAST of mRNA_P-wetherbeei_contig7163.5.1 vs. uniprot
Match: A0A4D9CU86_9STRA (HTH TFE/IIEalpha-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CU86_9STRA) HSP 1 Score: 141 bits (355), Expect = 7.490e-35 Identity = 84/223 (37.67%), Postives = 127/223 (56.95%), Query Frame = 1
Query: 1 ERLMTAVVRAFYEDPYIVVVDALIREKYLKDKEEELGARVNLRHKQVRAVLAALEREGLVQQESISDVIGGTRMSNYWYIDYRRAVDSIRLRIYLMQKRLKDMESKALLDTTYECPQCQATYDLLAVQQLRNAANSFCCSHCCDQDEHSLCGPAPYMLVDQNNRGRLEAFECGRHELNEQL--RRSTSADCPREGIFELLSELRDAAVPSTLPSELRARGVGG 663
+RL+ AV RAFY D +VV+DAL+R +++KD ++ R+ + KQ R +L L E L++ E + D + G R ++YID+ + +R RI+LM + L+ ME +A + TYECP C LL VQ LRN FCC CC + H+ C + + L ++ E + + ++ Q+ S ++ P +GI+ LLS L +PS LPSEL A GVGG
Sbjct: 37 KRLVRAVARAFYADDTVVVLDALVRGRHVKDT--DIDTRLGVGAKQARRLLTELLEERLIKTEDVVDELTGKR-ELFYYIDFSHFTNVVRYRIHLMHRELERMEREANDNQTYECPVCGRALPLLEVQPLRNKRYGFCCPTCCLSELHATCEGSQWQLRPKSGVTGFEEVQALKEKMRAQMYGAASETSAAPHDGIYNLLSALEHKPLPSNLPSELIAVGVGG 256
BLAST of mRNA_P-wetherbeei_contig7163.5.1 vs. uniprot
Match: A0A482S8Q7_9ARCH (HTH TFE/IIEalpha-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S8Q7_9ARCH) HSP 1 Score: 140 bits (353), Expect = 9.660e-35 Identity = 78/214 (36.45%), Postives = 126/214 (58.88%), Query Frame = 1
Query: 1 ERLMTAVVRAFYEDPYIVVVDALIREKYLKDKEEELGARVNLRHKQVRAVLAALEREGLVQQESISDVIGGTRMSNYWYIDYRRAVDSIRLRIYLMQKRLKDMESKALLDTTYECPQCQATYDLLAVQQLRNAANSFCCSHCCDQDEHSLCGPAPYM-LVDQNNRGRLEAFECGRHELNEQLRRSTSADCPREGIFELLSELRDAAVPSTLPSE 639
E+L+ + RAFY D +VV+DAL+REKYL D+ E+G R+ + K VR V+ LE E L++ E + + G + +Y+DY+ V+ +R R++LMQ+RL ES L + Y+CP C+ + L +L ++ + F CSHCC + PY L++ +NR ++ + + + +++EQ + GIFELLS+L+D +P LPSE
Sbjct: 14 EQLIATIARAFYPDDVVVVLDALVREKYLIDR--EIGPRLKMSEKDVRKVINQLETEMLIKAEDVP-LGDGASFWHCYYVDYQVFVNIVRYRVFLMQQRLNKQESSELSEVQYKCPTCKNVFSSLDALKLLSSDHKFICSHCCPHENCRTLPAEPYFTLIEIDNRRKISSLQTQQKKMSEQFCKDKDLHL---GIFELLSKLKDVQLPHNLPSE 221
BLAST of mRNA_P-wetherbeei_contig7163.5.1 vs. uniprot
Match: A0A3M6V7C5_9STRA (HTH TFE/IIEalpha-type domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V7C5_9STRA) HSP 1 Score: 137 bits (346), Expect = 2.930e-33 Identity = 127/348 (36.49%), Postives = 187/348 (53.74%), Query Frame = 1
Query: 1 ERLMTAVVRAFYEDPYIVVVDALIREKYLKDKEEELGARVNLRHKQVRAVLAALEREGLVQQESISDV-IGGTRMSNYWYIDYRRAVDSIRLRIYLMQKRLKDMESKALLDTTYEC--PQCQATYDLLAVQQLRNAAN-SFCCSHCCDQDEHSLCGPAPYMLVDQNNRGRLEAFECGRHELNEQLRRSTSADCPREGIFELLSEL-----RDAAVPSTLPSELRARGVGGAYGQGXXXXXXXXXXXXXXXXXXXXXXXXXAGPSVSGQRMEVLYAHNAAGQEIVVEIEEDSDAEEERDEALVGVLPNNALRKRKAELAKAEQAAAAVKKIKVAPQFLLGSRIAGGAAA 1017
E+L+ V RAFY D ++VV+ ALIREK++KD +E+G VNL+ +QVR ++ L ++ LV +E ++D GG+ ++YWYIDY+ VD ++ R+Y+M + LKD E + T++C P+C Y L Q L F C HC + +L++ +N RLE + +H+ +Q+ + D EGI+E+L + A+P+ LPS+ RA G+GG + XXXXXXXXXXXXXX + LY + A QEI+V+I + AE DE L R RK + A Q AA + + P+FLLGS I+G AA
Sbjct: 6 EKLVKLVGRAFYSDEHVVVLGALIREKFMKD--DEMGNAVNLQTRQVRKIMNELHQDNLVCEEVLNDKRSGGSSSTSYWYIDYKYFVDVVQYRLYMMHEHLKDSEQLEIERQTFQCSDPECGREYTALEAQLLLMPGQFQFRCGHCNE------------LLLECDNNDRLERIQNLQHKFKDQMNKQ---DGMHEGIYEVLRRIGGFVKEGHALPTNLPSDNRAAGIGGNSARAANAAXXXXXXXXXXXXXXNRADEENS--------QSYLYPYGAQDQEIIVDIAGNDQAE---DEYLTS-------RDRKEDKEAANQKIAAPRAL---PEFLLGSSISGHMAA 315
BLAST of mRNA_P-wetherbeei_contig7163.5.1 vs. uniprot
Match: A0A8K1C2Y0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2Y0_PYTOL) HSP 1 Score: 136 bits (342), Expect = 1.170e-32 Identity = 86/230 (37.39%), Postives = 133/230 (57.83%), Query Frame = 1
Query: 1 ERLMTAVVRAFYEDPYIVVVDALIREKYLKDKEEELGARVNLRHKQVRAVLAALEREGLVQQESISDV-IGGTRMSNYWYIDYRRAVDSIRLRIYLMQKRLKDMESKALLDTTYECPQ--CQATYDLLAVQQLRNAAN-SFCCSHCCDQDEHSLCGPAPYMLVDQNNRGRLEAFECGRHELNEQLRRSTSADCPREGIFELLSELRDAA-----VPSTLPSELRARGVGG 663
E+L+ + RAFY D ++VV+ ALIREK+LKD +E+G VNL+ +QVR ++ L ++ LV +E ++D +GG+ ++YWYIDY+ V+ ++ R+Y+MQ+ LK+ E + TY+C C Y L VQ+L F C HC + +L++ +N RLE + +L +Q+ R REGIFE+L + D +P+ LPSE RA G+GG
Sbjct: 18 EKLVNLIGRAFYADEHVVVLQALIREKFLKD--DEMGNAVNLQTRQVRKIMNELHQDMLVCEEVLNDKRLGGSSSTSYWYIDYKYFVEVVQYRLYVMQEHLKENEKLEIERQTYQCKNSDCGREYTALEVQRLLMPGQFQFRCGHCNE------------VLLECDNNDRLEKIQALDRKLKDQMNRQAGM---REGIFEVLKRINDYVKEGNVLPTNLPSENRAAGIGG 230
BLAST of mRNA_P-wetherbeei_contig7163.5.1 vs. uniprot
Match: K3WPK9_GLOUD (HTH TFE/IIEalpha-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPK9_GLOUD) HSP 1 Score: 133 bits (334), Expect = 1.210e-31 Identity = 128/348 (36.78%), Postives = 188/348 (54.02%), Query Frame = 1
Query: 1 ERLMTAVVRAFYEDPYIVVVDALIREKYLKDKEEELGARVNLRHKQVRAVLAALEREGLVQQESISDV-IGGTRMSNYWYIDYRRAVDSIRLRIYLMQKRLKDMESKALLDTTYEC--PQCQATYDLLAVQQLRNAAN-SFCCSHCCDQDEHSLCGPAPYMLVDQNNRGRLEAFECGRHELNEQLRRSTSADCPREGIFELLSELRDAA-----VPSTLPSELRARGVGGAYGQGXXXXXXXXXXXXXXXXXXXXXXXXXAGPSVSGQRMEVLYAHNAAGQEIVVEIEEDSDAEEERDEALVGVLPNNALRKRKAELAKAEQAAAAVKKIKVAPQFLLGSRIAGGAAA 1017
E+L+ V +AFY D ++VV+ ALIREK+LKD +E+G+ VNL+ +QVR ++ L ++ LV +E ++D +GG+ ++YWYIDY+ VD ++ R+Y+M + LKD E + T++C P C Y L Q L F C HC + L++ +N RLE + + + +Q+ + EGI+E+L + D +P+ LPSE RA G+GG + XXXXX XXXXXXXXX A S LY + A QEI+V+I + AE DE L+ RKRKAE ++ A K + P+FL+GS I+G AA
Sbjct: 6 EKLVHLVGQAFYSDEHVVVLRALIREKFLKD--DEMGSAVNLQTRQVRKIMNELHQDHLVCEEVLNDKRLGGSSSTSYWYIDYKYFVDVVQYRLYVMHEHLKDSEQLEIERQTFQCKDPDCGREYTALEAQLLLMPGQFQFRCGHCNEP------------LLECDNNDRLEKIQSLQRKFKDQMNKQAGM---HEGIYEVLRRIGDFVKEGHILPTNLPSENRAAGLGGNSVRAGAAGGGRAGXXXXXNXXXXXXXXXGADGKNS---QSYLYPYGAQDQEIIVDIAGNDHAE---DEYLMD-------RKRKAEDDVTDRPA---KGPRALPEFLMGSSISGHMAA 320
BLAST of mRNA_P-wetherbeei_contig7163.5.1 vs. uniprot
Match: D0NAI4_PHYIT (HTH TFE/IIEalpha-type domain-containing protein n=27 Tax=Phytophthora TaxID=4783 RepID=D0NAI4_PHYIT) HSP 1 Score: 132 bits (333), Expect = 1.790e-31 Identity = 133/348 (38.22%), Postives = 193/348 (55.46%), Query Frame = 1
Query: 1 ERLMTAVVRAFYEDPYIVVVDALIREKYLKDKEEELGARVNLRHKQVRAVLAALEREGLVQQESISDV-IGGTRMSNYWYIDYRRAVDSIRLRIYLMQKRLKDMESKALLDTTYEC--PQCQATYDLLAVQQLRNAAN-SFCCSHCCDQDEHSLCGPAPYMLVDQNNRGRLEAFECGRHELNEQLRRSTSADCPREGIFELLSELRDAA-----VPSTLPSELRARGVGGAYGQGXXXXXXXXXXXXXXXXXXXXXXXXXAGPSVSGQRMEVLYAHNAAGQEIVVEIEEDSDAEEERDEALVGVLPNNALRKRKAELAKAEQAAAAVKKIKVAPQFLLGSRIAGGAAA 1017
E+L+ V RAFY D ++VV+ ALIREK++KD +E+G VNL+ +QVR ++ L ++ LV +E ++D +GG+ ++YWYIDY+ VD ++ R+YLM + LKD E + T++C P+C Y L Q L F C HC + +L++ +N RL + + + +Q+ + EGI+E+L + D +P+ LPS+ RA G+GG + XXXXXXXXXXXXXXXXXXXXXX S LY + A QEI+V+I + AE DE L R+RK + A Q AA + + P+FL GS I+G AA
Sbjct: 6 EKLVNIVGRAFYSDEHVVVLSALIREKFMKD--DEMGNAVNLQTRQVRKIMNELHQDNLVCEEVLNDKRLGGSSSTSYWYIDYKYFVDVVQYRLYLMHEHLKDSEQLEIERQTFQCSDPECGREYTALEAQLLLMPGQYQFRCGHCNE------------LLLECDNNDRLLRVQSLQRKFKDQMNKQNGL---HEGIYEVLRRIGDFVKEGHVLPNNLPSDNRAAGLGGNSARAXXXXXXXXXXXXXXXXXXXXXXDDQNSQSY-------LYPYGAQDQEIIVDIAGNDQAE---DEYLTS-------RERKEDKEAASQQVAAPRAL---PEFLQGSSISGHMAA 316
BLAST of mRNA_P-wetherbeei_contig7163.5.1 vs. uniprot
Match: A0A7S3Y5E8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5E8_HETAK) HSP 1 Score: 127 bits (320), Expect = 4.970e-31 Identity = 87/231 (37.66%), Postives = 116/231 (50.22%), Query Frame = 1
Query: 1 ERLMTAVVRAFYEDPYIVVVDALIREKYLKDKEEELGARVNLRHKQVRAVLAALEREGLVQQESISDVIGGTRMSNYWYIDYRRAVDSIRLRIYLMQKRLKDMESKALLDTTYECPQCQATYDLLAVQQLRNAANSFCCSHCCDQDEHSLCG----PAPYMLVDQNNRGRLEAFECGRHELNEQLRRSTSADCPR-EGIFELLSELRDA------AVPSTLPSELRARGVG 660
ERL VVRAFY+D ++V+D LIR + ++D +LG L KQVR + L+ E L E SD G R S YW+++YRR V ++ R + Q+ L+ E K TY C C + LL VQ+L N FCCSHCC D H+ CG P + L + E L QL + R +G+ +LL LRD A+P+ LPSE RGVG
Sbjct: 10 ERLAGTVVRAFYDDELVMVMDMLIRHRQIRDA--DLGVVTGLAPKQVRKAVQRLQAEKLCDFEKASDDAQG-RASVYWFVNYRRLVLAVTWRCHRAQQVLEARERKEQERQTYVCEACALQFTLLEVQRLANGGRGFCCSHCCPYDTHAGCGRDGRPTSFPLKEVAAGDGAERARRALRRLRRQLSAAPGGGAWRPDGVLDLLKALRDLQARERLALPTNLPSENFRRGVG 237
BLAST of mRNA_P-wetherbeei_contig7163.5.1 vs. uniprot
Match: A0A7S0CBM9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CBM9_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.450e-29 Identity = 99/294 (33.67%), Postives = 148/294 (50.34%), Query Frame = 1
Query: 1 ERLMTAVVRAFYEDPYIVVVDALIREKYLKDKEEELGARVNLRHKQVRAVLAALEREGLVQQESISDV-IGGTRMSNYWYIDYRRAVDSIRLRIYLMQKRLKDMESKALLDTTYECP-----QCQATYDLLAVQQLRNAANS-FCCSHC----CDQDEHSLCGPAPYMLVDQNNRGRLEAFECGRHELNEQLRRST-SADCPREGIFELLSELRDAA---VPSTLPSELRARGVGGAYGQGXXXXXXXXXXXXXXXXXXXXXXXXXAGPSVSGQRMEVLYAHNAAGQEIVVEIE 837
E L+ AVVRAFYED + ++D L+R+KYL+D +++G R++L K+VRA L LE E LV+ E + D+ GG++ + YWYID+ AV+ IRLRIYL++K+ K+ E +AL + Y CP C Y QQL + F C C C+ E L+D N+ L A + + QL T A R GI++LL ++R + + S LPSE + G+G +G G S S + ++ + NA G+E+ E+E
Sbjct: 9 EALIAAVVRAFYEDDAVSLIDVLLRDKYLRD--DDMGPRLSLPVKKVRATLQHLELEHLVKFELVDDLSTGGSQATKYWYIDFNHAVNVIRLRIYLLEKKQKEAEIRALSSSMYLCPGYKTKACNGRYTETEAQQLVHPETGLFLCQECLQTHCNNPEPPPMSTYTLELID--NKKDLTAAQNNMRRVRVQLGSKTVGAQQLRVGIYDLLQKVRQGSKGPLSSNLPSENISFGIGSTRLEGTGRTAGLKAKKLKEQGGFNKLE----GASRSEEGSDLNFLKNARGEEVAFEVE 294 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7163.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7163.5.1 >prot_P-wetherbeei_contig7163.5.1 ID=prot_P-wetherbeei_contig7163.5.1|Name=mRNA_P-wetherbeei_contig7163.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=336bp MTAVVRAFYEDPYIVVVDALIREKYLKDKEEELGARVNLRHKQVRAVLAAback to top mRNA from alignment at P-wetherbeei_contig7163:2054..3124+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7163.5.1 ID=mRNA_P-wetherbeei_contig7163.5.1|Name=mRNA_P-wetherbeei_contig7163.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1071bp|location=Sequence derived from alignment at P-wetherbeei_contig7163:2054..3124+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7163:2054..3124+ >mRNA_P-wetherbeei_contig7163.5.1 ID=mRNA_P-wetherbeei_contig7163.5.1|Name=mRNA_P-wetherbeei_contig7163.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1008bp|location=Sequence derived from alignment at P-wetherbeei_contig7163:2054..3124+ (Phaeothamnion wetherbeei SAG_119_79)back to top |