prot_P-wetherbeei_contig6158.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6158.1.1
Unique Nameprot_P-wetherbeei_contig6158.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length555
Homology
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: A0A836CEF2_9STRA (DNA-directed RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEF2_9STRA)

HSP 1 Score: 498 bits (1281), Expect = 8.210e-162
Identity = 274/564 (48.58%), Postives = 354/564 (62.77%), Query Frame = 0
Query:   17 YRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDAIADEQAKVWRQERGPDRPLYGPLMVLLQADKLALLTLHELVGHVLQTGNSGMPTVTACLAVADAIQMEVNLCRLQKTLGGEAVLAALQRSGRSQVRQVNNKAKRALDMLDVTDWPKSVKVKLGAMLLKLMMDTATL---------EDNGGCAFIHQMVNVTNKNRLPAKSQKGRIQMKEAAYRLMVRQSGGMAQLMTMRYLPMLVEPRPWTRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRGLEVGELPSQRDLPEPXXXXXXXXXXXXXXXXXXDTLV-----------------LARRMHNKMLKRVRQHNRNLHSLRCDHKLKMELAEKFRDHAFYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPL-DGGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVS 553
            YR++ E +   G    +R +QR+LL+W+ PLR AI +EQ +VW  ERG     +GPL+VLLQ +KLA++ +HE +   LQ GN+G+P    CL +A+A Q EVNL ++Q+ LG +A +A L+ S R  VR+VN +AKRALDML+VTDWP ++KV+LGA+L+KL+ DTA +         E     AF H++       +L A  + G + +  AAY+ +  Q   +A LM  RYLPMLV+P+PW R DRG Y+ LK  +MR RGC+ QVDALR A LD+       V+ GLN L    WR+N +V+ +A+EAW R L +GELP Q DLP P                     V                 +AR  H + L    Q N + HSLR D ++KM +AE+F     YFPYN+DFRGRAYPVPPNLNHMG+DF RGVL F   RPLG RG YWLK+  A+L+G+ K+SFDERAA+ D H   +  SAE PL DG  WW   + PWQCLA C EL  AA   G P T++SRLPVHQDG+CNGLQHYAALGRD AGGEQV+
Sbjct:  185 YRELAEGMVAGGRAGALRPLQRELLKWFIPLRAAIEEEQGRVWANERGAGMGAHGPLLVLLQPEKLAVMVMHETLNLTLQGGNAGVPAAGLCLRLAEAAQAEVNLLKMQRKLGSKAQVA-LRGSARRHVREVNIRAKRALDMLEVTDWPDALKVQLGAVLVKLLCDTAKVTPEATRGQPEPTPEAAFRHEI------RQLRANKKLGMLFLTPAAYKRV--QDWNLAGLMQPRYLPMLVKPKPWQRHDRGGYIMLKARIMRTRGCRSQVDALRVAKLDK-------VYHGLNCLGSVPWRVNDEVYAIAKEAWDRKLTIGELPPQEDLPVPPMPKTKMYKKGSSRKGKGGAEVDNTPPTPEEHARWRENEIARLAHARAL----QLNLDRHSLRSDLRIKMRIAERFAGRDMYFPYNLDFRGRAYPVPPNLNHMGNDFCRGVLTFARTRPLGARGLYWLKVQAASLFGEDKLSFDERAAYADAHMDAIRRSAEDPLGDGNDWWIRADSPWQCLATCKELI-AAIDSGDPKTFESRLPVHQDGTCNGLQHYAALGRDAAGGEQVN 727          
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: A0A6H5JU39_9PHAE (DNA-directed RNA polymerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JU39_9PHAE)

HSP 1 Score: 452 bits (1163), Expect = 1.950e-143
Identity = 263/607 (43.33%), Postives = 361/607 (59.47%), Query Frame = 0
Query:    1 MQIAWELESQRKAMDSYRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDAIADEQAKVWRQERGPD------------RPLYGPLMVLLQADKLALLTLHELVGHVLQTGNSGMPTVTACLAVADAIQMEVNLCRLQKTLG--GEAVLAALQRSGRSQVRQVNNKAKRALDMLDVTDWPKSVKVKLGAMLLKLMMDTA-----------TLEDNGGC-----------------AFIHQMVNVTNKNRLPAKSQKGRIQMKEAAYRLMVRQSGGMAQLMTMRYLPMLVEPRPWTRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRGLEVGELPSQRDLPEPXXXXXXXXXXXXXXXXXX-----DTLVLARRM-----HNKMLKRVRQHNRNLHSLRCDHKLKMELAEKFRDHAFYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPLDGGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVSRS 555
            MQ+  E +S ++A + Y +M++ L   G G  M++++R L  WY  L+++I  EQ  VW      +            R  YGP +V+L+ADK A+L +HE+V  +L +GN G+ TV AC  VA+ +Q EVNL R++K  G  G+ V  +  R     VR+VN +A+ ALDML+ T WP   +VKLGA L+KL+++TA           T  D GG                  AF+H ++  T K+     S++G + M    +  MV +   +++L T R++PMLV P  W   +RG +L+L+  +MR +G   Q  ALR ADL +       V++GLN L + RWR+N  V D      R  + VG+LP   DLP P                       D  V   R      + ++L++ +Q N N+HSLRCD K+K+++A++FRDH  YFPYN+DFRGR YP+PPNLN +GSDFSRGVLMFDEA+PLGE+G YWLK+H ANLYG+ K+SFD+R AFV+++   V DSA RPL+G  WWKG + PWQCLAVC +L+ A  +P  PA Y SRLPVHQDGSCNGLQHYAALG D  GG QV+ S
Sbjct:  288 MQLEREDQSHQEACEKYGKMMKELMTMGKGTQMKSIERLLTTWYPALKESIEREQEAVWANLTDDNKGTVKTSGSFGGRGTYGPFLVMLKADKQAVLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNLMRMKKKDGKKGQPVKVSSLR----HVRKVNKQAQDALDMLEDTHWPIGAQVKLGAALIKLLIETACWTYDKESGVVTAWDKGGAERGGGERDTEGFPMPKAAFVHDII--TGKS-----SRRGTLTMAPEIFSKMVDED--ISRLATPRFVPMLVPPLDWVTPNRGGFLRLRAQIMRTKGEAAQKHALRRADLRR-------VYKGLNCLGKVRWRINGHVLDTVMVCLRDKIAVGDLPVIEDLPLPPRPDGVTVGRLGRLRAPVQGEDEDEGVFKERRQKHYAYKRLLEKTKQKNANMHSLRCDMKIKVDIAQEFRDHVIYFPYNMDFRGRTYPIPPNLNILGSDFSRGVLMFDEAKPLGEKGLYWLKVHLANLYGEDKVSFDDRVAFVEKNMDKVRDSALRPLEGECWWKGADSPWQCLAVCADLTAALDSPD-PARYLSRLPVHQDGSCNGLQHYAALGLDANGGAQVNLS 873          
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: A0A4D9D3J6_9STRA (DNA-directed RNA polymerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3J6_9STRA)

HSP 1 Score: 386 bits (991), Expect = 8.710e-119
Identity = 240/622 (38.59%), Postives = 344/622 (55.31%), Query Frame = 0
Query:    1 MQIAWELESQRKAMDSYRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDAIADEQAKV----WRQERGPDRPLYGPLMVLLQADKLALLTLHELVGHVLQTGNSGMPTVTACLAVADAIQMEVNLCRLQKTLGGEAVLAALQRSGRSQVRQVNNKAKRALDMLDVTDWPKSVKVKLGAMLL---------------------------------------KLMMDTATLEDNGGC----AFIHQMVNVTNKN--RLPAKS----------QKGRIQMKEAAYRLMVRQSGGMAQLMTMRYLPMLVEPRPWTRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRGLEVGELPSQRD--LPEPXXXXXXXXXXXXXXXXXXDTLVLARRMHNKML--------KRVRQHNRNLHSLRCDHKLKMELAEKFRDHAFYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPLDGGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVS 553
            +++A+E  +  +A+  Y+++ ++L + G    +  V+RQ+  WY P+ +A+    AK+    W  + G     YGP ++L+  DKLA++T++E V  +L+ GN G+P     L +ADA++ EVN  RL +T G + VL  L+ +G   +++VN KA+ AL+  D   W   +K+K+G MLL                                       ++ +    L+  GG     A     +   N+   R PA S          ++G + + EA YR M   +  +   +T RY PM+V+PRPW   D G YLQLK+ ++R +  + Q DALR A + +       V+  LN L R  W +N +V    +EA+ RGL VG+LPSQ D  +P                    +  V  RR   + L        +RV++ N  L SLRCD ++K+ +AE+FR+H FYFPYN+DFRGRAYPVPPNLNH+GSD  RG+L F E RPLG+ G  WLKIH ANL G+ K+SFD+R AFV+    +V DSA RPL+G GWW+  E+PWQ LAVC E+  AA   G P ++ S +PVH DGSCNGLQHYAALGRDE G +QV+
Sbjct:  206 LEVAFEEGTISEALGEYKEVQDTLFRTGKAAYLPVVKRQIFAWYGPMIEAMTALHAKLREGKW-SDLGNGVGTYGPFLILVPPDKLAVITVNETVNLILRHGNQGVPLTMLLLHIADAVRTEVNFLRLSETYG-DRVLNILRENGMISLKRVNRKAREALE--DGV-WRADLKIKVGGMLLSELHRVAKISPECVQDGAEEAHGLEGPEVGSVREKSREKRMRLQAPRLDQAGGGVEGGADSTDALTSANREAERPPALSIALESTRSIKKRGLVFLDEAVYRSMAG-AADVQHYLTPRYRPMVVQPRPWKSFDSGGYLQLKSFIVRSQNSKAQFDALRGARMPE-------VYHALNFLGRVPWVINGEVLSTIQEAYARGLTVGDLPSQLDELVPPLSGHPSHPPPADPALLGAEEDGVPGRRAEERRLLRDRWQIARRVKKRNAELFSLRCDTEIKLSIAEEFRNHTFYFPYNLDFRGRAYPVPPNLNHLGSDMCRGMLRFAEKRPLGKNGLRWLKIHLANLCGQDKLSFDDRVAFVEGKMENVQDSAARPLNGHGWWQKAEEPWQALAVCKEIV-AAVESGDPESFLSGVPVHMDGSCNGLQHYAALGRDEEGAKQVN 813          
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: F0XZ85_AURAN (DNA-directed RNA polymerase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZ85_AURAN)

HSP 1 Score: 372 bits (956), Expect = 1.810e-115
Identity = 224/573 (39.09%), Postives = 317/573 (55.32%), Query Frame = 0
Query:    2 QIAWELESQRKAMDSYRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDAIADEQAKVWRQERGPDRPLYGPLMVLLQADKLALLTLHELVGHVLQTGNSGMPTVTACLAVADAIQMEVNLCRLQKTLGGEAVLAALQRSGRSQVRQ---------------VNNKAKRALDMLDVTDWPKSVKVKLGAMLLKLMMDTATLEDNGGCAFIHQMVNVTNKNRLPAKSQKGRIQMKEAAYRLMVRQSGGMAQLMTMRYLPMLVEPRPWTRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRGLEVGELPSQRDL--PEPXXXXXXXXXXXXXXXXXXDTLVLARRMHNKMLKR---VRQHNRNLHSLRCDHKLKMELAEKFRDHA-FYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPLDGGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVS 553
            Q+  E E+   A   Y  M+E L   G G  ++ VQR + +WY PL   I  E+      ++G D  +YGPL++LL  ++LA+LT+H  +G  L+ G  G         + + +Q E  + +L + L  E + AA    G+  V +               VN++AKRAL+  D TDWP   + KLG+ L+  ++D A  +D+ G   +   +  +N  ++     K  + +  A     +R++         R+LPMLVEPR W   D G +L+L+   MR  GC  Q++A R A   +       V  GL+A+ +  W +N  VFD+ + AW  G +  +LPSQ DL  PEP                        +++++  L+R   +++ N  LHSLRCD  LK+ +AE+F+D A FYFPYNVDFRGRAYPVPPNLNH+GSD  R +L F EA+ LG+ G +WL+IH ANL+G  K S D+RAAF   H AD+ D+ ERP+DG  WW   ++PWQ LA C EL++AA     P  Y+  LPVH DGSCNGLQHYAALGRD  GG QV+
Sbjct:   77 QLELEEETLEAACADYEAMIEDLLSLGKGAELKPVQRLMAQWYEPLVTRITAERKATLDGDKGGDLRIYGPLLLLLPPEQLAVLTMHTTIGLCLKHGPLGAKYSNLVTTLGETVQAEARVLKL-RNLRRERLKAAEDAEGKRAVPKTFLDARALARLPTHVVNSRAKRALEEGDDTDWPTITRAKLGSALVMALLDVA--KDDAGSPLLEHTIVYSNARKIGIIRAKDEL-LSHARCPETIRRAA------MPRFLPMLVEPRRWRAYDEGGFLRLRAVAMRTHGCALQMEAFRNARGIEG-----GVLAGLDAMGKVPWAVNGPVFDLVKAAWASGGKWPDLPSQEDLALPEPMDLAEALARADGDEDG-------GKKLYDAHLRRSARLKRRNAELHSLRCDTLLKLSIAEQFKDEAAFYFPYNVDFRGRAYPVPPNLNHLGSDVCRAMLTFAEAKRLGDDGLFWLRIHLANLFGLSKKSLDDRAAFAVAHEADIRDAYERPMDGNMWWLEADEPWQALAACRELARAAEL-DDPRDYECALPVHADGSCNGLQHYAALGRDHEGGRQVN 626          
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: A0A7S2HVK7_9STRA (DNA-directed RNA polymerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HVK7_9STRA)

HSP 1 Score: 368 bits (945), Expect = 7.010e-114
Identity = 221/582 (37.97%), Postives = 322/582 (55.33%), Query Frame = 0
Query:   17 YRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDAIADEQAKVWRQERGPDRPLYGPLM--------------VLLQ--ADKLALLTLHELVGHVLQTGNSGMPTVTA----------CLAVADAIQMEVNLCRLQKTLGGEAVLAALQRSGRSQVRQVNNKAKRAL------------------DMLDVTDWPKSVKVKLGAMLLKLMMDTATLEDNGGCAFIHQMVNVTNKNRLPAKSQKGRIQMKEAAYR-LMVRQSGGMAQLMTMRYLPMLVEPRPWTRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRGLEVGELPSQRDLPEPXXXXXXXXXXXXXXXXXXDTLVLARRMHNKMLKRVRQHNRNLHSLRCDHKLKMELAEKFRDHAFYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPLDGGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVS 553
            Y +++  ++K G    MR  +  + +W     + I  E+    R+E  PDR +YGP+               V+ Q  A KLA++TLH +V  +    +SGM   +A          C ++A+ ++ E NL  L+K    E  L   Q        + + +  +AL                  D+L+  +W   +KVK+GA+L+K++++ A  + +G  AF H+ +     +++      G + M + AY  L   +   +AQ+   R LPM+V P+PW R D+G YL + T +MR  G +   DALR ADLDQ       V  GLNAL +  WR+N +V DVAREAW + + + ELP + D+PE                   D   L R+ H    K++ ++N  LHS RCD  LK+ +A++ RD+  YFPYN+DFRGRAYP+PPNLNH+GSD  RG+L F++ +PLGE+G +WLK+H ANLYG  K +F++R  F  +H ++V DSA RPL+G  WW   E PWQ LAVC EL++A + P  P  ++S +PVH DGSCNGLQHYAALGRD  GG  V+
Sbjct:   55 YEELMSDMKKMGKLTHMRQAESVISKWLPQAAEMIDQEKEAFERKEAAPDRKVYGPIFCGLDSVTHRNGKKNVITQSGAFKLAVITLHTMVNSI----SSGMGAHSAADKGVGFRFLCKSIANGVESEYNLSLLRKK---EKELKKNQSEESKAEHKDSKQLNKALMSPGLTSADARRLRIRVRDVLEENEWGIDMKVKVGAILIKIVLE-ACKDRDGNPAFRHETIQAKYAHKV------GSVIMSDCAYEELCGTEHKPLAQI---RDLPMVVPPQPWLRWDKGGYLSVPTKIMRTHGYRAHSDALRVADLDQ-------VLAGLNALNKLPWRVNHEVLDVAREAWDQRMAIAELPERTDIPE-----------LEPLSEEEDADPLIRKRHYWQQKKIIRNNCELHSQRCDTILKLNIAQENRDYVIYFPYNLDFRGRAYPIPPNLNHLGSDLCRGLLKFEKKKPLGEKGLWWLKVHLANLYGFDKANFNDRMQFTMDHMSEVYDSAARPLEGNRWWTKAESPWQVLAVCKELTEALSHPN-PEAFESGMPVHMDGSCNGLQHYAALGRDVEGGASVN 600          
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: A0A8J2SIS3_9STRA (DNA-directed RNA polymerase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SIS3_9STRA)

HSP 1 Score: 361 bits (927), Expect = 2.220e-110
Identity = 222/583 (38.08%), Postives = 308/583 (52.83%), Query Frame = 0
Query:    2 QIAWELESQRKAMDSYRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDAIADEQAKVWRQERGPDRPLYGPLMVLLQADKLALLTLHELVGHVLQTGNSGMPTVTACLAVADAIQMEVNLCRLQKT--------------LGGEAVLAALQ-RSGRSQVRQ-----------VNNKAKRAL--DMLDVTDWPKSVKVKLGAMLLKLMMDTATLEDNGGCAFIHQMVNVTNKNRLPAKSQKGRIQMKEAAYRLMVRQSGGMAQLM---TMRYLPMLVEPRPWTRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRGLEVGELPSQRDLPEPXXXXXXXXXXXXXXXXXXDTLVLARRMHNKMLKRVRQHNRNLHSLRCDHKLKMELAEKFRDHAFYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPLDGGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVS 553
            QI  E E   KA   Y  MV+ L   G G  ++ VQ  +  WY PL D I +E+       + PD  +YGPL++LL  ++LA+LT+H ++GH L+ G  G    +   A+ +AIQ+E  + R+++               L  E    AL+ + GR +              VN +AK+AL  D  D  DWP   + KLG +L+   +D A +++ G   F H +V             K ++ +  A+  L+ R  G    L    T R+LPMLVEPRPW    +G +L+L+   MR  GC    D  R A L         V  GL+A+ R  W +N  + D+ +EAW++G    +LPS  D                           A+ +H +   ++R+ N  LHSLRCD  LK+++AE+FR+ AFYFPYNVDFRGRAYP+PPNLNH+GSD  R VL F E + LG+ G YWL++H ANL+G  K S +ER  F  +  AD++DS   P+ G  WW   E+PWQ LA   EL +A+     P  +   LPVH DGSCNGLQHYAALGRD  GG+QV+
Sbjct:   90 QIETEEECLEKASADYAAMVDELMALGKGAELKPVQALVASWYEPLVDVIVEERNNALAGAKSPDLKIYGPLLLLLPPEQLAVLTMHHVLGHCLKHGEPGAKYSSLVTALGEAIQVEARVLRVRQQRRRHLASRRGESDELANEEAKEALKAKLGRGRFLDAKALARLPQHVVNARAKKALEEDDADDADWPTMTRAKLGGVLVTRFLDVA-VDNEGNRLFEHDVVV----------KLKRKVGVVRASKELLQRARGDPIMLQWAATPRFLPMLVEPRPWRGFQKGGFLRLRAAAMRTHGC----DVQREAFLRANRGLADGVLAGLDAMGRVPWSINGPILDLVQEAWQQGGTWPDLPSLHDFEIREYEGDDPE---------------AKELHGRRNAKLRRKNAELHSLRCDTTLKLDIAERFRNDAFYFPYNVDFRGRAYPLPPNLNHLGSDVCRAVLQFAEPKRLGDDGLYWLRVHLANLFGLAKRSLEERHQFALDRHADILDSFTNPMRGKQWWLEAEEPWQALACICELGRASLLED-PRDHLCALPVHMDGSCNGLQHYAALGRDREGGKQVN 641          
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: A0A7S1VRP7_9EUKA (DNA-directed RNA polymerase n=1 Tax=Sexangularia sp. CB-2014 TaxID=1486929 RepID=A0A7S1VRP7_9EUKA)

HSP 1 Score: 343 bits (881), Expect = 5.000e-105
Identity = 219/584 (37.50%), Postives = 307/584 (52.57%), Query Frame = 0
Query:   28 GLGEGMRAVQRQLLRWYRPLRDAIADEQAKVWRQER-------------------GPDRPLYGPLMVLLQADKLALLTLHELVGHVLQTGNSGMPTVTACLAVADAIQMEVNLCRLQ---KTLGGEAVLA----ALQRSGRSQVRQVNNKAKR--------ALDMLDVT---------DWPKSVKVKLGAMLLKLMMDTATL------EDNGGC--------AFIHQMVNVTNKNRLPAKSQKGRIQMKEAAYRLMVRQSGGMAQLMTMRYLPMLVEPRPWTRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRGLEVGELPSQRDLPEPXXXXXXXXXXXXXXXXXXDTLVLARRMHNKMLKRVRQHNRNLHSLRCDHKLKMELAEKFRDHAFYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPLD-GGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVS 553
            GL   ++  Q+ L+ WY+PL  AI DEQ +V R  R                   G DR +YGP ++L+ A KLA++T+HE +G  L++G  G+   +A + +  A+  E +L  LQ   K  GG ++ +    AL++  R +   + N A          A D  DV+         +WP ++ VK+G+ L+  ++DTA++      ED+G          AF+H       K     ++    +++ +A ++L         + M   YLPM+V PRPW   D G YL   T VMR RG + Q  AL  ADL         V+  L+ L  T W +N  VF+VA EAW+ G  +GELP + D+P P                  D  +  RR      +   + N  LHSLRCD   K+++A++F    FYFP+NVDFRGRAYPVPP+LNH+G+D  RG+L F E  PLGE G  WLKIH ANL+G  K++FDER A+V+     + ++A  PLD  G  W   + PWQ LA C EL+ A +    P T+ SRLPVHQDG+CNGLQHYAALG D  G   V+
Sbjct:    8 GLAATLKPAQKILVTWYQPLVKAIKDEQREVLRVLRKEAREEGSETSGSSSKYDSGIDRHVYGPFLLLMSAQKLAVITMHEALGMALRSGTVGVTFTSAAVQIGKAVHTEAHLQVLQGGGKGSGGRSLKSVTPSALRKLRRRKAAVLRNDADAPAGTIAGTAGDAKDVSYELPDPSVAEWPTAMLVKVGSALIARLLDTASIHETIHVEDDGQFSTAGAQVPAFVHAYRVERGKRSGILRTHPSVLKLVDAGHKL--------RESMAAHYLPMVVPPRPWRDMDDGGYLATPTRVMRTRGSKLQARALAQADLTD-------VYAALDVLGGTPWTVNDRVFEVAMEAWKAGGGLGELPQRSDVPIPERLPHGGA----------DASLEERRRAAMDFRAALKRNAELHSLRCDTTYKLQVAKEFSGRTFYFPHNVDFRGRAYPVPPHLNHVGNDLCRGILTFAEGMPLGEDGLRWLKIHLANLFGHNKLTFDERIAWVESQLPAIREAARAPLDPSGSHWLDADDPWQALAACFELTDALSCTD-PTTFVSRLPVHQDGTCNGLQHYAALGGDIDGAVAVN 565          
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: A0A7S3JVN8_9STRA (DNA-directed RNA polymerase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVN8_9STRA)

HSP 1 Score: 346 bits (888), Expect = 7.730e-105
Identity = 218/561 (38.86%), Postives = 310/561 (55.26%), Query Frame = 0
Query:   12 KAMDSYRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDAIADEQAKVWRQERGPDRPLYGPLMVLLQADKLALLTLHELVGHVLQTGNSGMPTVTACLAVADAIQMEVNLCRLQ-------KTLGGEAVLAALQRSGRSQVRQVNNKAKRALDMLDVTDWPKSVKVKLGAMLLKLMMDTATLEDNGGCAFIHQMVNVTNKNRLPAKSQKGRIQMKEAA-YRLMVRQSGGMAQLMTMRYLPMLVEPRPWTRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRG-LEVGELPSQRDLPEPXXXXXXXXXXXXXXXXXXDTLVLARRMHN---------KMLKRVRQHNRNLHSLRCDHKLKMELAEKFRD-HAFYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPLDGGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVS 553
            KA   Y++MV+ L + G G  +  VQ+ LL WY PL   I  E+       R  DR +YGPL++LL+ ++ A++TLH ++   +Q    G+        +   I  E+ L RL+       K       L AL  S  S++  VN + ++ L   D  +WP+S   KLG+ L+  +M  AT  +     F H++ N T KN   AK   G + + +   +   + +   M      RYLPM++ PRPW   +RG YL+L+ ++MR  G   Q+DA+R A + +       +++GLNALA+  WR+N ++ ++   AW +      E          XXXXXXXXXXX       D  +    +H          + ++++R+ N   HSLRCD  +K+++A  F+D  AFYFPYN+DFRGRAYP+PPNLNH+GSD  R +L F EA+PLG  G YWL++H ANL+GK K S  ER  F   +  ++  SA+ P     WW   ++PWQ LA C E+S A   P GP  YKS LPVH DGSCNGLQHYAALGRD  GG+QV+
Sbjct:  114 KACAEYKKMVQDLVRLGKGSELGPVQKALLSWYEPLTIRINQEKKDFINGIRSEDRSIYGPLLLLLKPEEFAVITLHNVLSSTMQASVHGVKYSALISTIGQEIMTEIRLNRLKQKEKENKKNKKYSFNLKALINSRSSKL--VNIRTRKILSESDGLEWPRSTLAKLGSFLINELMQVATCPNTNEALFKHKIEN-TFKNGKVAKL--GLVYISQPLLHESWIEEV--MHHCAMPRYLPMVIPPRPWEDINRGCYLKLRPDLMRTNGNIDQIDAIRRAQMPK-------IYDGLNALAKVPWRINKEMLEIIDTAWHQAQCRFPEXXXXXXXXXXXXXXXXXXXXXNLTKIVTDDEIDPDHIHKLKQHCTNYYRRIRKIRKINTEQHSLRCDLLIKLKIAHDFKDDQAFYFPYNLDFRGRAYPIPPNLNHLGSDVCRSMLTFAEAKPLGTNGLYWLRVHLANLFGKSKSSLQERVQFTINNQQNIFASAQEPFQTN-WWLEADEPWQALATCKEISAALNYPDGPENYKSSLPVHADGSCNGLQHYAALGRDHEGGKQVN 659          
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: A0A482SYF4_9ARCH (DNA-directed RNA polymerase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SYF4_9ARCH)

HSP 1 Score: 338 bits (867), Expect = 8.750e-105
Identity = 205/561 (36.54%), Postives = 325/561 (57.93%), Query Frame = 0
Query:    2 QIAWELESQRKAMDSYRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDAIADEQAKVWRQERGPDRPLYGPLMVLLQADKLALLTLHELVGHVLQTGNSGMPTVTACLAVADAIQMEVNLCRLQKTL-GGEAVLAALQR-----SGRSQVRQVNNKAKRALDMLDVTDWPKSVKVKLGAMLLKLMMDTATLEDNGGCAFI--HQMVNVTNKNRLPAKSQKGRIQMKEAAYRLMVRQSGGMAQLMTMRYLPMLVEPRPW-TRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRGLEVGELPSQRDLPEPXXXXXXXXXXXXXXXXXXDTLVLARRMHNKMLKRVRQHNRNLHSLRCDHKLKMELAEKFRDHAFYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPLDGGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVS 553
            Q A EL+ + +A    ++++ +L++ G     + V   L  WY PL  A+ +E+  + ++ +G DR +YGP ++LL  D++A++ L  +VG +L++  S +  VT    +  A++ E+NL RL+      +A + A+++     + + +  +V    ++ L+  D   W  ++K K+G  L++ ++ T  +  NG   F   ++  + TNK           + M   AY+L+         ++  R+ PM+V P+PW ++A  GAYL LK  +M++   + QVD +R A++         V EGL+ L +T WR+N  VFDV  EA  +G+++GE+PS  +L EP                  D   + + ++ +M +RV + N  LHSLR D ++K+++AE+F++   +FP+N+DFRGRAYPVPPNL+HMGSD  RG+L+F EA+ LGE G  WLKIH ANL G  K+ +D+R A++D H  ++ +SA  PL G  WW   E P+Q LA C+EL+ A   P  P  +K  LPVHQDGSCNGLQHYA LGRD  GG+ V+
Sbjct:  103 QEAIELKIEEEAKYDRKELLVNLRRIGQSTSTQKVHHGLASWYEPLAQALKEEEEMIKKKIKGVDRQVYGPYLMLLPLDRVAIVALDVVVGQILRSDKS-VKIVTLLTEIGSALENELNLERLRAMKRNNKAAMFAMKKLEELANNKKETGRVYKNVRKVLN--DPEGWSPAIKTKIGGFLVETLVKTLHMP-NGEPVFTCKYEYNDRTNKKAAV-------LVMSPLAYQLV--DDSKNVGVIDPRWKPMVVPPKPWNSQAFYGAYLHLKAPLMKYSS-RFQVDVVRKANIKP-------VLEGLDYLGKTPWRVNQRVFDVVLEAESKGMQLGEIPSAVNLVEPKKEDYLPPGQE-------DPSKVNQILYGQMKRRVAKRNAELHSLRQDMRIKLDIAEEFKNDMIFFPHNLDFRGRAYPVPPNLSHMGSDMCRGLLVFAEAKELGETGLRWLKIHLANLCGYNKVPYDQRVAWIDAHMGNIRESALHPLSGEMWWSTTESPFQALAACIELANAYELPD-PTKHKCALPVHQDGSCNGLQHYAGLGRDALGGKAVN 634          
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: D2VYC1_NAEGR (DNA-directed RNA polymerase n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VYC1_NAEGR)

HSP 1 Score: 344 bits (882), Expect = 2.380e-104
Identity = 204/560 (36.43%), Postives = 311/560 (55.54%), Query Frame = 0
Query:   17 YRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDAIADEQAKV-------------WRQERGPDR---PLYGPLMVLLQADKLALLTLHELVGHVLQTGNSGMPTVTACLAVADAIQMEVNLCRLQKTLGGEAVLAALQRSGRSQVRQVNNKAKRALDMLDVTDWPKSVKVKLGAMLLKLMMDTATLE-----DNGGCAFIHQMVNVTNKNRLPAKSQKGRIQMKEAAYRLMVRQSGGMAQLMTMRYLPMLVEPRPWTRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRGLEVGELPSQRD--LPEPXXXXXXXXXXXXXXXXXXDTLVLARRMHNKMLKRVRQHNRNLHSLRCDHKLKMELAEKFRDHAFYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPLDGGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVS 553
            YR+ ++S   R     +   ++ +L WY PL   I ++Q +V                    D    PLY   +  + A+KLA++TLHEL+   L+    G P  +    + DAIQ E+N+ +L++T   + ++       ++Q+   N      L + +   + K   V+LG+ L++L + TA +           AFIH+  N+T  +++      G ++  +    L+ R+     +++   +LPMLV P PWT +  G Y+ LK  +MR RG   Q   L++A+L+  L        GLN L  TRWR+N  V++   + W  G  +GELPS+ D  LPE                         ++   + +++++ HNRNLHSLRCD  LK+++AE F+D+ FYFP+N+DFRGRAYP+PP+LNH+G+D +RG+L F++  P+G+RG +WLKIH ANLYGK K+ FDER  FVDE+  +++DSA++PL+G  WW   E PWQ LA C+EL++   +P  P  + S LP+  DGSCNGLQHYAALGRD  G   V+
Sbjct:  146 YRKDLKSATSRNQSACLPPAKKIMLEWYEPLTKIIREKQDEVNFSCSKKXXXXXXXXXXXSQDNFAIPLY---LTSISAEKLAIITLHELLASCLKE-RGGSPVSSISYQIGDAIQAEINVEKLKRTNYFKLII-------KNQMIYHNINKISKLKLNEYVTFTKEELVQLGSYLIQLALSTAHVPLISNPKETVPAFIHR--NITRNSKII-----GVVEPDDNLLHLIGREHVAQ-EILYPNHLPMLVPPNPWTSSTAGGYIALKVLIMRTRGSHLQAYTLKSAELNDLL-------SGLNTLNETRWRINPTVYETVLKVWNSGGGLGELPSRFDDTLPEEPETDDPE----------------IKKKWKRTVEKIKTHNRNLHSLRCDMLLKLKVAEDFKDNTFYFPHNIDFRGRAYPIPPHLNHLGADINRGLLTFEKGMPIGKRGIFWLKIHLANLYGKDKLPFDERVQFVDEYINEIIDSADQPLEGNRWWLKSENPWQTLAACVELAECLRSPN-PEEFLSHLPIQMDGSCNGLQHYAALGRDNLGALHVN 662          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CEF2_9STRA8.210e-16248.58DNA-directed RNA polymerase n=1 Tax=Tribonema minu... [more]
A0A6H5JU39_9PHAE1.950e-14343.33DNA-directed RNA polymerase n=2 Tax=Ectocarpus Tax... [more]
A0A4D9D3J6_9STRA8.710e-11938.59DNA-directed RNA polymerase n=2 Tax=Monodopsidacea... [more]
F0XZ85_AURAN1.810e-11539.09DNA-directed RNA polymerase n=1 Tax=Aureococcus an... [more]
A0A7S2HVK7_9STRA7.010e-11437.97DNA-directed RNA polymerase n=1 Tax=Dictyocha spec... [more]
A0A8J2SIS3_9STRA2.220e-11038.08DNA-directed RNA polymerase n=1 Tax=Pelagomonas ca... [more]
A0A7S1VRP7_9EUKA5.000e-10537.50DNA-directed RNA polymerase n=1 Tax=Sexangularia s... [more]
A0A7S3JVN8_9STRA7.730e-10538.86DNA-directed RNA polymerase n=1 Tax=Aureoumbra lag... [more]
A0A482SYF4_9ARCH8.750e-10536.54DNA-directed RNA polymerase n=1 Tax=archaeon TaxID... [more]
D2VYC1_NAEGR2.380e-10436.43DNA-directed RNA polymerase n=1 Tax=Naegleria grub... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 7..27
NoneNo IPR availableGENE3D1.10.287.280coord: 439..514
e-value: 7.2E-29
score: 101.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 327..347
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 333..347
NoneNo IPR availablePANTHERPTHR10102:SF0DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIALcoord: 7..552
IPR029262DNA-directed RNA polymerase, N-terminalSMARTSM01311RPOL_N_2coord: 1..303
e-value: 5.3E-49
score: 178.8
IPR029262DNA-directed RNA polymerase, N-terminalPFAMPF14700RPOL_Ncoord: 2..302
e-value: 2.6E-55
score: 188.2
IPR024075DNA-directed RNA polymerase, helix hairpin domain superfamilyGENE3D1.10.287.260coord: 304..400
e-value: 4.1E-5
score: 25.9
IPR002092DNA-directed RNA polymerase, phage-typePFAMPF00940RNA_polcoord: 439..552
e-value: 2.9E-50
score: 171.4
IPR002092DNA-directed RNA polymerase, phage-typePANTHERPTHR10102DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIALcoord: 7..552
IPR002092DNA-directed RNA polymerase, phage-typePROSITEPS00900RNA_POL_PHAGE_1coord: 526..537
IPR037159DNA-directed RNA polymerase, N-terminal domain superfamilyGENE3D1.10.1320.10coord: 1..302
e-value: 2.3E-57
score: 196.6
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 2..552

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6158contigP-wetherbeei_contig6158:51..3420 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6158.1.1mRNA_P-wetherbeei_contig6158.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6158 42..3420 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6158.1.1 ID=prot_P-wetherbeei_contig6158.1.1|Name=mRNA_P-wetherbeei_contig6158.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=555bp
MQIAWELESQRKAMDSYRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDA
IADEQAKVWRQERGPDRPLYGPLMVLLQADKLALLTLHELVGHVLQTGNS
GMPTVTACLAVADAIQMEVNLCRLQKTLGGEAVLAALQRSGRSQVRQVNN
KAKRALDMLDVTDWPKSVKVKLGAMLLKLMMDTATLEDNGGCAFIHQMVN
VTNKNRLPAKSQKGRIQMKEAAYRLMVRQSGGMAQLMTMRYLPMLVEPRP
WTRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNA
LARTRWRLNTDVFDVAREAWRRGLEVGELPSQRDLPEPPPPPPGSPEEAL
AAVAEDDTLVLARRMHNKMLKRVRQHNRNLHSLRCDHKLKMELAEKFRDH
AFYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLK
IHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPLDGGGWWKGGEKPWQ
CLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGE
QVSRS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029262RPOL_N
IPR024075DNA-dir_RNA_pol_helix_hairp_sf
IPR002092DNA-dir_Rpol_phage-type
IPR037159RNA_POL_N_sf
IPR043502DNA/RNA_pol_sf