prot_P-wetherbeei_contig692.4.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig692.4.1
Unique Nameprot_P-wetherbeei_contig692.4.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length547
Homology
BLAST of mRNA_P-wetherbeei_contig692.4.1 vs. uniprot
Match: D7G5C3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5C3_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 1.420e-51
Identity = 109/238 (45.80%), Postives = 153/238 (64.29%), Query Frame = 0
Query:    1 MCLFVKEGSKDSVKKMLEATPVEGLSKVITLEKLRTAYKTFAARRELMAQYDLFLCDDRILPMMTKALGKTFLAARKQPVAVRITRKTSLPLAVARARDATFLIPSYGVCWGLKVATIDMPAEHVVDNVVAAVARAADKMIPGGWKNIQGLHLQATGSVALPIYSAVLETIAPEPPSPPG-----AAEEDAAKXXXXXXXXXXXXXXXAKRRIKSPLLKAQLRKL---AHGEKAAAAA 230
            MCL VK+ +K  +K+M E  PVEGL+K+I L+KLRT YK F  RREL++Q+DLFL DDRILPM+TKALGKTFL  +KQPV +++ R+ S    +ARARD+ FL+ S+G CW +K+A   M  + VV+N++  VA   +K IP  WKN++ ++++ + SVALP+YS + +     PP+P       A +E+AA                AK+R   PL++ QL KL   A  EKAA+ A
Sbjct:   72 MCLIVKDNAKVWIKEMAEKEPVEGLTKIIKLDKLRTQYKDFKDRRELLSQFDLFLADDRILPMLTKALGKTFLKVKKQPVPIKLERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMTGVAAVVEK-IPRKWKNVKAINIKCSHSVALPVYSNIGDL----PPAPSAKKATVAGKEEAA---GEGEGKEPNSHSQAKKRKPRPLIRQQLNKLKEEAKAEKAASTA 301          
BLAST of mRNA_P-wetherbeei_contig692.4.1 vs. uniprot
Match: A0A7S2CVK6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CVK6_9STRA)

HSP 1 Score: 162 bits (410), Expect = 1.830e-41
Identity = 85/166 (51.20%), Postives = 116/166 (69.88%), Query Frame = 0
Query:    1 MCLFVKEGSKDSVKKML-EATPVEGLSKVITLEKLRTAYKTFAARRELMAQYDLFLCDDRILPMMTKALGKTFLAARKQPVAVRITRKTSLPLAVARARDATFLIPSYGVCWGLKVATIDMPAEHVVDNVVAAVARAADKMIPGGWKNIQGLHLQATGSVALPIYS 165
            MCLF+K+  K  VK +L E  PVEGL+K+ITL+KLRT+Y  F+ RREL+A YDLFL D+RILPM+ KALGKTF + +KQP+ + +TR  SLP  V RARD+T LI   G C  + V   +M  + +V N+VAA + A +  IP  WKNIQ + ++   S++LPI++
Sbjct:  126 MCLFIKKEDKPLVKSLLMEDNPVEGLAKIITLDKLRTSYARFSQRRELLASYDLFLADERILPMLCKALGKTFFSRKKQPIPLCVTRHESLPHRVRRARDSTSLIIPSGTCVAVIVGNTNMTPKELVANIVAAASSAIEH-IPRKWKNIQAIQVKTADSMSLPIFN 290          
BLAST of mRNA_P-wetherbeei_contig692.4.1 vs. uniprot
Match: A0A7S2SVD8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVD8_9STRA)

HSP 1 Score: 150 bits (378), Expect = 2.040e-37
Identity = 81/166 (48.80%), Postives = 113/166 (68.07%), Query Frame = 0
Query:    1 MCLFVKEGSKDSVKKML-EATPVEGLSKVITLEKLRTAYKTFAARRELMAQYDLFLCDDRILPMMTKALGKTFLAARKQPVAVRITRKTSLPLAVARARDATFLIPSYGVCWGLKVATIDMPAEHVVDNVVAAVARAADKMIPGGWKNIQGLHLQATGSVALPIYS 165
            MCLF+K   K  VK++L E+ PV GL KVITL+KLRT+Y  F  RREL++ YDLFL DDRILPM+ K LGKTF + +KQPV VRI R+ +LP  + RARD+T+L+   G    + +    M  + +V+N++AA   A D  IP  W N+Q +++++  SVALP+ +
Sbjct:   60 MCLFMKTEDKPWVKELLMESKPVPGLKKVITLDKLRTSYARFERRRELISTYDLFLADDRILPMLCKTLGKTFFSRKKQPVPVRI-RRGALPQTIQRARDSTYLVLGGGNNVSVCIGNTSMTRKQLVENLLAATNEAVDH-IPRKWANVQAIYIKSDSSVALPVLN 223          
BLAST of mRNA_P-wetherbeei_contig692.4.1 vs. uniprot
Match: D0N113_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N113_PHYIT)

HSP 1 Score: 144 bits (364), Expect = 5.650e-35
Identity = 78/176 (44.32%), Postives = 110/176 (62.50%), Query Frame = 0
Query:    1 MCLFVKEGSKDSVKKMLEATPVEGLSKVITLEKLRTAYKTFAARRELMAQYDLFLCDDRILPMMTKALGKTFLAARKQPVAVRITRKTSLPLAVARARDATFLIPSYGVCWGLKVATIDMPAEHVVDNVVAAVARAADKMIPGGWKNIQGLHLQATGSVALPIYSAVLETIAPEPP 176
            +CLFVK+  K  +K+ L   PV+GL+KV+T++KLR  +  F  +R L A YD+FL DDR+LP +   LG  F   +KQPV+VR++RK         AR   F + S GVC  +KVA +DM  E +VDNV+ A+   A  ++P GW  +Q + L+   SVALP+Y+A L T+A  PP
Sbjct:   82 ICLFVKDEDKKRIKEALAKDPVQGLTKVLTVKKLRKNFSRFEDKRALAAAYDMFLADDRVLPYLKGPLGNKFFVKKKQPVSVRVSRKDVANSVRLAARRTAFHV-SAGVCCNVKVARLDMTPEQIVDNVMVAMNNCAS-LVPKGWNGVQSISLKLADSVALPVYNA-LATLAKLPP 254          
BLAST of mRNA_P-wetherbeei_contig692.4.1 vs. uniprot
Match: A0A3M6VNB9_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VNB9_9STRA)

HSP 1 Score: 142 bits (358), Expect = 5.820e-35
Identity = 76/176 (43.18%), Postives = 112/176 (63.64%), Query Frame = 0
Query:    1 MCLFVKEGSKDSVKKMLEATPVEGLSKVITLEKLRTAYKTFAARRELMAQYDLFLCDDRILPMMTKALGKTFLAARKQPVAVRITRKTSLPLAVARARDATFLIPSYGVCWGLKVATIDMPAEHVVDNVVAAVARAADKMIPGGWKNIQGLHLQATGSVALPIYSAVLETIAPEPP 176
            +CLFVK+  K  +K+ LE  PV+G++KV+T++KLR  +  F  +R L A YD+FL DDR+LP +   LG TF   +K PVAVR++RK ++  +V  A   T    S GVC  +KVA +DM  E +VDN++ A A +   +IP GW  +Q + ++   S+ALP+Y+A L  +A  PP
Sbjct:   17 ICLFVKDDDKKRIKEALEKDPVQGVTKVMTVKKLRKNFSRFEDKRALAAAYDMFLADDRVLPYLKGPLGTTFFTKKKAPVAVRVSRK-NVATSVRLASRRTAFHVSAGVCNNVKVARLDMTPEQIVDNIMVA-ANSCASLIPKGWNGVQSICIKTNNSIALPVYNA-LAPLAKLPP 189          
BLAST of mRNA_P-wetherbeei_contig692.4.1 vs. uniprot
Match: A0A225WZF5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZF5_9STRA)

HSP 1 Score: 144 bits (362), Expect = 1.380e-34
Identity = 73/176 (41.48%), Postives = 116/176 (65.91%), Query Frame = 0
Query:    1 MCLFVKEGSKDSVKKMLEATPVEGLSKVITLEKLRTAYKTFAARRELMAQYDLFLCDDRILPMMTKALGKTFLAARKQPVAVRITRKTSLPLAVARARDATFLIPSYGVCWGLKVATIDMPAEHVVDNVVAAVARAADKMIPGGWKNIQGLHLQATGSVALPIYSAVLETIAPEPP 176
            +CLFVK+  K  +K++L  +PV+G++KV+T++KLR  +  F  +R L A YD+FL DDR+LP +  ALG  F   +KQP+AVR++RK +       AR   F + S GVC  +KVA +DM  E +V+N++ A+   A  ++P GW  +Q ++++ + SV+LP+Y+A L ++A  PP
Sbjct:   82 ICLFVKDDDKKRIKELLVKSPVQGVTKVMTVKKLRKNFSRFEDKRALAAAYDMFLADDRVLPYLKGALGTKFFIKKKQPIAVRVSRKDAANAVRLAARRTAFHV-SAGVCNNVKVARLDMTPEQIVENIMVAMNNCAS-LVPKGWNGVQSINIKTSDSVSLPVYNA-LASLAKLPP 254          
BLAST of mRNA_P-wetherbeei_contig692.4.1 vs. uniprot
Match: A0A6A4D992_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4D992_9STRA)

HSP 1 Score: 142 bits (359), Expect = 6.110e-34
Identity = 77/176 (43.75%), Postives = 114/176 (64.77%), Query Frame = 0
Query:    1 MCLFVKEGSKDSVKKMLEATPVEGLSKVITLEKLRTAYKTFAARRELMAQYDLFLCDDRILPMMTKALGKTFLAARKQPVAVRITRKTSLPLAVARARDATFLIPSYGVCWGLKVATIDMPAEHVVDNVVAAVARAADKMIPGGWKNIQGLHLQATGSVALPIYSAVLETIAPEPP 176
            +CLFVK+  K  +K+ L   PV G++KV+T++KLR  +  F  +R L A YD+FL DDR+LP +   LG  F A +KQPVAVR++RK S+  ++  A   T    S GVC  +KVA +DM  E +VDN++ A+   A+ ++P GW  +Q + ++ + SVALP+Y+A L T+A  PP
Sbjct:   82 ICLFVKDEDKKRIKEALAKDPVAGITKVMTVKKLRKNFSRFEDKRALAAAYDMFLADDRVLPYLKGHLGTKFFAKKKQPVAVRVSRK-SVAASLRLASRRTAFHVSAGVCNNVKVARLDMTPEQIVDNIMVAMNSCAN-LVPKGWNGVQSIGIKTSDSVALPVYNA-LATLAKLPP 254          
BLAST of mRNA_P-wetherbeei_contig692.4.1 vs. uniprot
Match: F0WX21_9STRA (Uncharacterized protein AlNc14C340G10778 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WX21_9STRA)

HSP 1 Score: 139 bits (351), Expect = 1.010e-33
Identity = 73/164 (44.51%), Postives = 101/164 (61.59%), Query Frame = 0
Query:    1 MCLFVKEGSKDSVKKMLEATPVEGLSKVITLEKLRTAYKTFAARRELMAQYDLFLCDDRILPMMTKALGKTFLAARKQPVAVRITRKTSLPLAVARARDATFLIPSYGVCWGLKVATIDMPAEHVVDNVVAAVARAADKMIPGGWKNIQGLHLQATGSVALPIY 164
            MCL VK+  KD VKK+L+  PVEGL+KV+TL+KLR  +  F  RR L+  YDLFL DDRILP +   +GK F+  +KQPV VRI+R       +      TF+  S G C  +++A + M  + +V+N++  + R A  +I   W  IQ +HL+   SVALPIY
Sbjct:   76 MCLLVKDTDKDRVKKILKEDPVEGLTKVMTLKKLRKNFARFEDRRTLVGAYDLFLADDRILPYLKSPVGKVFIRVKKQPVPVRISR-AKFTQNLRAVEKQTFMFVSCGACMNVRIAHLGMSVDEIVENIMIGMQRCAS-LIGKKWNGIQAIHLKTNESVALPIY 237          
BLAST of mRNA_P-wetherbeei_contig692.4.1 vs. uniprot
Match: A0A024G4U6_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G4U6_9STRA)

HSP 1 Score: 138 bits (348), Expect = 1.850e-33
Identity = 72/164 (43.90%), Postives = 101/164 (61.59%), Query Frame = 0
Query:    1 MCLFVKEGSKDSVKKMLEATPVEGLSKVITLEKLRTAYKTFAARRELMAQYDLFLCDDRILPMMTKALGKTFLAARKQPVAVRITRKTSLPLAVARARDATFLIPSYGVCWGLKVATIDMPAEHVVDNVVAAVARAADKMIPGGWKNIQGLHLQATGSVALPIY 164
            MCL VK+  K+ VKK+L+  PVEGL+KV+TL+KLR  +  F  RR L+  YDLFL DDRILP +   +GK F+  +KQPV VRI+R  +    +      TF+  S G C  +++A   M  + +V+N++  + R A  +I   W  IQ +HL+   SVALPIY
Sbjct:   76 MCLLVKDTDKERVKKILKEDPVEGLTKVMTLKKLRKNFTRFEDRRTLVGAYDLFLADDRILPYLKSPVGKVFIRVKKQPVPVRISR-ANFTQNLRAVEKQTFMFVSCGACMNIRIAHFGMSVDQIVENIMVGMQRCAS-LIGKKWNGIQAIHLKTNESVALPIY 237          
BLAST of mRNA_P-wetherbeei_contig692.4.1 vs. uniprot
Match: G4YF28_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YF28_PHYSP)

HSP 1 Score: 140 bits (353), Expect = 1.880e-33
Identity = 75/176 (42.61%), Postives = 113/176 (64.20%), Query Frame = 0
Query:    1 MCLFVKEGSKDSVKKMLEATPVEGLSKVITLEKLRTAYKTFAARRELMAQYDLFLCDDRILPMMTKALGKTFLAARKQPVAVRITRKTSLPLAVARARDATFLIPSYGVCWGLKVATIDMPAEHVVDNVVAAVARAADKMIPGGWKNIQGLHLQATGSVALPIYSAVLETIAPEPP 176
            +CLFVK+  K  +K+ L   PV G++KV+T++KLR  +  F  +R L A YD+FL DDR+LP +   LG  F   +KQP+AVR++RK SL  ++  A   T    S GVC  +KVA +DM  E +V+N++ A+   A+ ++P GW  +Q + ++ + SVALP+Y+A L T+A  PP
Sbjct:   82 ICLFVKDEDKKRIKEALAKDPVPGVTKVMTVKKLRKNFSRFEDKRALAAAYDMFLADDRVLPYLKGHLGTKFFVKKKQPIAVRVSRK-SLAASLRLASRRTAFHVSAGVCNNVKVACLDMTPEQIVENIMVAMNNCAN-LVPKGWNGVQSISVKTSDSVALPVYNA-LATLAKLPP 254          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig692.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5C3_ECTSI1.420e-5145.80Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2CVK6_9STRA1.830e-4151.20Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2SVD8_9STRA2.040e-3748.80Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
D0N113_PHYIT5.650e-3544.32Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
A0A3M6VNB9_9STRA5.820e-3543.18Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A225WZF5_9STRA1.380e-3441.48Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A6A4D992_9STRA6.110e-3443.75Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
F0WX21_9STRA1.010e-3344.51Uncharacterized protein AlNc14C340G10778 n=1 Tax=A... [more]
A0A024G4U6_9STRA1.850e-3343.90Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
G4YF28_PHYSP1.880e-3342.61Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 186..206
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 240..546
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..274
NoneNo IPR availablePANTHERPTHR23105:SF31RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1coord: 1..209
NoneNo IPR availablePANTHERPTHR23105RIBOSOMAL PROTEIN L7AE FAMILY MEMBERcoord: 1..209
IPR028364Ribosomal protein L1/ribosomal biogenesis proteinPFAMPF00687Ribosomal_L1coord: 2..159
e-value: 4.5E-35
score: 121.2
IPR028364Ribosomal protein L1/ribosomal biogenesis proteinCDDcd00403Ribosomal_L1coord: 2..163
e-value: 6.81667E-19
score: 83.3875
IPR016095Ribosomal protein L1, 3-layer alpha/beta-sandwichGENE3D3.40.50.790coord: 1..99
e-value: 4.7E-9
score: 38.2
IPR023674Ribosomal protein L1-likeSUPERFAMILY56808Ribosomal protein L1coord: 2..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig692contigP-wetherbeei_contig692:4987..7665 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig692.4.1mRNA_P-wetherbeei_contig692.4.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig692 4509..7696 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig692.4.1 ID=prot_P-wetherbeei_contig692.4.1|Name=mRNA_P-wetherbeei_contig692.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=547bp
MCLFVKEGSKDSVKKMLEATPVEGLSKVITLEKLRTAYKTFAARRELMAQ
YDLFLCDDRILPMMTKALGKTFLAARKQPVAVRITRKTSLPLAVARARDA
TFLIPSYGVCWGLKVATIDMPAEHVVDNVVAAVARAADKMIPGGWKNIQG
LHLQATGSVALPIYSAVLETIAPEPPSPPGAAEEDAAKAEAAAARAKARA
EKAAKRRIKSPLLKAQLRKLAHGEKAAAAAAEVGELGGAAKAAKENSDPK
GASAPSTAAGEGGGTTTPSSKKPKKQTPKAAAGSMVVAAAPTEAKAAPAK
LPESKKRPAADVAAAANGVDAAASAPKKAKAKSAEEAAGSSTATAAAPPP
SGKKSDRKRPSPSEDTLQPGTATVATPAAKKSKRVATPAVTAVAAANGEK
AKEAAAAAVVVTSAAKGTARKAKTAKPATPAPATKTVIPAATPAAPSAAT
PAAAMSMAAPANPSGTATPAVKAVNSKAAASGAKSRKAMAAAAPASDKAG
ASGAAAAAAAPKKALEAAAAPRKSAKKAVAATPKSAAGKRKTRSEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028364Ribosomal_L1/biogenesis
IPR016095Ribosomal_L1_3-a/b-sand
IPR023674Ribosomal_L1-like