prot_P-wetherbeei_contig6149.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6149.1.2
Unique Nameprot_P-wetherbeei_contig6149.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length380
Homology
BLAST of mRNA_P-wetherbeei_contig6149.1.2 vs. uniprot
Match: A0A835YKE1_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKE1_9STRA)

HSP 1 Score: 215 bits (547), Expect = 9.560e-63
Identity = 133/369 (36.04%), Postives = 184/369 (49.86%), Query Frame = 0
Query:   19 RLWASSADGKEWKTVENVPFHPRMSVSALVEADGTVFCGYEAPFPLALSPG----------EAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVGMIR--TIRGSDGVQSEAIVDLATTPYAHTRKVTALALGTNDAGSL-LFSGGEEGFVRVWQQRDGKLVAAGELPGHVRGVTAMVATQGLLWTASRDTTIRVWNMSTAGCIGVIGAASGGGHRGEVTCLAYMPDPDKAAXXXXXXXXXXXXXGLTGGHVLSASLDHTIRVWNAGDGTSAYEFDAKEAVTALACVPVSSAGPLILYGLQNGSVAIRDYPGFGLAFELLHAFYHVGHSRPVRAILPLAMPTTAAGGPLYFASADDSGKMCMWELALPP 374
            ++W ++ADG  W     V   P +SV++L+  D  V C YEAPF LA  P           +                             +TVGMIR   +RG +    E ++     PYAHT  +  LA   + AG+L LFSGG+EG +R W+ +       G L GHVRGVT +     +LW+AS+D T+RVW+ +T  C+G+IG+  G GH+G VTC+A                      G  G ++++ S D                    ++VTAL C   S +GPL+L G  +GS+A+RD+PGF LAFEL  A  +VGH  PVRA+LPL +P    G  LYF S  + GKM MW++AL P
Sbjct:   63 QMW-TTADGAVWNEAAKVDLTPHLSVTSLLVVDPFVACAYEAPFALAAQPXXXXXXXXXXXQQQRGYGGAPGALRGDDAAGALQPPRAERMITVGMIRMLNLRGGEPAAVEVVIS-DKVPYAHTHPINCLAQLKDAAGALVLFSGGDEGLIRAWKAQGTGFQLGGVLEGHVRGVTCLCMVGNMLWSASKDHTVRVWDTATMACLGIIGSTGGLGHKGAVTCMA----------------GPLSIEGEQGEYMVTGSAD--------------------KSVTALTCFKTSPSGPLLLIGSDDGSIALRDFPGFSLAFELSAAVLNVGHRTPVRALLPLEIP----GPNLYFMSGAEDGKMMMWQMALKP 389          
BLAST of mRNA_P-wetherbeei_contig6149.1.2 vs. uniprot
Match: D8LJM7_ECTSI (C3H1-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJM7_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 3.980e-41
Identity = 108/377 (28.65%), Postives = 171/377 (45.36%), Query Frame = 0
Query:    1 MLQWQGQ--NVFTASADGVLRLWASSADGKEWKTVENVPFHPRMSVSALVEADGTVFCGYEAPFPLALSPGEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVGMIRTIRGSDGVQSEAIVDLATTPYAHTRKVTALALGTNDAGSLLFSGGEEGFVRVWQQRD--GKLVAAGELPGHVRGVTAMVAT--QGLLWTASRDTTIRVWNMSTAGCIGVIGAASGGGHRGEVTCLAYMPDPDKAAXXXXXXXXXXXXXGLTGGHVLSASLDHTIRVWNAGDGTSAYEFDAKEAVTALACV-PVSSAGPLILYGLQNGSVAIRDYPGFGLAFELLHAFYHVGHSRPVRAILPLAMPTTAAGGPLYFASADDSGKMCMWEL 370
            ++QW+ +  +VF+A  DG +++W S+ DG  W  V +V       V  L E +G ++ GY  P+                                     VTV  +R +  + G   E +  +  T +AH  ++  + +    A   +++G EEG +  W +           +L GH R +T++V+T   G+LW++S D TIR+WN  T  C+  I     GGH G V  LA      +               G    +V+S S D T+ V+ A DG   Y+      V+A+A   P      L+L G ++G++A+R++P F LAFE+     +VGHS+PV A+LP   P+   G   YF SA + G M  W +
Sbjct:  111 LVQWKDKPDHVFSACDDGTVKMW-STTDGSTWTQVTSVQMTEWRHVGDLQEVEGVLYVGYGTPYA--------------------------------HLADVTVDALRVMDLTSGSTQEVVSSV--TGFAHASRINRIMVAKVGAEPRVYTGDEEGRITAWARPSPGAPFAQLAQLEGHARAITSLVSTASNGMLWSSSEDGTIRIWNTGTNACVHTI-TKDNGGHEGPVAALAIGQSAAE---------------GTLAEYVISGSKDGTMGVFQAADGGLTYKHKCGTGVSAIAAFDPTPGTSALLLVGYEDGTIAVRNFPEFALAFEIHPTSLYVGHSKPVLALLPFNNPSIDDG---YFLSAGEDGTMMCWNV 433          
BLAST of mRNA_P-wetherbeei_contig6149.1.2 vs. uniprot
Match: A0A067CFV3_SAPPC (Uncharacterized protein (Fragment) n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CFV3_SAPPC)

HSP 1 Score: 84.0 bits (206), Expect = 4.060e-14
Identity = 94/386 (24.35%), Postives = 148/386 (38.34%), Query Frame = 0
Query:    6 GQNVFTASADGVLRLWA-----SSADGKEWKT-VENVPFHPRMSV----SALVEADGTVFCGYEAPFPLALSPGEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVGMIRTIR-GSDGVQSEAIVDLATTPYAHTRKVTALALGTNDA--GSLLFSGGEEGFVRVWQ--QRDGKLVAAGELPGHVRGVTAMVATQ----GLLWTASRDTTIRVWNMSTAGCIGVIGAASGGGHRGEVTCLAYMPDPDKAAXXXXXXXXXXXXXGLTGGHVLSASLDHTIRVWNAGDGTSAYEFDAKEAVTALACVPVSSA-GPLILYGLQNGSVAIRDYPGFGLAFELLHAFYHVGHSRPVRAILPLAMPTTAAGGPLY-FASADDSGKMCMWEL 370
            GQ  FTAS+DG LRLWA      +A   + K  ++ +P      V    S+L+     +F GYE   P                                    V VG I+     +  +    +   A  P+A  R VT+LA+  + A    ++FSGG +G +  W           AG + GH   +T +   Q      L ++SRD TIR+W+++T  C  V+  A+GG H   V  +       +                     ++S+  D  I VW      +    +  ++     C    +  GPL+L G  +GS+ I++ P F           +VGH+  VR I+P         GP + F +     KM  W++
Sbjct:   83 GQQAFTASSDGTLRLWALDSMKEAAVIPQCKIEIDTLPVEKSKKVTEGVSSLLLESPFLFVGYEEQTPAI--------------------------------PDVPVGRIQCWNLENPSMPPMELAQSAEMPFAMYRNVTSLAMAKHPATGAPIIFSGGADGRIAYWMFDAATNAFTCAGVMEGHALAITRLKVVQLGATTALISSSRDHTIRIWDVATYKCGTVLSRATGG-HANIVLDIEIWVSNGEP-------------------FLISSGYDQQIIVWQLSPPFAVMYTETLDSPALALCTTTDAVDGPLLLLGHDDGSIVIKELPSFKYKTVFGKTQTNVGHTDAVRRIVP---------GPAHTFFTTSGDRKMMAWQV 407          
BLAST of mRNA_P-wetherbeei_contig6149.1.2 vs. uniprot
Match: A0A024TG89_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A024TG89_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 3.860e-8
Identity = 95/394 (24.11%), Postives = 136/394 (34.52%), Query Frame = 0
Query:    4 WQG-QNVFTASADGVLRLWASSADGKEWKTVENVPF---------------HPRMSVSALVEADGTVFCGYEAPFPLALSPGEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVGMIR--TIRGSDGVQSEAIVDLATTPYAHTRKVTALALGTNDA-GSLL-FSGGEEGFVRVW--QQRDGKLVAAGELPGHVRGVTAMVATQ----GLLWTASRDTTIRVWNMSTAGCIGVIGAASGGGHRGEVTCLAYMPDPDKAAXXXXXXXXXXXXXGLTGGHVLSASLDHTIRVWNAGDGTSAYEFDAKEAVTALACVPVSSAGPLILYGLQNGSVAIRDYPGFGLAFELLHAFYHVGHSRPVRAILPLAMPTTAAGGPLY-FASADDSGKMCMWEL 370
            W+G Q  FT S DG +RLW    D   WK    +P                     ++AL      +F GYE P P    PG                                VG I+   +        E +V     P+AH R V AL +  N   G L+  SG  +G +R W      G     G + GH RG+T +   Q      L ++S D TIR+W+++T  C  V+ +                       XXXXX                            A      Y       + +L         PL+L G  +GS+++++ P F           +VGHS+PVR I+P         GPL+ F +     KM  W++
Sbjct:   83 WEGKQQAFTCSNDGTIRLW----DCATWKETAQIPVCNVELDILPTERDKKKTSEGIAALHLEGSHLFVGYEEPIPQL--PG------------------------------CPVGKIKCWNLDNPSAPPLEFMVS-PDMPFAHYRNVWALTVAKNPVTGELIVLSGSGDGRIRYWTFDAAMGCFKCGGLMEGHSRGITRLKTVQLGATTALISSSMDHTIRIWDLATFKCGTVLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------XXXXXXXXXAPPFAKVYADTVDLPILSLCISSDGQDAPLLLMGHDDGSISVKELPSFNYKMAFGKVLNNVGHSQPVRRIIP---------GPLHTFFTVSMDNKMMAWQV 411          
BLAST of mRNA_P-wetherbeei_contig6149.1.2 vs. uniprot
Match: A0A6D2KWK4_9BRAS (Uncharacterized protein n=4 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2KWK4_9BRAS)

HSP 1 Score: 59.3 bits (142), Expect = 4.750e-6
Identity = 45/153 (29.41%), Postives = 67/153 (43.79%), Query Frame = 0
Query:  122 LATTPYAHTRKVTALALGTNDAGSLLFSGGEEGFVRVWQQRD--GKLVAAGELPGHVRGVTAMVATQGLLWTASRDTTIRVWNMSTA--GCIGVIGAASGGGHRGEVTCLA-YMPDPDKAAXXXXXXXXXXXXXGLTGGHVLSASLDHTIRVW 269
            L  T   H   + ALAL   +  SLL+SGG +G + VW++ +  G +   G L GH   V  +V    +L + S D  +R+W  S     C+ ++      GHRG V CLA  + D    A                  ++ S  LD  ++VW
Sbjct:  252 LVATFSEHHSGINALALSCYNERSLLYSGGSDGSILVWERDEEGGDISVVGVLRGHRESVLCLVVISDILCSGSADKMVRLWKCSATDFSCLALLE-----GHRGPVKCLAGAIRDSGTQAEASY--------------YIYSGGLDSQVKVW 385          
BLAST of mRNA_P-wetherbeei_contig6149.1.2 vs. uniprot
Match: A0A2S8F5B5_9BACT (PSCyt1 domain-containing protein n=2 Tax=Pirellulaceae TaxID=2691357 RepID=A0A2S8F5B5_9BACT)

HSP 1 Score: 59.7 bits (143), Expect = 5.810e-6
Identity = 65/254 (25.59%), Postives = 106/254 (41.73%), Query Frame = 0
Query:  126 PYAHTRKVTALALGTNDAGSLLFSGGEEGFVRVWQQ-RDGKLVAAGELPGHVRG-VTAMVATQGLLW--TASRDTTIRVWNMSTAGCIGVIGAASGGGHRGEVTCLAYMPDPDKAAXXXXXXXXXXXXXGLTGGHVLSASLDHTIRVWNAGDGTSAYEFDAKEAVTALACVP-VSSAGPLILYGLQNGSVAIR----DYPGFGLAFELLHAFYHVGHSRPVRAILPLAMPTTAAGGPLYFASADDSGKMCMWEL 370
            P AH   V +LA G++  G+LL SGG     ++W++ RD +     E+    +   TA+  +    W  TA  +  I++W++ TA            GH   +T L +  D                     G H++SASLD +IR+WN+ DGT         A+ A+  +P V+ + P            +R    D       + ++ A    GH+  + A+        A G P++F SA   G +  W+L
Sbjct:  195 PAAHRDLVQSLAWGSD--GTLLASGGFRE-AKLWERPRDAR-----EMSFSTKAKTTALAVSLDRKWMATAGDNHVIQLWSLETAQP-----GPKMTGHSNLITSLRFTAD---------------------GTHLISASLDKSIRIWNSSDGTQTGLLQVPTAIQAIELLPAVAGSAPQQTLVAGGDDKILRTWLVDSKATAETWAMMEAKELPGHTDAITAL------AVAPGHPMHFYSASRDGSLRYWDL 408          
BLAST of mRNA_P-wetherbeei_contig6149.1.2 vs. uniprot
Match: A0A061J3W6_TRYRA (Guanine nucleotide-binding protein subunit beta-like protein n=1 Tax=Trypanosoma rangeli SC58 TaxID=429131 RepID=A0A061J3W6_TRYRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.670e-5
Identity = 32/92 (34.78%), Postives = 48/92 (52.17%), Query Frame = 0
Query:  129 HTRKVTALALGTNDAGSLLFSGGEEGFVRVW------QQRDGKLVAAGELPGHVRGVTAM--VATQGLLWTASRDTTIRVWNMSTAGCIGVI 212
            HT  V  L   T   G++LF+GG++G V+VW      +Q +          GH RGV A+  V+    LW+   DT IRVW++ +  C+ V+
Sbjct:  193 HTNAVRCLCSYTGSTGAVLFTGGDDGMVKVWDPYLPVKQSNENNPCVHTFVGHTRGVWALELVSPNNQLWSGGEDTNIRVWDLQSLKCVTVL 284          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6149.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A835YKE1_9STRA9.560e-6336.04WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
D8LJM7_ECTSI3.980e-4128.65C3H1-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A067CFV3_SAPPC4.060e-1424.35Uncharacterized protein (Fragment) n=2 Tax=Saprole... [more]
A0A024TG89_9STRA3.860e-824.11Uncharacterized protein n=6 Tax=Aphanomyces TaxID=... [more]
A0A6D2KWK4_9BRAS4.750e-629.41Uncharacterized protein n=4 Tax=Coluteocarpeae Tax... [more]
A0A2S8F5B5_9BACT5.810e-625.59PSCyt1 domain-containing protein n=2 Tax=Pirellula... [more]
A0A061J3W6_TRYRA1.670e-534.78Guanine nucleotide-binding protein subunit beta-li... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 189..203
score: 35.27
coord: 257..271
score: 32.25
coord: 9..23
score: 31.19
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 165..202
e-value: 0.27
score: 20.3
coord: 205..270
e-value: 1.2E-4
score: 31.4
coord: 119..160
e-value: 0.7
score: 18.0
coord: 321..369
e-value: 32.0
score: 7.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 126..159
e-value: 0.25
score: 12.3
coord: 171..202
e-value: 0.072
score: 14.0
coord: 218..270
e-value: 9.7E-4
score: 19.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 172..211
score: 9.97376
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 126..169
score: 10.541869
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..244
e-value: 8.7E-25
score: 89.0
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 245..373
e-value: 2.1E-10
score: 41.8
NoneNo IPR availablePANTHERPTHR44156FAMILY NOT NAMEDcoord: 129..368
coord: 6..278
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 189..203
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 5..370

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6149contigP-wetherbeei_contig6149:1149..2613 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6149.1.2mRNA_P-wetherbeei_contig6149.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6149 554..3087 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6149.1.2 ID=prot_P-wetherbeei_contig6149.1.2|Name=mRNA_P-wetherbeei_contig6149.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=380bp
MLQWQGQNVFTASADGVLRLWASSADGKEWKTVENVPFHPRMSVSALVEA
DGTVFCGYEAPFPLALSPGEAAAAASAAAAAGSAAGNGGAAAAAGAPPPV
TVGMIRTIRGSDGVQSEAIVDLATTPYAHTRKVTALALGTNDAGSLLFSG
GEEGFVRVWQQRDGKLVAAGELPGHVRGVTAMVATQGLLWTASRDTTIRV
WNMSTAGCIGVIGAASGGGHRGEVTCLAYMPDPDKAAAAAAAGGGAAAAA
GLTGGHVLSASLDHTIRVWNAGDGTSAYEFDAKEAVTALACVPVSSAGPL
ILYGLQNGSVAIRDYPGFGLAFELLHAFYHVGHSRPVRAILPLAMPTTAA
GGPLYFASADDSGKMCMWELALPPGFSQS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR036322WD40_repeat_dom_sf