mRNA_P-wetherbeei_contig6158.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: A0A836CEF2_9STRA (DNA-directed RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEF2_9STRA) HSP 1 Score: 498 bits (1281), Expect = 9.120e-162 Identity = 274/564 (48.58%), Postives = 354/564 (62.77%), Query Frame = 1
Query: 58 YRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDAIADEQAKVWRQERGPDRPLYGPLMVLLQADKLALLTLHELVGHVLQTGNSGMPTVTACLAVADAIQMEVNLCRLQKTLGGEAVLAALQRSGRSQVRQVNNKAKRALDMLDVTDWPKSVKVKLGAMLLKLMMDTATL---------EDNGGCAFIHQMVNVTNKNRLPAKSQKGRIQMKEAAYRLMVRQSGGMAQLMTMRYLPMLVEPRPWTRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRGLEVGELPSQRDLPEPXXXXXXXXXXXXXXXXXXDTLV-----------------LARRMHNKMLKRVRQHNRNLHSLRCDHKLKMELAEKFRDHAFYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPL-DGGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVS 1668
YR++ E + G +R +QR+LL+W+ PLR AI +EQ +VW ERG +GPL+VLLQ +KLA++ +HE + LQ GN+G+P CL +A+A Q EVNL ++Q+ LG +A +A L+ S R VR+VN +AKRALDML+VTDWP ++KV+LGA+L+KL+ DTA + E AF H++ +L A + G + + AAY+ + Q +A LM RYLPMLV+P+PW R DRG Y+ LK +MR RGC+ QVDALR A LD+ V+ GLN L WR+N +V+ +A+EAW R L +GELP Q DLP P V +AR H + L Q N + HSLR D ++KM +AE+F YFPYN+DFRGRAYPVPPNLNHMG+DF RGVL F RPLG RG YWLK+ A+L+G+ K+SFDERAA+ D H + SAE PL DG WW + PWQCLA C EL AA G P T++SRLPVHQDG+CNGLQHYAALGRD AGGEQV+
Sbjct: 185 YRELAEGMVAGGRAGALRPLQRELLKWFIPLRAAIEEEQGRVWANERGAGMGAHGPLLVLLQPEKLAVMVMHETLNLTLQGGNAGVPAAGLCLRLAEAAQAEVNLLKMQRKLGSKAQVA-LRGSARRHVREVNIRAKRALDMLEVTDWPDALKVQLGAVLVKLLCDTAKVTPEATRGQPEPTPEAAFRHEI------RQLRANKKLGMLFLTPAAYKRV--QDWNLAGLMQPRYLPMLVKPKPWQRHDRGGYIMLKARIMRTRGCRSQVDALRVAKLDK-------VYHGLNCLGSVPWRVNDEVYAIAKEAWDRKLTIGELPPQEDLPVPPMPKTKMYKKGSSRKGKGGAEVDNTPPTPEEHARWRENEIARLAHARAL----QLNLDRHSLRSDLRIKMRIAERFAGRDMYFPYNLDFRGRAYPVPPNLNHMGNDFCRGVLTFARTRPLGARGLYWLKVQAASLFGEDKLSFDERAAYADAHMDAIRRSAEDPLGDGNDWWIRADSPWQCLATCKELI-AAIDSGDPKTFESRLPVHQDGTCNGLQHYAALGRDAAGGEQVN 727
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: A0A6H5JU39_9PHAE (DNA-directed RNA polymerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JU39_9PHAE) HSP 1 Score: 454 bits (1167), Expect = 5.590e-144 Identity = 264/610 (43.28%), Postives = 363/610 (59.51%), Query Frame = 1
Query: 1 LTEMQIAWELESQRKAMDSYRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDAIADEQAKVWRQERGPD------------RPLYGPLMVLLQADKLALLTLHELVGHVLQTGNSGMPTVTACLAVADAIQMEVNLCRLQKTLG--GEAVLAALQRSGRSQVRQVNNKAKRALDMLDVTDWPKSVKVKLGAMLLKLMMDTA-----------TLEDNGGC-----------------AFIHQMVNVTNKNRLPAKSQKGRIQMKEAAYRLMVRQSGGMAQLMTMRYLPMLVEPRPWTRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRGLEVGELPSQRDLPEPXXXXXXXXXXXXXXXXXX-----DTLVLARRM-----HNKMLKRVRQHNRNLHSLRCDHKLKMELAEKFRDHAFYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPLDGGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVSRS 1674
L +MQ+ E +S ++A + Y +M++ L G G M++++R L WY L+++I EQ VW + R YGP +V+L+ADK A+L +HE+V +L +GN G+ TV AC VA+ +Q EVNL R++K G G+ V + R VR+VN +A+ ALDML+ T WP +VKLGA L+KL+++TA T D GG AF+H ++ T K+ S++G + M + MV + +++L T R++PMLV P W +RG +L+L+ +MR +G Q ALR ADL + V++GLN L + RWR+N V D R + VG+LP DLP P D V R + ++L++ +Q N N+HSLRCD K+K+++A++FRDH YFPYN+DFRGR YP+PPNLN +GSDFSRGVLMFDEA+PLGE+G YWLK+H ANLYG+ K+SFD+R AFV+++ V DSA RPL+G WWKG + PWQCLAVC +L+ A +P PA Y SRLPVHQDGSCNGLQHYAALG D GG QV+ S
Sbjct: 285 LYQMQLEREDQSHQEACEKYGKMMKELMTMGKGTQMKSIERLLTTWYPALKESIEREQEAVWANLTDDNKGTVKTSGSFGGRGTYGPFLVMLKADKQAVLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNLMRMKKKDGKKGQPVKVSSLR----HVRKVNKQAQDALDMLEDTHWPIGAQVKLGAALIKLLIETACWTYDKESGVVTAWDKGGAERGGGERDTEGFPMPKAAFVHDII--TGKS-----SRRGTLTMAPEIFSKMVDED--ISRLATPRFVPMLVPPLDWVTPNRGGFLRLRAQIMRTKGEAAQKHALRRADLRR-------VYKGLNCLGKVRWRINGHVLDTVMVCLRDKIAVGDLPVIEDLPLPPRPDGVTVGRLGRLRAPVQGEDEDEGVFKERRQKHYAYKRLLEKTKQKNANMHSLRCDMKIKVDIAQEFRDHVIYFPYNMDFRGRTYPIPPNLNILGSDFSRGVLMFDEAKPLGEKGLYWLKVHLANLYGEDKVSFDDRVAFVEKNMDKVRDSALRPLEGECWWKGADSPWQCLAVCADLTAALDSPD-PARYLSRLPVHQDGSCNGLQHYAALGLDANGGAQVNLS 873
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: A0A4D9D3J6_9STRA (DNA-directed RNA polymerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3J6_9STRA) HSP 1 Score: 388 bits (996), Expect = 1.800e-119 Identity = 241/625 (38.56%), Postives = 346/625 (55.36%), Query Frame = 1
Query: 1 LTEMQIAWELESQRKAMDSYRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDAIADEQAKV----WRQERGPDRPLYGPLMVLLQADKLALLTLHELVGHVLQTGNSGMPTVTACLAVADAIQMEVNLCRLQKTLGGEAVLAALQRSGRSQVRQVNNKAKRALDMLDVTDWPKSVKVKLGAMLL---------------------------------------KLMMDTATLEDNGGC----AFIHQMVNVTNKN--RLPAKS----------QKGRIQMKEAAYRLMVRQSGGMAQLMTMRYLPMLVEPRPWTRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRGLEVGELPSQRD--LPEPXXXXXXXXXXXXXXXXXXDTLVLARRMHNKML--------KRVRQHNRNLHSLRCDHKLKMELAEKFRDHAFYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPLDGGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVS 1668
L ++++A+E + +A+ Y+++ ++L + G + V+RQ+ WY P+ +A+ AK+ W + G YGP ++L+ DKLA++T++E V +L+ GN G+P L +ADA++ EVN RL +T G + VL L+ +G +++VN KA+ AL+ D W +K+K+G MLL ++ + L+ GG A + N+ R PA S ++G + + EA YR M + + +T RY PM+V+PRPW D G YLQLK+ ++R + + Q DALR A + + V+ LN L R W +N +V +EA+ RGL VG+LPSQ D +P + V RR + L +RV++ N L SLRCD ++K+ +AE+FR+H FYFPYN+DFRGRAYPVPPNLNH+GSD RG+L F E RPLG+ G WLKIH ANL G+ K+SFD+R AFV+ +V DSA RPL+G GWW+ E+PWQ LAVC E+ AA G P ++ S +PVH DGSCNGLQHYAALGRDE G +QV+
Sbjct: 203 LRDLEVAFEEGTISEALGEYKEVQDTLFRTGKAAYLPVVKRQIFAWYGPMIEAMTALHAKLREGKW-SDLGNGVGTYGPFLILVPPDKLAVITVNETVNLILRHGNQGVPLTMLLLHIADAVRTEVNFLRLSETYG-DRVLNILRENGMISLKRVNRKAREALE--DGV-WRADLKIKVGGMLLSELHRVAKISPECVQDGAEEAHGLEGPEVGSVREKSREKRMRLQAPRLDQAGGGVEGGADSTDALTSANREAERPPALSIALESTRSIKKRGLVFLDEAVYRSMAG-AADVQHYLTPRYRPMVVQPRPWKSFDSGGYLQLKSFIVRSQNSKAQFDALRGARMPE-------VYHALNFLGRVPWVINGEVLSTIQEAYARGLTVGDLPSQLDELVPPLSGHPSHPPPADPALLGAEEDGVPGRRAEERRLLRDRWQIARRVKKRNAELFSLRCDTEIKLSIAEEFRNHTFYFPYNLDFRGRAYPVPPNLNHLGSDMCRGMLRFAEKRPLGKNGLRWLKIHLANLCGQDKLSFDDRVAFVEGKMENVQDSAARPLNGHGWWQKAEEPWQALAVCKEIV-AAVESGDPESFLSGVPVHMDGSCNGLQHYAALGRDEEGAKQVN 813
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: F0XZ85_AURAN (DNA-directed RNA polymerase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZ85_AURAN) HSP 1 Score: 374 bits (961), Expect = 3.660e-116 Identity = 226/577 (39.17%), Postives = 319/577 (55.29%), Query Frame = 1
Query: 1 LTEMQIAWELESQRKAMDSYRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDAIADEQAKVWRQERGPDRPLYGPLMVLLQADKLALLTLHELVGHVLQTGNSGMPTVTACLAVADAIQMEVNLCRLQKTLGGEAVLAALQRSGRSQVRQ---------------VNNKAKRALDMLDVTDWPKSVKVKLGAMLLKLMMDTATLEDNGGCAFIHQMVNVTNKNRLPAKSQKGRIQMKEAAYRLMVRQSGGMAQLMTMRYLPMLVEPRPWTRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRGLEVGELPSQRDL--PEPXXXXXXXXXXXXXXXXXXDTLVLARRMHNKMLKR---VRQHNRNLHSLRCDHKLKMELAEKFRDHA-FYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPLDGGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVS 1668
L E Q+ E E+ A Y M+E L G G ++ VQR + +WY PL I E+ ++G D +YGPL++LL ++LA+LT+H +G L+ G G + + +Q E + +L + L E + AA G+ V + VN++AKRAL+ D TDWP + KLG+ L+ ++D A +D+ G + + +N ++ K + + A +R++ R+LPMLVEPR W D G +L+L+ MR GC Q++A R A + V GL+A+ + W +N VFD+ + AW G + +LPSQ DL PEP +++++ L+R +++ N LHSLRCD LK+ +AE+F+D A FYFPYNVDFRGRAYPVPPNLNH+GSD R +L F EA+ LG+ G +WL+IH ANL+G K S D+RAAF H AD+ D+ ERP+DG WW ++PWQ LA C EL++AA P Y+ LPVH DGSCNGLQHYAALGRD GG QV+
Sbjct: 73 LYERQLELEEETLEAACADYEAMIEDLLSLGKGAELKPVQRLMAQWYEPLVTRITAERKATLDGDKGGDLRIYGPLLLLLPPEQLAVLTMHTTIGLCLKHGPLGAKYSNLVTTLGETVQAEARVLKL-RNLRRERLKAAEDAEGKRAVPKTFLDARALARLPTHVVNSRAKRALEEGDDTDWPTITRAKLGSALVMALLDVA--KDDAGSPLLEHTIVYSNARKIGIIRAKDEL-LSHARCPETIRRAA------MPRFLPMLVEPRRWRAYDEGGFLRLRAVAMRTHGCALQMEAFRNARGIEG-----GVLAGLDAMGKVPWAVNGPVFDLVKAAWASGGKWPDLPSQEDLALPEPMDLAEALARADGDEDG-------GKKLYDAHLRRSARLKRRNAELHSLRCDTLLKLSIAEQFKDEAAFYFPYNVDFRGRAYPVPPNLNHLGSDVCRAMLTFAEAKRLGDDGLFWLRIHLANLFGLSKKSLDDRAAFAVAHEADIRDAYERPMDGNMWWLEADEPWQALAACRELARAAEL-DDPRDYECALPVHADGSCNGLQHYAALGRDHEGGRQVN 626
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: A0A7S2HVK7_9STRA (DNA-directed RNA polymerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HVK7_9STRA) HSP 1 Score: 368 bits (945), Expect = 7.710e-114 Identity = 221/582 (37.97%), Postives = 322/582 (55.33%), Query Frame = 1
Query: 58 YRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDAIADEQAKVWRQERGPDRPLYGPLM--------------VLLQ--ADKLALLTLHELVGHVLQTGNSGMPTVTA----------CLAVADAIQMEVNLCRLQKTLGGEAVLAALQRSGRSQVRQVNNKAKRAL------------------DMLDVTDWPKSVKVKLGAMLLKLMMDTATLEDNGGCAFIHQMVNVTNKNRLPAKSQKGRIQMKEAAYR-LMVRQSGGMAQLMTMRYLPMLVEPRPWTRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRGLEVGELPSQRDLPEPXXXXXXXXXXXXXXXXXXDTLVLARRMHNKMLKRVRQHNRNLHSLRCDHKLKMELAEKFRDHAFYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPLDGGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVS 1668
Y +++ ++K G MR + + +W + I E+ R+E PDR +YGP+ V+ Q A KLA++TLH +V + +SGM +A C ++A+ ++ E NL L+K E L Q + + + +AL D+L+ +W +KVK+GA+L+K++++ A + +G AF H+ + +++ G + M + AY L + +AQ+ R LPM+V P+PW R D+G YL + T +MR G + DALR ADLDQ V GLNAL + WR+N +V DVAREAW + + + ELP + D+PE D L R+ H K++ ++N LHS RCD LK+ +A++ RD+ YFPYN+DFRGRAYP+PPNLNH+GSD RG+L F++ +PLGE+G +WLK+H ANLYG K +F++R F +H ++V DSA RPL+G WW E PWQ LAVC EL++A + P P ++S +PVH DGSCNGLQHYAALGRD GG V+
Sbjct: 55 YEELMSDMKKMGKLTHMRQAESVISKWLPQAAEMIDQEKEAFERKEAAPDRKVYGPIFCGLDSVTHRNGKKNVITQSGAFKLAVITLHTMVNSI----SSGMGAHSAADKGVGFRFLCKSIANGVESEYNLSLLRKK---EKELKKNQSEESKAEHKDSKQLNKALMSPGLTSADARRLRIRVRDVLEENEWGIDMKVKVGAILIKIVLE-ACKDRDGNPAFRHETIQAKYAHKV------GSVIMSDCAYEELCGTEHKPLAQI---RDLPMVVPPQPWLRWDKGGYLSVPTKIMRTHGYRAHSDALRVADLDQ-------VLAGLNALNKLPWRVNHEVLDVAREAWDQRMAIAELPERTDIPE-----------LEPLSEEEDADPLIRKRHYWQQKKIIRNNCELHSQRCDTILKLNIAQENRDYVIYFPYNLDFRGRAYPIPPNLNHLGSDLCRGLLKFEKKKPLGEKGLWWLKVHLANLYGFDKANFNDRMQFTMDHMSEVYDSAARPLEGNRWWTKAESPWQVLAVCKELTEALSHPN-PEAFESGMPVHMDGSCNGLQHYAALGRDVEGGASVN 600
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: A0A8J2SIS3_9STRA (DNA-directed RNA polymerase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SIS3_9STRA) HSP 1 Score: 361 bits (927), Expect = 2.430e-110 Identity = 222/583 (38.08%), Postives = 308/583 (52.83%), Query Frame = 1
Query: 13 QIAWELESQRKAMDSYRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDAIADEQAKVWRQERGPDRPLYGPLMVLLQADKLALLTLHELVGHVLQTGNSGMPTVTACLAVADAIQMEVNLCRLQKT--------------LGGEAVLAALQ-RSGRSQVRQ-----------VNNKAKRAL--DMLDVTDWPKSVKVKLGAMLLKLMMDTATLEDNGGCAFIHQMVNVTNKNRLPAKSQKGRIQMKEAAYRLMVRQSGGMAQLM---TMRYLPMLVEPRPWTRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRGLEVGELPSQRDLPEPXXXXXXXXXXXXXXXXXXDTLVLARRMHNKMLKRVRQHNRNLHSLRCDHKLKMELAEKFRDHAFYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPLDGGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVS 1668
QI E E KA Y MV+ L G G ++ VQ + WY PL D I +E+ + PD +YGPL++LL ++LA+LT+H ++GH L+ G G + A+ +AIQ+E + R+++ L E AL+ + GR + VN +AK+AL D D DWP + KLG +L+ +D A +++ G F H +V K ++ + A+ L+ R G L T R+LPMLVEPRPW +G +L+L+ MR GC D R A L V GL+A+ R W +N + D+ +EAW++G +LPS D A+ +H + ++R+ N LHSLRCD LK+++AE+FR+ AFYFPYNVDFRGRAYP+PPNLNH+GSD R VL F E + LG+ G YWL++H ANL+G K S +ER F + AD++DS P+ G WW E+PWQ LA EL +A+ P + LPVH DGSCNGLQHYAALGRD GG+QV+
Sbjct: 90 QIETEEECLEKASADYAAMVDELMALGKGAELKPVQALVASWYEPLVDVIVEERNNALAGAKSPDLKIYGPLLLLLPPEQLAVLTMHHVLGHCLKHGEPGAKYSSLVTALGEAIQVEARVLRVRQQRRRHLASRRGESDELANEEAKEALKAKLGRGRFLDAKALARLPQHVVNARAKKALEEDDADDADWPTMTRAKLGGVLVTRFLDVA-VDNEGNRLFEHDVVV----------KLKRKVGVVRASKELLQRARGDPIMLQWAATPRFLPMLVEPRPWRGFQKGGFLRLRAAAMRTHGC----DVQREAFLRANRGLADGVLAGLDAMGRVPWSINGPILDLVQEAWQQGGTWPDLPSLHDFEIREYEGDDPE---------------AKELHGRRNAKLRRKNAELHSLRCDTTLKLDIAERFRNDAFYFPYNVDFRGRAYPLPPNLNHLGSDVCRAVLQFAEPKRLGDDGLYWLRVHLANLFGLAKRSLEERHQFALDRHADILDSFTNPMRGKQWWLEAEEPWQALACICELGRASLLED-PRDHLCALPVHMDGSCNGLQHYAALGRDREGGKQVN 641
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: A0A7S1VRP7_9EUKA (DNA-directed RNA polymerase n=1 Tax=Sexangularia sp. CB-2014 TaxID=1486929 RepID=A0A7S1VRP7_9EUKA) HSP 1 Score: 343 bits (881), Expect = 5.480e-105 Identity = 219/584 (37.50%), Postives = 307/584 (52.57%), Query Frame = 1
Query: 91 GLGEGMRAVQRQLLRWYRPLRDAIADEQAKVWRQER-------------------GPDRPLYGPLMVLLQADKLALLTLHELVGHVLQTGNSGMPTVTACLAVADAIQMEVNLCRLQ---KTLGGEAVLA----ALQRSGRSQVRQVNNKAKR--------ALDMLDVT---------DWPKSVKVKLGAMLLKLMMDTATL------EDNGGC--------AFIHQMVNVTNKNRLPAKSQKGRIQMKEAAYRLMVRQSGGMAQLMTMRYLPMLVEPRPWTRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRGLEVGELPSQRDLPEPXXXXXXXXXXXXXXXXXXDTLVLARRMHNKMLKRVRQHNRNLHSLRCDHKLKMELAEKFRDHAFYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPLD-GGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVS 1668
GL ++ Q+ L+ WY+PL AI DEQ +V R R G DR +YGP ++L+ A KLA++T+HE +G L++G G+ +A + + A+ E +L LQ K GG ++ + AL++ R + + N A A D DV+ +WP ++ VK+G+ L+ ++DTA++ ED+G AF+H K ++ +++ +A ++L + M YLPM+V PRPW D G YL T VMR RG + Q AL ADL V+ L+ L T W +N VF+VA EAW+ G +GELP + D+P P D + RR + + N LHSLRCD K+++A++F FYFP+NVDFRGRAYPVPP+LNH+G+D RG+L F E PLGE G WLKIH ANL+G K++FDER A+V+ + ++A PLD G W + PWQ LA C EL+ A + P T+ SRLPVHQDG+CNGLQHYAALG D G V+
Sbjct: 8 GLAATLKPAQKILVTWYQPLVKAIKDEQREVLRVLRKEAREEGSETSGSSSKYDSGIDRHVYGPFLLLMSAQKLAVITMHEALGMALRSGTVGVTFTSAAVQIGKAVHTEAHLQVLQGGGKGSGGRSLKSVTPSALRKLRRRKAAVLRNDADAPAGTIAGTAGDAKDVSYELPDPSVAEWPTAMLVKVGSALIARLLDTASIHETIHVEDDGQFSTAGAQVPAFVHAYRVERGKRSGILRTHPSVLKLVDAGHKL--------RESMAAHYLPMVVPPRPWRDMDDGGYLATPTRVMRTRGSKLQARALAQADLTD-------VYAALDVLGGTPWTVNDRVFEVAMEAWKAGGGLGELPQRSDVPIPERLPHGGA----------DASLEERRRAAMDFRAALKRNAELHSLRCDTTYKLQVAKEFSGRTFYFPHNVDFRGRAYPVPPHLNHVGNDLCRGILTFAEGMPLGEDGLRWLKIHLANLFGHNKLTFDERIAWVESQLPAIREAARAPLDPSGSHWLDADDPWQALAACFELTDALSCTD-PTTFVSRLPVHQDGTCNGLQHYAALGGDIDGAVAVN 565
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: A0A7S3JVN8_9STRA (DNA-directed RNA polymerase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVN8_9STRA) HSP 1 Score: 347 bits (889), Expect = 6.070e-105 Identity = 218/561 (38.86%), Postives = 310/561 (55.26%), Query Frame = 1
Query: 43 KAMDSYRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDAIADEQAKVWRQERGPDRPLYGPLMVLLQADKLALLTLHELVGHVLQTGNSGMPTVTACLAVADAIQMEVNLCRLQ-------KTLGGEAVLAALQRSGRSQVRQVNNKAKRALDMLDVTDWPKSVKVKLGAMLLKLMMDTATLEDNGGCAFIHQMVNVTNKNRLPAKSQKGRIQMKEAA-YRLMVRQSGGMAQLMTMRYLPMLVEPRPWTRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRG-LEVGELPSQRDLPEPXXXXXXXXXXXXXXXXXXDTLVLARRMHN---------KMLKRVRQHNRNLHSLRCDHKLKMELAEKFRD-HAFYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPLDGGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVS 1668
KA Y++MV+ L + G G + VQ+ LL WY PL I E+ R DR +YGPL++LL+ ++ A++TLH ++ +Q G+ + I E+ L RL+ K L AL S S++ VN + ++ L D +WP+S KLG+ L+ +M AT + F H++ N T KN AK G + + + + + + M RYLPM++ PRPW +RG YL+L+ ++MR G Q+DA+R A + + +++GLNALA+ WR+N ++ ++ AW + E XXXXXXXXXXX D + +H + ++++R+ N HSLRCD +K+++A F+D AFYFPYN+DFRGRAYP+PPNLNH+GSD R +L F EA+PLG G YWL++H ANL+GK K S ER F + ++ SA+ P WW ++PWQ LA C E+S A P GP YKS LPVH DGSCNGLQHYAALGRD GG+QV+
Sbjct: 114 KACAEYKKMVQDLVRLGKGSELGPVQKALLSWYEPLTIRINQEKKDFINGIRSEDRSIYGPLLLLLKPEEFAVITLHNVLSSTMQASVHGVKYSALISTIGQEIMTEIRLNRLKQKEKENKKNKKYSFNLKALINSRSSKL--VNIRTRKILSESDGLEWPRSTLAKLGSFLINELMQVATCPNTNEALFKHKIEN-TFKNGKVAKL--GLVYISQPLLHESWIEEV--MHHCAMPRYLPMVIPPRPWEDINRGCYLKLRPDLMRTNGNIDQIDAIRRAQMPK-------IYDGLNALAKVPWRINKEMLEIIDTAWHQAQCRFPEXXXXXXXXXXXXXXXXXXXXXNLTKIVTDDEIDPDHIHKLKQHCTNYYRRIRKIRKINTEQHSLRCDLLIKLKIAHDFKDDQAFYFPYNLDFRGRAYPIPPNLNHLGSDVCRSMLTFAEAKPLGTNGLYWLRVHLANLFGKSKSSLQERVQFTINNQQNIFASAQEPFQTN-WWLEADEPWQALATCKEISAALNYPDGPENYKSSLPVHADGSCNGLQHYAALGRDHEGGKQVN 659
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: A0A482SYF4_9ARCH (DNA-directed RNA polymerase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SYF4_9ARCH) HSP 1 Score: 338 bits (868), Expect = 6.820e-105 Identity = 206/565 (36.46%), Postives = 327/565 (57.88%), Query Frame = 1
Query: 1 LTEMQIAWELESQRKAMDSYRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDAIADEQAKVWRQERGPDRPLYGPLMVLLQADKLALLTLHELVGHVLQTGNSGMPTVTACLAVADAIQMEVNLCRLQKTL-GGEAVLAALQR-----SGRSQVRQVNNKAKRALDMLDVTDWPKSVKVKLGAMLLKLMMDTATLEDNGGCAFI--HQMVNVTNKNRLPAKSQKGRIQMKEAAYRLMVRQSGGMAQLMTMRYLPMLVEPRPW-TRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRGLEVGELPSQRDLPEPXXXXXXXXXXXXXXXXXXDTLVLARRMHNKMLKRVRQHNRNLHSLRCDHKLKMELAEKFRDHAFYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPLDGGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVS 1668
L + Q A EL+ + +A ++++ +L++ G + V L WY PL A+ +E+ + ++ +G DR +YGP ++LL D++A++ L +VG +L++ S + VT + A++ E+NL RL+ +A + A+++ + + + +V ++ L+ D W ++K K+G L++ ++ T + NG F ++ + TNK + M AY+L+ ++ R+ PM+V P+PW ++A GAYL LK +M++ + QVD +R A++ V EGL+ L +T WR+N VFDV EA +G+++GE+PS +L EP D + + ++ +M +RV + N LHSLR D ++K+++AE+F++ +FP+N+DFRGRAYPVPPNL+HMGSD RG+L+F EA+ LGE G WLKIH ANL G K+ +D+R A++D H ++ +SA PL G WW E P+Q LA C+EL+ A P P +K LPVHQDGSCNGLQHYA LGRD GG+ V+
Sbjct: 99 LFKRQEAIELKIEEEAKYDRKELLVNLRRIGQSTSTQKVHHGLASWYEPLAQALKEEEEMIKKKIKGVDRQVYGPYLMLLPLDRVAIVALDVVVGQILRSDKS-VKIVTLLTEIGSALENELNLERLRAMKRNNKAAMFAMKKLEELANNKKETGRVYKNVRKVLN--DPEGWSPAIKTKIGGFLVETLVKTLHMP-NGEPVFTCKYEYNDRTNKKAAV-------LVMSPLAYQLV--DDSKNVGVIDPRWKPMVVPPKPWNSQAFYGAYLHLKAPLMKYSS-RFQVDVVRKANIKP-------VLEGLDYLGKTPWRVNQRVFDVVLEAESKGMQLGEIPSAVNLVEPKKEDYLPPGQE-------DPSKVNQILYGQMKRRVAKRNAELHSLRQDMRIKLDIAEEFKNDMIFFPHNLDFRGRAYPVPPNLSHMGSDMCRGLLVFAEAKELGETGLRWLKIHLANLCGYNKVPYDQRVAWIDAHMGNIRESALHPLSGEMWWSTTESPFQALAACIELANAYELPD-PTKHKCALPVHQDGSCNGLQHYAGLGRDALGGKAVN 634
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: D2VYC1_NAEGR (DNA-directed RNA polymerase n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VYC1_NAEGR) HSP 1 Score: 344 bits (882), Expect = 2.610e-104 Identity = 204/560 (36.43%), Postives = 311/560 (55.54%), Query Frame = 1
Query: 58 YRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDAIADEQAKV-------------WRQERGPDR---PLYGPLMVLLQADKLALLTLHELVGHVLQTGNSGMPTVTACLAVADAIQMEVNLCRLQKTLGGEAVLAALQRSGRSQVRQVNNKAKRALDMLDVTDWPKSVKVKLGAMLLKLMMDTATLE-----DNGGCAFIHQMVNVTNKNRLPAKSQKGRIQMKEAAYRLMVRQSGGMAQLMTMRYLPMLVEPRPWTRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRGLEVGELPSQRD--LPEPXXXXXXXXXXXXXXXXXXDTLVLARRMHNKMLKRVRQHNRNLHSLRCDHKLKMELAEKFRDHAFYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPLDGGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVS 1668
YR+ ++S R + ++ +L WY PL I ++Q +V D PLY + + A+KLA++TLHEL+ L+ G P + + DAIQ E+N+ +L++T + ++ ++Q+ N L + + + K V+LG+ L++L + TA + AFIH+ N+T +++ G ++ + L+ R+ +++ +LPMLV P PWT + G Y+ LK +MR RG Q L++A+L+ L GLN L TRWR+N V++ + W G +GELPS+ D LPE ++ + +++++ HNRNLHSLRCD LK+++AE F+D+ FYFP+N+DFRGRAYP+PP+LNH+G+D +RG+L F++ P+G+RG +WLKIH ANLYGK K+ FDER FVDE+ +++DSA++PL+G WW E PWQ LA C+EL++ +P P + S LP+ DGSCNGLQHYAALGRD G V+
Sbjct: 146 YRKDLKSATSRNQSACLPPAKKIMLEWYEPLTKIIREKQDEVNFSCSKKXXXXXXXXXXXSQDNFAIPLY---LTSISAEKLAIITLHELLASCLKE-RGGSPVSSISYQIGDAIQAEINVEKLKRTNYFKLII-------KNQMIYHNINKISKLKLNEYVTFTKEELVQLGSYLIQLALSTAHVPLISNPKETVPAFIHR--NITRNSKII-----GVVEPDDNLLHLIGREHVAQ-EILYPNHLPMLVPPNPWTSSTAGGYIALKVLIMRTRGSHLQAYTLKSAELNDLL-------SGLNTLNETRWRINPTVYETVLKVWNSGGGLGELPSRFDDTLPEEPETDDPE----------------IKKKWKRTVEKIKTHNRNLHSLRCDMLLKLKVAEDFKDNTFYFPHNIDFRGRAYPIPPHLNHLGADINRGLLTFEKGMPIGKRGIFWLKIHLANLYGKDKLPFDERVQFVDEYINEIIDSADQPLEGNRWWLKSENPWQTLAACVELAECLRSPN-PEEFLSHLPIQMDGSCNGLQHYAALGRDNLGALHVN 662 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6158.1.1 >prot_P-wetherbeei_contig6158.1.1 ID=prot_P-wetherbeei_contig6158.1.1|Name=mRNA_P-wetherbeei_contig6158.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=555bp MQIAWELESQRKAMDSYRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDAback to top mRNA from alignment at P-wetherbeei_contig6158:42..3420+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6158.1.1 ID=mRNA_P-wetherbeei_contig6158.1.1|Name=mRNA_P-wetherbeei_contig6158.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3379bp|location=Sequence derived from alignment at P-wetherbeei_contig6158:42..3420+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6158:42..3420+ >mRNA_P-wetherbeei_contig6158.1.1 ID=mRNA_P-wetherbeei_contig6158.1.1|Name=mRNA_P-wetherbeei_contig6158.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1665bp|location=Sequence derived from alignment at P-wetherbeei_contig6158:42..3420+ (Phaeothamnion wetherbeei SAG_119_79)back to top |