mRNA_P-wetherbeei_contig6158.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6158.1.1
Unique NamemRNA_P-wetherbeei_contig6158.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: A0A836CEF2_9STRA (DNA-directed RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEF2_9STRA)

HSP 1 Score: 498 bits (1281), Expect = 9.120e-162
Identity = 274/564 (48.58%), Postives = 354/564 (62.77%), Query Frame = 1
Query:   58 YRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDAIADEQAKVWRQERGPDRPLYGPLMVLLQADKLALLTLHELVGHVLQTGNSGMPTVTACLAVADAIQMEVNLCRLQKTLGGEAVLAALQRSGRSQVRQVNNKAKRALDMLDVTDWPKSVKVKLGAMLLKLMMDTATL---------EDNGGCAFIHQMVNVTNKNRLPAKSQKGRIQMKEAAYRLMVRQSGGMAQLMTMRYLPMLVEPRPWTRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRGLEVGELPSQRDLPEPXXXXXXXXXXXXXXXXXXDTLV-----------------LARRMHNKMLKRVRQHNRNLHSLRCDHKLKMELAEKFRDHAFYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPL-DGGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVS 1668
            YR++ E +   G    +R +QR+LL+W+ PLR AI +EQ +VW  ERG     +GPL+VLLQ +KLA++ +HE +   LQ GN+G+P    CL +A+A Q EVNL ++Q+ LG +A +A L+ S R  VR+VN +AKRALDML+VTDWP ++KV+LGA+L+KL+ DTA +         E     AF H++       +L A  + G + +  AAY+ +  Q   +A LM  RYLPMLV+P+PW R DRG Y+ LK  +MR RGC+ QVDALR A LD+       V+ GLN L    WR+N +V+ +A+EAW R L +GELP Q DLP P                     V                 +AR  H + L    Q N + HSLR D ++KM +AE+F     YFPYN+DFRGRAYPVPPNLNHMG+DF RGVL F   RPLG RG YWLK+  A+L+G+ K+SFDERAA+ D H   +  SAE PL DG  WW   + PWQCLA C EL  AA   G P T++SRLPVHQDG+CNGLQHYAALGRD AGGEQV+
Sbjct:  185 YRELAEGMVAGGRAGALRPLQRELLKWFIPLRAAIEEEQGRVWANERGAGMGAHGPLLVLLQPEKLAVMVMHETLNLTLQGGNAGVPAAGLCLRLAEAAQAEVNLLKMQRKLGSKAQVA-LRGSARRHVREVNIRAKRALDMLEVTDWPDALKVQLGAVLVKLLCDTAKVTPEATRGQPEPTPEAAFRHEI------RQLRANKKLGMLFLTPAAYKRV--QDWNLAGLMQPRYLPMLVKPKPWQRHDRGGYIMLKARIMRTRGCRSQVDALRVAKLDK-------VYHGLNCLGSVPWRVNDEVYAIAKEAWDRKLTIGELPPQEDLPVPPMPKTKMYKKGSSRKGKGGAEVDNTPPTPEEHARWRENEIARLAHARAL----QLNLDRHSLRSDLRIKMRIAERFAGRDMYFPYNLDFRGRAYPVPPNLNHMGNDFCRGVLTFARTRPLGARGLYWLKVQAASLFGEDKLSFDERAAYADAHMDAIRRSAEDPLGDGNDWWIRADSPWQCLATCKELI-AAIDSGDPKTFESRLPVHQDGTCNGLQHYAALGRDAAGGEQVN 727          
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: A0A6H5JU39_9PHAE (DNA-directed RNA polymerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JU39_9PHAE)

HSP 1 Score: 454 bits (1167), Expect = 5.590e-144
Identity = 264/610 (43.28%), Postives = 363/610 (59.51%), Query Frame = 1
Query:    1 LTEMQIAWELESQRKAMDSYRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDAIADEQAKVWRQERGPD------------RPLYGPLMVLLQADKLALLTLHELVGHVLQTGNSGMPTVTACLAVADAIQMEVNLCRLQKTLG--GEAVLAALQRSGRSQVRQVNNKAKRALDMLDVTDWPKSVKVKLGAMLLKLMMDTA-----------TLEDNGGC-----------------AFIHQMVNVTNKNRLPAKSQKGRIQMKEAAYRLMVRQSGGMAQLMTMRYLPMLVEPRPWTRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRGLEVGELPSQRDLPEPXXXXXXXXXXXXXXXXXX-----DTLVLARRM-----HNKMLKRVRQHNRNLHSLRCDHKLKMELAEKFRDHAFYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPLDGGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVSRS 1674
            L +MQ+  E +S ++A + Y +M++ L   G G  M++++R L  WY  L+++I  EQ  VW      +            R  YGP +V+L+ADK A+L +HE+V  +L +GN G+ TV AC  VA+ +Q EVNL R++K  G  G+ V  +  R     VR+VN +A+ ALDML+ T WP   +VKLGA L+KL+++TA           T  D GG                  AF+H ++  T K+     S++G + M    +  MV +   +++L T R++PMLV P  W   +RG +L+L+  +MR +G   Q  ALR ADL +       V++GLN L + RWR+N  V D      R  + VG+LP   DLP P                       D  V   R      + ++L++ +Q N N+HSLRCD K+K+++A++FRDH  YFPYN+DFRGR YP+PPNLN +GSDFSRGVLMFDEA+PLGE+G YWLK+H ANLYG+ K+SFD+R AFV+++   V DSA RPL+G  WWKG + PWQCLAVC +L+ A  +P  PA Y SRLPVHQDGSCNGLQHYAALG D  GG QV+ S
Sbjct:  285 LYQMQLEREDQSHQEACEKYGKMMKELMTMGKGTQMKSIERLLTTWYPALKESIEREQEAVWANLTDDNKGTVKTSGSFGGRGTYGPFLVMLKADKQAVLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNLMRMKKKDGKKGQPVKVSSLR----HVRKVNKQAQDALDMLEDTHWPIGAQVKLGAALIKLLIETACWTYDKESGVVTAWDKGGAERGGGERDTEGFPMPKAAFVHDII--TGKS-----SRRGTLTMAPEIFSKMVDED--ISRLATPRFVPMLVPPLDWVTPNRGGFLRLRAQIMRTKGEAAQKHALRRADLRR-------VYKGLNCLGKVRWRINGHVLDTVMVCLRDKIAVGDLPVIEDLPLPPRPDGVTVGRLGRLRAPVQGEDEDEGVFKERRQKHYAYKRLLEKTKQKNANMHSLRCDMKIKVDIAQEFRDHVIYFPYNMDFRGRTYPIPPNLNILGSDFSRGVLMFDEAKPLGEKGLYWLKVHLANLYGEDKVSFDDRVAFVEKNMDKVRDSALRPLEGECWWKGADSPWQCLAVCADLTAALDSPD-PARYLSRLPVHQDGSCNGLQHYAALGLDANGGAQVNLS 873          
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: A0A4D9D3J6_9STRA (DNA-directed RNA polymerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3J6_9STRA)

HSP 1 Score: 388 bits (996), Expect = 1.800e-119
Identity = 241/625 (38.56%), Postives = 346/625 (55.36%), Query Frame = 1
Query:    1 LTEMQIAWELESQRKAMDSYRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDAIADEQAKV----WRQERGPDRPLYGPLMVLLQADKLALLTLHELVGHVLQTGNSGMPTVTACLAVADAIQMEVNLCRLQKTLGGEAVLAALQRSGRSQVRQVNNKAKRALDMLDVTDWPKSVKVKLGAMLL---------------------------------------KLMMDTATLEDNGGC----AFIHQMVNVTNKN--RLPAKS----------QKGRIQMKEAAYRLMVRQSGGMAQLMTMRYLPMLVEPRPWTRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRGLEVGELPSQRD--LPEPXXXXXXXXXXXXXXXXXXDTLVLARRMHNKML--------KRVRQHNRNLHSLRCDHKLKMELAEKFRDHAFYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPLDGGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVS 1668
            L ++++A+E  +  +A+  Y+++ ++L + G    +  V+RQ+  WY P+ +A+    AK+    W  + G     YGP ++L+  DKLA++T++E V  +L+ GN G+P     L +ADA++ EVN  RL +T G + VL  L+ +G   +++VN KA+ AL+  D   W   +K+K+G MLL                                       ++ +    L+  GG     A     +   N+   R PA S          ++G + + EA YR M   +  +   +T RY PM+V+PRPW   D G YLQLK+ ++R +  + Q DALR A + +       V+  LN L R  W +N +V    +EA+ RGL VG+LPSQ D  +P                    +  V  RR   + L        +RV++ N  L SLRCD ++K+ +AE+FR+H FYFPYN+DFRGRAYPVPPNLNH+GSD  RG+L F E RPLG+ G  WLKIH ANL G+ K+SFD+R AFV+    +V DSA RPL+G GWW+  E+PWQ LAVC E+  AA   G P ++ S +PVH DGSCNGLQHYAALGRDE G +QV+
Sbjct:  203 LRDLEVAFEEGTISEALGEYKEVQDTLFRTGKAAYLPVVKRQIFAWYGPMIEAMTALHAKLREGKW-SDLGNGVGTYGPFLILVPPDKLAVITVNETVNLILRHGNQGVPLTMLLLHIADAVRTEVNFLRLSETYG-DRVLNILRENGMISLKRVNRKAREALE--DGV-WRADLKIKVGGMLLSELHRVAKISPECVQDGAEEAHGLEGPEVGSVREKSREKRMRLQAPRLDQAGGGVEGGADSTDALTSANREAERPPALSIALESTRSIKKRGLVFLDEAVYRSMAG-AADVQHYLTPRYRPMVVQPRPWKSFDSGGYLQLKSFIVRSQNSKAQFDALRGARMPE-------VYHALNFLGRVPWVINGEVLSTIQEAYARGLTVGDLPSQLDELVPPLSGHPSHPPPADPALLGAEEDGVPGRRAEERRLLRDRWQIARRVKKRNAELFSLRCDTEIKLSIAEEFRNHTFYFPYNLDFRGRAYPVPPNLNHLGSDMCRGMLRFAEKRPLGKNGLRWLKIHLANLCGQDKLSFDDRVAFVEGKMENVQDSAARPLNGHGWWQKAEEPWQALAVCKEIV-AAVESGDPESFLSGVPVHMDGSCNGLQHYAALGRDEEGAKQVN 813          
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: F0XZ85_AURAN (DNA-directed RNA polymerase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZ85_AURAN)

HSP 1 Score: 374 bits (961), Expect = 3.660e-116
Identity = 226/577 (39.17%), Postives = 319/577 (55.29%), Query Frame = 1
Query:    1 LTEMQIAWELESQRKAMDSYRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDAIADEQAKVWRQERGPDRPLYGPLMVLLQADKLALLTLHELVGHVLQTGNSGMPTVTACLAVADAIQMEVNLCRLQKTLGGEAVLAALQRSGRSQVRQ---------------VNNKAKRALDMLDVTDWPKSVKVKLGAMLLKLMMDTATLEDNGGCAFIHQMVNVTNKNRLPAKSQKGRIQMKEAAYRLMVRQSGGMAQLMTMRYLPMLVEPRPWTRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRGLEVGELPSQRDL--PEPXXXXXXXXXXXXXXXXXXDTLVLARRMHNKMLKR---VRQHNRNLHSLRCDHKLKMELAEKFRDHA-FYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPLDGGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVS 1668
            L E Q+  E E+   A   Y  M+E L   G G  ++ VQR + +WY PL   I  E+      ++G D  +YGPL++LL  ++LA+LT+H  +G  L+ G  G         + + +Q E  + +L + L  E + AA    G+  V +               VN++AKRAL+  D TDWP   + KLG+ L+  ++D A  +D+ G   +   +  +N  ++     K  + +  A     +R++         R+LPMLVEPR W   D G +L+L+   MR  GC  Q++A R A   +       V  GL+A+ +  W +N  VFD+ + AW  G +  +LPSQ DL  PEP                        +++++  L+R   +++ N  LHSLRCD  LK+ +AE+F+D A FYFPYNVDFRGRAYPVPPNLNH+GSD  R +L F EA+ LG+ G +WL+IH ANL+G  K S D+RAAF   H AD+ D+ ERP+DG  WW   ++PWQ LA C EL++AA     P  Y+  LPVH DGSCNGLQHYAALGRD  GG QV+
Sbjct:   73 LYERQLELEEETLEAACADYEAMIEDLLSLGKGAELKPVQRLMAQWYEPLVTRITAERKATLDGDKGGDLRIYGPLLLLLPPEQLAVLTMHTTIGLCLKHGPLGAKYSNLVTTLGETVQAEARVLKL-RNLRRERLKAAEDAEGKRAVPKTFLDARALARLPTHVVNSRAKRALEEGDDTDWPTITRAKLGSALVMALLDVA--KDDAGSPLLEHTIVYSNARKIGIIRAKDEL-LSHARCPETIRRAA------MPRFLPMLVEPRRWRAYDEGGFLRLRAVAMRTHGCALQMEAFRNARGIEG-----GVLAGLDAMGKVPWAVNGPVFDLVKAAWASGGKWPDLPSQEDLALPEPMDLAEALARADGDEDG-------GKKLYDAHLRRSARLKRRNAELHSLRCDTLLKLSIAEQFKDEAAFYFPYNVDFRGRAYPVPPNLNHLGSDVCRAMLTFAEAKRLGDDGLFWLRIHLANLFGLSKKSLDDRAAFAVAHEADIRDAYERPMDGNMWWLEADEPWQALAACRELARAAEL-DDPRDYECALPVHADGSCNGLQHYAALGRDHEGGRQVN 626          
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: A0A7S2HVK7_9STRA (DNA-directed RNA polymerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HVK7_9STRA)

HSP 1 Score: 368 bits (945), Expect = 7.710e-114
Identity = 221/582 (37.97%), Postives = 322/582 (55.33%), Query Frame = 1
Query:   58 YRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDAIADEQAKVWRQERGPDRPLYGPLM--------------VLLQ--ADKLALLTLHELVGHVLQTGNSGMPTVTA----------CLAVADAIQMEVNLCRLQKTLGGEAVLAALQRSGRSQVRQVNNKAKRAL------------------DMLDVTDWPKSVKVKLGAMLLKLMMDTATLEDNGGCAFIHQMVNVTNKNRLPAKSQKGRIQMKEAAYR-LMVRQSGGMAQLMTMRYLPMLVEPRPWTRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRGLEVGELPSQRDLPEPXXXXXXXXXXXXXXXXXXDTLVLARRMHNKMLKRVRQHNRNLHSLRCDHKLKMELAEKFRDHAFYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPLDGGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVS 1668
            Y +++  ++K G    MR  +  + +W     + I  E+    R+E  PDR +YGP+               V+ Q  A KLA++TLH +V  +    +SGM   +A          C ++A+ ++ E NL  L+K    E  L   Q        + + +  +AL                  D+L+  +W   +KVK+GA+L+K++++ A  + +G  AF H+ +     +++      G + M + AY  L   +   +AQ+   R LPM+V P+PW R D+G YL + T +MR  G +   DALR ADLDQ       V  GLNAL +  WR+N +V DVAREAW + + + ELP + D+PE                   D   L R+ H    K++ ++N  LHS RCD  LK+ +A++ RD+  YFPYN+DFRGRAYP+PPNLNH+GSD  RG+L F++ +PLGE+G +WLK+H ANLYG  K +F++R  F  +H ++V DSA RPL+G  WW   E PWQ LAVC EL++A + P  P  ++S +PVH DGSCNGLQHYAALGRD  GG  V+
Sbjct:   55 YEELMSDMKKMGKLTHMRQAESVISKWLPQAAEMIDQEKEAFERKEAAPDRKVYGPIFCGLDSVTHRNGKKNVITQSGAFKLAVITLHTMVNSI----SSGMGAHSAADKGVGFRFLCKSIANGVESEYNLSLLRKK---EKELKKNQSEESKAEHKDSKQLNKALMSPGLTSADARRLRIRVRDVLEENEWGIDMKVKVGAILIKIVLE-ACKDRDGNPAFRHETIQAKYAHKV------GSVIMSDCAYEELCGTEHKPLAQI---RDLPMVVPPQPWLRWDKGGYLSVPTKIMRTHGYRAHSDALRVADLDQ-------VLAGLNALNKLPWRVNHEVLDVAREAWDQRMAIAELPERTDIPE-----------LEPLSEEEDADPLIRKRHYWQQKKIIRNNCELHSQRCDTILKLNIAQENRDYVIYFPYNLDFRGRAYPIPPNLNHLGSDLCRGLLKFEKKKPLGEKGLWWLKVHLANLYGFDKANFNDRMQFTMDHMSEVYDSAARPLEGNRWWTKAESPWQVLAVCKELTEALSHPN-PEAFESGMPVHMDGSCNGLQHYAALGRDVEGGASVN 600          
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: A0A8J2SIS3_9STRA (DNA-directed RNA polymerase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SIS3_9STRA)

HSP 1 Score: 361 bits (927), Expect = 2.430e-110
Identity = 222/583 (38.08%), Postives = 308/583 (52.83%), Query Frame = 1
Query:   13 QIAWELESQRKAMDSYRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDAIADEQAKVWRQERGPDRPLYGPLMVLLQADKLALLTLHELVGHVLQTGNSGMPTVTACLAVADAIQMEVNLCRLQKT--------------LGGEAVLAALQ-RSGRSQVRQ-----------VNNKAKRAL--DMLDVTDWPKSVKVKLGAMLLKLMMDTATLEDNGGCAFIHQMVNVTNKNRLPAKSQKGRIQMKEAAYRLMVRQSGGMAQLM---TMRYLPMLVEPRPWTRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRGLEVGELPSQRDLPEPXXXXXXXXXXXXXXXXXXDTLVLARRMHNKMLKRVRQHNRNLHSLRCDHKLKMELAEKFRDHAFYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPLDGGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVS 1668
            QI  E E   KA   Y  MV+ L   G G  ++ VQ  +  WY PL D I +E+       + PD  +YGPL++LL  ++LA+LT+H ++GH L+ G  G    +   A+ +AIQ+E  + R+++               L  E    AL+ + GR +              VN +AK+AL  D  D  DWP   + KLG +L+   +D A +++ G   F H +V             K ++ +  A+  L+ R  G    L    T R+LPMLVEPRPW    +G +L+L+   MR  GC    D  R A L         V  GL+A+ R  W +N  + D+ +EAW++G    +LPS  D                           A+ +H +   ++R+ N  LHSLRCD  LK+++AE+FR+ AFYFPYNVDFRGRAYP+PPNLNH+GSD  R VL F E + LG+ G YWL++H ANL+G  K S +ER  F  +  AD++DS   P+ G  WW   E+PWQ LA   EL +A+     P  +   LPVH DGSCNGLQHYAALGRD  GG+QV+
Sbjct:   90 QIETEEECLEKASADYAAMVDELMALGKGAELKPVQALVASWYEPLVDVIVEERNNALAGAKSPDLKIYGPLLLLLPPEQLAVLTMHHVLGHCLKHGEPGAKYSSLVTALGEAIQVEARVLRVRQQRRRHLASRRGESDELANEEAKEALKAKLGRGRFLDAKALARLPQHVVNARAKKALEEDDADDADWPTMTRAKLGGVLVTRFLDVA-VDNEGNRLFEHDVVV----------KLKRKVGVVRASKELLQRARGDPIMLQWAATPRFLPMLVEPRPWRGFQKGGFLRLRAAAMRTHGC----DVQREAFLRANRGLADGVLAGLDAMGRVPWSINGPILDLVQEAWQQGGTWPDLPSLHDFEIREYEGDDPE---------------AKELHGRRNAKLRRKNAELHSLRCDTTLKLDIAERFRNDAFYFPYNVDFRGRAYPLPPNLNHLGSDVCRAVLQFAEPKRLGDDGLYWLRVHLANLFGLAKRSLEERHQFALDRHADILDSFTNPMRGKQWWLEAEEPWQALACICELGRASLLED-PRDHLCALPVHMDGSCNGLQHYAALGRDREGGKQVN 641          
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: A0A7S1VRP7_9EUKA (DNA-directed RNA polymerase n=1 Tax=Sexangularia sp. CB-2014 TaxID=1486929 RepID=A0A7S1VRP7_9EUKA)

HSP 1 Score: 343 bits (881), Expect = 5.480e-105
Identity = 219/584 (37.50%), Postives = 307/584 (52.57%), Query Frame = 1
Query:   91 GLGEGMRAVQRQLLRWYRPLRDAIADEQAKVWRQER-------------------GPDRPLYGPLMVLLQADKLALLTLHELVGHVLQTGNSGMPTVTACLAVADAIQMEVNLCRLQ---KTLGGEAVLA----ALQRSGRSQVRQVNNKAKR--------ALDMLDVT---------DWPKSVKVKLGAMLLKLMMDTATL------EDNGGC--------AFIHQMVNVTNKNRLPAKSQKGRIQMKEAAYRLMVRQSGGMAQLMTMRYLPMLVEPRPWTRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRGLEVGELPSQRDLPEPXXXXXXXXXXXXXXXXXXDTLVLARRMHNKMLKRVRQHNRNLHSLRCDHKLKMELAEKFRDHAFYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPLD-GGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVS 1668
            GL   ++  Q+ L+ WY+PL  AI DEQ +V R  R                   G DR +YGP ++L+ A KLA++T+HE +G  L++G  G+   +A + +  A+  E +L  LQ   K  GG ++ +    AL++  R +   + N A          A D  DV+         +WP ++ VK+G+ L+  ++DTA++      ED+G          AF+H       K     ++    +++ +A ++L         + M   YLPM+V PRPW   D G YL   T VMR RG + Q  AL  ADL         V+  L+ L  T W +N  VF+VA EAW+ G  +GELP + D+P P                  D  +  RR      +   + N  LHSLRCD   K+++A++F    FYFP+NVDFRGRAYPVPP+LNH+G+D  RG+L F E  PLGE G  WLKIH ANL+G  K++FDER A+V+     + ++A  PLD  G  W   + PWQ LA C EL+ A +    P T+ SRLPVHQDG+CNGLQHYAALG D  G   V+
Sbjct:    8 GLAATLKPAQKILVTWYQPLVKAIKDEQREVLRVLRKEAREEGSETSGSSSKYDSGIDRHVYGPFLLLMSAQKLAVITMHEALGMALRSGTVGVTFTSAAVQIGKAVHTEAHLQVLQGGGKGSGGRSLKSVTPSALRKLRRRKAAVLRNDADAPAGTIAGTAGDAKDVSYELPDPSVAEWPTAMLVKVGSALIARLLDTASIHETIHVEDDGQFSTAGAQVPAFVHAYRVERGKRSGILRTHPSVLKLVDAGHKL--------RESMAAHYLPMVVPPRPWRDMDDGGYLATPTRVMRTRGSKLQARALAQADLTD-------VYAALDVLGGTPWTVNDRVFEVAMEAWKAGGGLGELPQRSDVPIPERLPHGGA----------DASLEERRRAAMDFRAALKRNAELHSLRCDTTYKLQVAKEFSGRTFYFPHNVDFRGRAYPVPPHLNHVGNDLCRGILTFAEGMPLGEDGLRWLKIHLANLFGHNKLTFDERIAWVESQLPAIREAARAPLDPSGSHWLDADDPWQALAACFELTDALSCTD-PTTFVSRLPVHQDGTCNGLQHYAALGGDIDGAVAVN 565          
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: A0A7S3JVN8_9STRA (DNA-directed RNA polymerase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVN8_9STRA)

HSP 1 Score: 347 bits (889), Expect = 6.070e-105
Identity = 218/561 (38.86%), Postives = 310/561 (55.26%), Query Frame = 1
Query:   43 KAMDSYRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDAIADEQAKVWRQERGPDRPLYGPLMVLLQADKLALLTLHELVGHVLQTGNSGMPTVTACLAVADAIQMEVNLCRLQ-------KTLGGEAVLAALQRSGRSQVRQVNNKAKRALDMLDVTDWPKSVKVKLGAMLLKLMMDTATLEDNGGCAFIHQMVNVTNKNRLPAKSQKGRIQMKEAA-YRLMVRQSGGMAQLMTMRYLPMLVEPRPWTRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRG-LEVGELPSQRDLPEPXXXXXXXXXXXXXXXXXXDTLVLARRMHN---------KMLKRVRQHNRNLHSLRCDHKLKMELAEKFRD-HAFYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPLDGGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVS 1668
            KA   Y++MV+ L + G G  +  VQ+ LL WY PL   I  E+       R  DR +YGPL++LL+ ++ A++TLH ++   +Q    G+        +   I  E+ L RL+       K       L AL  S  S++  VN + ++ L   D  +WP+S   KLG+ L+  +M  AT  +     F H++ N T KN   AK   G + + +   +   + +   M      RYLPM++ PRPW   +RG YL+L+ ++MR  G   Q+DA+R A + +       +++GLNALA+  WR+N ++ ++   AW +      E          XXXXXXXXXXX       D  +    +H          + ++++R+ N   HSLRCD  +K+++A  F+D  AFYFPYN+DFRGRAYP+PPNLNH+GSD  R +L F EA+PLG  G YWL++H ANL+GK K S  ER  F   +  ++  SA+ P     WW   ++PWQ LA C E+S A   P GP  YKS LPVH DGSCNGLQHYAALGRD  GG+QV+
Sbjct:  114 KACAEYKKMVQDLVRLGKGSELGPVQKALLSWYEPLTIRINQEKKDFINGIRSEDRSIYGPLLLLLKPEEFAVITLHNVLSSTMQASVHGVKYSALISTIGQEIMTEIRLNRLKQKEKENKKNKKYSFNLKALINSRSSKL--VNIRTRKILSESDGLEWPRSTLAKLGSFLINELMQVATCPNTNEALFKHKIEN-TFKNGKVAKL--GLVYISQPLLHESWIEEV--MHHCAMPRYLPMVIPPRPWEDINRGCYLKLRPDLMRTNGNIDQIDAIRRAQMPK-------IYDGLNALAKVPWRINKEMLEIIDTAWHQAQCRFPEXXXXXXXXXXXXXXXXXXXXXNLTKIVTDDEIDPDHIHKLKQHCTNYYRRIRKIRKINTEQHSLRCDLLIKLKIAHDFKDDQAFYFPYNLDFRGRAYPIPPNLNHLGSDVCRSMLTFAEAKPLGTNGLYWLRVHLANLFGKSKSSLQERVQFTINNQQNIFASAQEPFQTN-WWLEADEPWQALATCKEISAALNYPDGPENYKSSLPVHADGSCNGLQHYAALGRDHEGGKQVN 659          
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: A0A482SYF4_9ARCH (DNA-directed RNA polymerase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SYF4_9ARCH)

HSP 1 Score: 338 bits (868), Expect = 6.820e-105
Identity = 206/565 (36.46%), Postives = 327/565 (57.88%), Query Frame = 1
Query:    1 LTEMQIAWELESQRKAMDSYRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDAIADEQAKVWRQERGPDRPLYGPLMVLLQADKLALLTLHELVGHVLQTGNSGMPTVTACLAVADAIQMEVNLCRLQKTL-GGEAVLAALQR-----SGRSQVRQVNNKAKRALDMLDVTDWPKSVKVKLGAMLLKLMMDTATLEDNGGCAFI--HQMVNVTNKNRLPAKSQKGRIQMKEAAYRLMVRQSGGMAQLMTMRYLPMLVEPRPW-TRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRGLEVGELPSQRDLPEPXXXXXXXXXXXXXXXXXXDTLVLARRMHNKMLKRVRQHNRNLHSLRCDHKLKMELAEKFRDHAFYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPLDGGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVS 1668
            L + Q A EL+ + +A    ++++ +L++ G     + V   L  WY PL  A+ +E+  + ++ +G DR +YGP ++LL  D++A++ L  +VG +L++  S +  VT    +  A++ E+NL RL+      +A + A+++     + + +  +V    ++ L+  D   W  ++K K+G  L++ ++ T  +  NG   F   ++  + TNK           + M   AY+L+         ++  R+ PM+V P+PW ++A  GAYL LK  +M++   + QVD +R A++         V EGL+ L +T WR+N  VFDV  EA  +G+++GE+PS  +L EP                  D   + + ++ +M +RV + N  LHSLR D ++K+++AE+F++   +FP+N+DFRGRAYPVPPNL+HMGSD  RG+L+F EA+ LGE G  WLKIH ANL G  K+ +D+R A++D H  ++ +SA  PL G  WW   E P+Q LA C+EL+ A   P  P  +K  LPVHQDGSCNGLQHYA LGRD  GG+ V+
Sbjct:   99 LFKRQEAIELKIEEEAKYDRKELLVNLRRIGQSTSTQKVHHGLASWYEPLAQALKEEEEMIKKKIKGVDRQVYGPYLMLLPLDRVAIVALDVVVGQILRSDKS-VKIVTLLTEIGSALENELNLERLRAMKRNNKAAMFAMKKLEELANNKKETGRVYKNVRKVLN--DPEGWSPAIKTKIGGFLVETLVKTLHMP-NGEPVFTCKYEYNDRTNKKAAV-------LVMSPLAYQLV--DDSKNVGVIDPRWKPMVVPPKPWNSQAFYGAYLHLKAPLMKYSS-RFQVDVVRKANIKP-------VLEGLDYLGKTPWRVNQRVFDVVLEAESKGMQLGEIPSAVNLVEPKKEDYLPPGQE-------DPSKVNQILYGQMKRRVAKRNAELHSLRQDMRIKLDIAEEFKNDMIFFPHNLDFRGRAYPVPPNLSHMGSDMCRGLLVFAEAKELGETGLRWLKIHLANLCGYNKVPYDQRVAWIDAHMGNIRESALHPLSGEMWWSTTESPFQALAACIELANAYELPD-PTKHKCALPVHQDGSCNGLQHYAGLGRDALGGKAVN 634          
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Match: D2VYC1_NAEGR (DNA-directed RNA polymerase n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VYC1_NAEGR)

HSP 1 Score: 344 bits (882), Expect = 2.610e-104
Identity = 204/560 (36.43%), Postives = 311/560 (55.54%), Query Frame = 1
Query:   58 YRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDAIADEQAKV-------------WRQERGPDR---PLYGPLMVLLQADKLALLTLHELVGHVLQTGNSGMPTVTACLAVADAIQMEVNLCRLQKTLGGEAVLAALQRSGRSQVRQVNNKAKRALDMLDVTDWPKSVKVKLGAMLLKLMMDTATLE-----DNGGCAFIHQMVNVTNKNRLPAKSQKGRIQMKEAAYRLMVRQSGGMAQLMTMRYLPMLVEPRPWTRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNALARTRWRLNTDVFDVAREAWRRGLEVGELPSQRD--LPEPXXXXXXXXXXXXXXXXXXDTLVLARRMHNKMLKRVRQHNRNLHSLRCDHKLKMELAEKFRDHAFYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLKIHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPLDGGGWWKGGEKPWQCLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGEQVS 1668
            YR+ ++S   R     +   ++ +L WY PL   I ++Q +V                    D    PLY   +  + A+KLA++TLHEL+   L+    G P  +    + DAIQ E+N+ +L++T   + ++       ++Q+   N      L + +   + K   V+LG+ L++L + TA +           AFIH+  N+T  +++      G ++  +    L+ R+     +++   +LPMLV P PWT +  G Y+ LK  +MR RG   Q   L++A+L+  L        GLN L  TRWR+N  V++   + W  G  +GELPS+ D  LPE                         ++   + +++++ HNRNLHSLRCD  LK+++AE F+D+ FYFP+N+DFRGRAYP+PP+LNH+G+D +RG+L F++  P+G+RG +WLKIH ANLYGK K+ FDER  FVDE+  +++DSA++PL+G  WW   E PWQ LA C+EL++   +P  P  + S LP+  DGSCNGLQHYAALGRD  G   V+
Sbjct:  146 YRKDLKSATSRNQSACLPPAKKIMLEWYEPLTKIIREKQDEVNFSCSKKXXXXXXXXXXXSQDNFAIPLY---LTSISAEKLAIITLHELLASCLKE-RGGSPVSSISYQIGDAIQAEINVEKLKRTNYFKLII-------KNQMIYHNINKISKLKLNEYVTFTKEELVQLGSYLIQLALSTAHVPLISNPKETVPAFIHR--NITRNSKII-----GVVEPDDNLLHLIGREHVAQ-EILYPNHLPMLVPPNPWTSSTAGGYIALKVLIMRTRGSHLQAYTLKSAELNDLL-------SGLNTLNETRWRINPTVYETVLKVWNSGGGLGELPSRFDDTLPEEPETDDPE----------------IKKKWKRTVEKIKTHNRNLHSLRCDMLLKLKVAEDFKDNTFYFPHNIDFRGRAYPIPPHLNHLGADINRGLLTFEKGMPIGKRGIFWLKIHLANLYGKDKLPFDERVQFVDEYINEIIDSADQPLEGNRWWLKSENPWQTLAACVELAECLRSPN-PEEFLSHLPIQMDGSCNGLQHYAALGRDNLGALHVN 662          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6158.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CEF2_9STRA9.120e-16248.58DNA-directed RNA polymerase n=1 Tax=Tribonema minu... [more]
A0A6H5JU39_9PHAE5.590e-14443.28DNA-directed RNA polymerase n=2 Tax=Ectocarpus Tax... [more]
A0A4D9D3J6_9STRA1.800e-11938.56DNA-directed RNA polymerase n=2 Tax=Monodopsidacea... [more]
F0XZ85_AURAN3.660e-11639.17DNA-directed RNA polymerase n=1 Tax=Aureococcus an... [more]
A0A7S2HVK7_9STRA7.710e-11437.97DNA-directed RNA polymerase n=1 Tax=Dictyocha spec... [more]
A0A8J2SIS3_9STRA2.430e-11038.08DNA-directed RNA polymerase n=1 Tax=Pelagomonas ca... [more]
A0A7S1VRP7_9EUKA5.480e-10537.50DNA-directed RNA polymerase n=1 Tax=Sexangularia s... [more]
A0A7S3JVN8_9STRA6.070e-10538.86DNA-directed RNA polymerase n=1 Tax=Aureoumbra lag... [more]
A0A482SYF4_9ARCH6.820e-10536.46DNA-directed RNA polymerase n=1 Tax=archaeon TaxID... [more]
D2VYC1_NAEGR2.610e-10436.43DNA-directed RNA polymerase n=1 Tax=Naegleria grub... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6158contigP-wetherbeei_contig6158:42..3420 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FQU5
Preferred nameRpoT
PFAMsRNA_pol,RPOL_N
Model size1674
Max annot lvl2759|Eukaryota
KEGG koko:K00960,ko:K10908,ko:K11446
Hectar predicted targeting categoryother localisation
GOsGO:0000428,GO:0000959,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006139,GO:0006351,GO:0006390,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009507,GO:0009536,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034245,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0098798,GO:0140053,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234
Exons7
Evalue5.33e-142
EggNOG OGsCOG5108@1|root,KOG1038@2759|Eukaryota
EC2.7.7.6
DescriptionDNA-directed 5'-3' RNA polymerase activity
Cds size1665
COG categoryK
BRITEko00000,ko01000,ko01009,ko03029,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6158.1.1prot_P-wetherbeei_contig6158.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6158 51..3420 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186892.973389-UTR-P-wetherbeei_contig6158:41..501683186892.973389-UTR-P-wetherbeei_contig6158:41..50Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6158 42..50 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186892.9827995-CDS-P-wetherbeei_contig6158:50..4041683186892.9827995-CDS-P-wetherbeei_contig6158:50..404Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6158 51..404 +
1683186892.9905639-CDS-P-wetherbeei_contig6158:599..7521683186892.9905639-CDS-P-wetherbeei_contig6158:599..752Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6158 600..752 +
1683186892.9987812-CDS-P-wetherbeei_contig6158:995..11271683186892.9987812-CDS-P-wetherbeei_contig6158:995..1127Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6158 996..1127 +
1683186893.006616-CDS-P-wetherbeei_contig6158:1427..16461683186893.006616-CDS-P-wetherbeei_contig6158:1427..1646Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6158 1428..1646 +
1683186893.01454-CDS-P-wetherbeei_contig6158:1911..21001683186893.01454-CDS-P-wetherbeei_contig6158:1911..2100Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6158 1912..2100 +
1683186893.0222878-CDS-P-wetherbeei_contig6158:2490..28261683186893.0222878-CDS-P-wetherbeei_contig6158:2490..2826Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6158 2491..2826 +
1683186893.030038-CDS-P-wetherbeei_contig6158:3138..34201683186893.030038-CDS-P-wetherbeei_contig6158:3138..3420Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6158 3139..3420 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6158.1.1

>prot_P-wetherbeei_contig6158.1.1 ID=prot_P-wetherbeei_contig6158.1.1|Name=mRNA_P-wetherbeei_contig6158.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=555bp
MQIAWELESQRKAMDSYRQMVESLQKRGLGEGMRAVQRQLLRWYRPLRDA
IADEQAKVWRQERGPDRPLYGPLMVLLQADKLALLTLHELVGHVLQTGNS
GMPTVTACLAVADAIQMEVNLCRLQKTLGGEAVLAALQRSGRSQVRQVNN
KAKRALDMLDVTDWPKSVKVKLGAMLLKLMMDTATLEDNGGCAFIHQMVN
VTNKNRLPAKSQKGRIQMKEAAYRLMVRQSGGMAQLMTMRYLPMLVEPRP
WTRADRGAYLQLKTNVMRHRGCQGQVDALRTADLDQQLFSKFQVFEGLNA
LARTRWRLNTDVFDVAREAWRRGLEVGELPSQRDLPEPPPPPPGSPEEAL
AAVAEDDTLVLARRMHNKMLKRVRQHNRNLHSLRCDHKLKMELAEKFRDH
AFYFPYNVDFRGRAYPVPPNLNHMGSDFSRGVLMFDEARPLGERGFYWLK
IHCANLYGKGKMSFDERAAFVDEHFADVVDSAERPLDGGGWWKGGEKPWQ
CLAVCMELSQAAAAPGGPATYKSRLPVHQDGSCNGLQHYAALGRDEAGGE
QVSRS
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mRNA from alignment at P-wetherbeei_contig6158:42..3420+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6158.1.1 ID=mRNA_P-wetherbeei_contig6158.1.1|Name=mRNA_P-wetherbeei_contig6158.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3379bp|location=Sequence derived from alignment at P-wetherbeei_contig6158:42..3420+ (Phaeothamnion wetherbeei SAG_119_79)
CTGACGGAGATGCAAATCGCCTGGGAGCTGGAGAGCCAGCGGAAGGCGAT GGACTCGTACCGGCAGATGGTCGAGTCGCTGCAGAAGCGCGGCCTCGGCG AAGGCATGCGCGCCGTGCAGCGGCAGCTGCTGCGCTGGTACCGGCCGCTG CGGGACGCCATCGCCGATGAGCAGGCGAAGGTCTGGCGGCAGGAACGCGG CCCTGACAGGCCGCTTTACGGCCCACTCATGGTGCTGCTGCAGGCCGACA AGCTGGCGTTGCTGACACTGCACGAGCTGGTGGGGCACGTGCTGCAGACG GGAAACAGTGGCATGCCCACCGTCACGGCGTGCCTTGCCGTCGCCGACGC CATCCAGATGGAGGTGAGAGAGTCTTCCTTACTCCTCGACATCTAAACAT CGCTTCGTCACTTTTCCGGTGTTTCCATGTTTCCCTGTTTCATCTTCTTC CGTGTCCCAACTCCTTAGCCGACATCGTTGTTTTGAACTCTTTTTGTTGT CGTGGGTAGGAGCATGACCGTGTTTTTGACTTTGCTGCTACCCTTTTTGT TGTTGCAGGTGAACCTGTGCCGGCTGCAAAAGACGCTGGGCGGGGAGGCG GTGCTGGCGGCGCTGCAGCGGTCGGGGCGGTCGCAAGTGCGGCAGGTCAA CAACAAGGCCAAGCGTGCGCTCGACATGCTTGACGTCACCGATTGGCCCA AGTCCGTCAAGGTCAGCAAATTGTTCGAAAAACATTGATTTATGTCGGCG CCGCAACGAGATTTGCGGATAATAGTGGTCAAGCGGTGATCTTATTCCTT TTGGTACTAGGTGGCAGGTATCCCCCGGTTATTACTCTATCGACATTTTC TGTGTATTTTCCTTTCCTCTGCCCGGCCCGTCGGTTATCTTTGTTATCTG ACACCGCTTTTTGCCTGCGGCGCTTGCGGCTGCCCTCACGCCGGCCGGCA ACAGGTGAAGCTGGGGGCGATGCTGCTGAAGCTGATGATGGATACAGCGA CGCTTGAAGACAACGGCGGGTGCGCCTTCATCCACCAAATGGTCAACGTC ACCAATAAGAACCGCCTGCCCGCCAAAAGTCAGAAGGTCCAGGTGAGTAA AGACCTACAGCCGTTCTCTTTCGCCGCTTTCTAGAAGCCTTCTGGCGGGA AAAGTGGACGCCAGCCTTCTGCCGCGGAGGGGCATTGTCTTGTCGATACA TGTGGCGTACTGCCTGCCCGTAGCTGCATGCCGCCGCTACATTCCTCAAA TTCCTTCGGAATGCCGAACCTACGCGTCAACCTGCCCTATCCCTTCTCAC AATTCTCTCGCTTTCTATTTTCTATCACTGGATTCTTCGTGCACGTCCTT CTTCTCTTCTGCTGGTGATCTCCTCTTTCGTGGCAGGGGCGCATCCAGAT GAAGGAGGCCGCGTACCGGCTGATGGTGCGCCAGTCGGGCGGCATGGCGC AGCTCATGACCATGCGCTACTTGCCCATGCTGGTAGAGCCGCGGCCGTGG ACGCGGGCCGACCGCGGCGCGTACCTGCAGCTGAAGACGAACGTGATGCG GCACCGCGGCTGCCAGGGCCAGGTGGACGCCCTCCGGACTGCTGACCTCG ACCAGGTCAGTCAGCCCAGCCTACGCTGCAGCGAGAGAGATGAGAAAGAG AGATGCATCGCGAAAGAAGCGGGAGATAGATGCATAGGAATGCTGCGAGG AAGGGGTGAGAAGGACATACATTGGAGGTTACGTGGCAGTATATGTGGGG TGGCCCTCTGGTCGACGTTGATTCCGCGCCGCGGATGCCGACTAACTGCC GTCCGTGGTGCTTCACTCCAGCGGATCCGCTCTTCGTTTCCTGTTTTATC GTGATGATCAAACGGCAAAGCAACTCTTTTCAAAATTTCAGGTCTTCGAG GGCCTCAACGCGCTGGCGCGGACGCGGTGGCGCCTCAACACCGACGTCTT TGATGTGGCCAGGGAAGCGTGGCGTCGCGGTCTCGAGGTGGGCGAGTTGC CGTCGCAACGCGACTTGCCGGAGCCGCCGCCGCCGCCGCCCGGGTCGCCG GAGGAGGCGGTGCTGGCGGAGCAGGCACGCACCAACATGCGGGATGCGGC CAACATGCTGGCGGCGCGCAACCTGCGATACCGGAAGCGACGCGAGGCGG CGGCAGAGAAGGCCCGGGCAGCCAAGGCGGCAATGGCGAGCAAGACGGCA GCGGCGGTAGGCGAGACGGCGGGGGCGAGCAGGACGGGCGACACGATGGC TGCGAGCGACGCGATGGCGGCGGATGCCGCAGCGGCAGCGGCGGCGTCGT GGGCGCCCTCGAACACGGCGGCGTCGTCGGAGGGAGGGGACTCGGGGACG GCAGCGGAGCACGCGGCGGCGGCGGCGGCCGCCGAGGCGGAGGCAGCGGT GGAGGCGGAGGCAGCTGCGGAGGTGGAGGCGGAGGCGGCGGCGGCGGAGC TGGCGGCGGTGGCAGAAGACGACACTTTGGTGCTCGCACGGCGGATGCAC AACAAGATGCTGAAGCGCGTCCGGCAGCACAACCGCAACTTACACTCGCT GCGCTGCGACCACAAGCTCAAGATGGAGCTCGCGGAGAAGTTCCGCGACC ACGCTTTCTACTTTCCGTACAACGTCGACTTTCGGGGCCGTGCGTACCCG GTGCCGCCGAACCTGAACCACATGGGGAGCGACTTCAGCCGTGGCGTGCT GATGTTCGACGAGGCGCGGCCGCTGGGGGAGCGCGGCTTCTACTGGCTGA AGATCCACTGCGCCAACCTCTACGGCAAGGGCAAGGTATGGGGGAGGAGA AAGGAAGGAAGCAGGTCTGGCTCGCTTTTGAAGTGGTGTTGGGATGGTTT GGGGGTTAGATGGGCTGCCGTTCTTGCTGCGGTGACTGTCGGACGAATTT GATTGCCAAACGCTGAAGAAATGAAGATCCGGTGTGTGCAAGCGCAGCCC TGCTCTCCTTGGCGCGTCGTTCCACCTGCTCGACCGCTCTTTTACTTCTT GTGACCCGGTCAGGCGGTTGTTTGTCGATCCCGTACTGGACATGTTTGAT TAATTTGTCTTTTCTGATGCTGGCACCTAAACAAAAACTGCGTGCAGATG TCCTTCGACGAGCGGGCGGCGTTCGTGGACGAGCACTTCGCCGACGTAGT CGACAGCGCAGAGCGGCCGCTTGACGGCGGCGGCTGGTGGAAGGGCGGCG AGAAGCCGTGGCAGTGCCTGGCCGTGTGCATGGAGCTCTCGCAGGCAGCG GCGGCGCCGGGAGGGCCCGCGACGTACAAGTCGCGGCTGCCGGTGCATCA GGACGGTAGCTGCAACGGGCTGCAACACTACGCGGCGCTCGGGAGGGATG AGGCCGGCGGCGAGCAGGTCAGTCGGTCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6158:42..3420+

>mRNA_P-wetherbeei_contig6158.1.1 ID=mRNA_P-wetherbeei_contig6158.1.1|Name=mRNA_P-wetherbeei_contig6158.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1665bp|location=Sequence derived from alignment at P-wetherbeei_contig6158:42..3420+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCAAATCGCCTGGGAGCTGGAGAGCCAGCGGAAGGCGATGGACTCGTA
CCGGCAGATGGTCGAGTCGCTGCAGAAGCGCGGCCTCGGCGAAGGCATGC
GCGCCGTGCAGCGGCAGCTGCTGCGCTGGTACCGGCCGCTGCGGGACGCC
ATCGCCGATGAGCAGGCGAAGGTCTGGCGGCAGGAACGCGGCCCTGACAG
GCCGCTTTACGGCCCACTCATGGTGCTGCTGCAGGCCGACAAGCTGGCGT
TGCTGACACTGCACGAGCTGGTGGGGCACGTGCTGCAGACGGGAAACAGT
GGCATGCCCACCGTCACGGCGTGCCTTGCCGTCGCCGACGCCATCCAGAT
GGAGGTGAACCTGTGCCGGCTGCAAAAGACGCTGGGCGGGGAGGCGGTGC
TGGCGGCGCTGCAGCGGTCGGGGCGGTCGCAAGTGCGGCAGGTCAACAAC
AAGGCCAAGCGTGCGCTCGACATGCTTGACGTCACCGATTGGCCCAAGTC
CGTCAAGGTGAAGCTGGGGGCGATGCTGCTGAAGCTGATGATGGATACAG
CGACGCTTGAAGACAACGGCGGGTGCGCCTTCATCCACCAAATGGTCAAC
GTCACCAATAAGAACCGCCTGCCCGCCAAAAGTCAGAAGGGGCGCATCCA
GATGAAGGAGGCCGCGTACCGGCTGATGGTGCGCCAGTCGGGCGGCATGG
CGCAGCTCATGACCATGCGCTACTTGCCCATGCTGGTAGAGCCGCGGCCG
TGGACGCGGGCCGACCGCGGCGCGTACCTGCAGCTGAAGACGAACGTGAT
GCGGCACCGCGGCTGCCAGGGCCAGGTGGACGCCCTCCGGACTGCTGACC
TCGACCAGCAACTCTTTTCAAAATTTCAGGTCTTCGAGGGCCTCAACGCG
CTGGCGCGGACGCGGTGGCGCCTCAACACCGACGTCTTTGATGTGGCCAG
GGAAGCGTGGCGTCGCGGTCTCGAGGTGGGCGAGTTGCCGTCGCAACGCG
ACTTGCCGGAGCCGCCGCCGCCGCCGCCCGGGTCGCCGGAGGAGGCGCTG
GCGGCGGTGGCAGAAGACGACACTTTGGTGCTCGCACGGCGGATGCACAA
CAAGATGCTGAAGCGCGTCCGGCAGCACAACCGCAACTTACACTCGCTGC
GCTGCGACCACAAGCTCAAGATGGAGCTCGCGGAGAAGTTCCGCGACCAC
GCTTTCTACTTTCCGTACAACGTCGACTTTCGGGGCCGTGCGTACCCGGT
GCCGCCGAACCTGAACCACATGGGGAGCGACTTCAGCCGTGGCGTGCTGA
TGTTCGACGAGGCGCGGCCGCTGGGGGAGCGCGGCTTCTACTGGCTGAAG
ATCCACTGCGCCAACCTCTACGGCAAGGGCAAGATGTCCTTCGACGAGCG
GGCGGCGTTCGTGGACGAGCACTTCGCCGACGTAGTCGACAGCGCAGAGC
GGCCGCTTGACGGCGGCGGCTGGTGGAAGGGCGGCGAGAAGCCGTGGCAG
TGCCTGGCCGTGTGCATGGAGCTCTCGCAGGCAGCGGCGGCGCCGGGAGG
GCCCGCGACGTACAAGTCGCGGCTGCCGGTGCATCAGGACGGTAGCTGCA
ACGGGCTGCAACACTACGCGGCGCTCGGGAGGGATGAGGCCGGCGGCGAG
CAGGTCAGTCGGTCG
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