mRNA_P-wetherbeei_contig6149.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6149.1.2 vs. uniprot
Match: A0A835YKE1_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKE1_9STRA) HSP 1 Score: 214 bits (546), Expect = 3.750e-59 Identity = 133/369 (36.04%), Postives = 184/369 (49.86%), Query Frame = 1
Query: 529 RLWASSADGKEWKTVENVPFHPRMSVSALVEADGTVFCGYEAPFPLALSPG----------EAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVGMIR--TIRGSDGVQSEAIVDLATTPYAHTRKVTALALGTNDAGSL-LFSGGEEGFVRVWQQRDGKLVAAGELPGHVRGVTAMVATQGLLWTASRDTTIRVWNMSTAGCIGVIGAASGGGHRGEVTCLAYMPDPDKAAXXXXXXXXXXXXXGLTGGHVLSASLDHTIRVWNAGDGTSAYEFDAKEAVTALACVPVSSAGPLILYGLQNGSVAIRDYPGFGLAFELLHAFYHVGHSRPVRAILPLAMPTTAAGGPLYFASADDSGKMCMWELALPP 1596
++W ++ADG W V P +SV++L+ D V C YEAPF LA P + +TVGMIR +RG + E ++ PYAHT + LA + AG+L LFSGG+EG +R W+ + G L GHVRGVT + +LW+AS+D T+RVW+ +T C+G+IG+ G GH+G VTC+A G G ++++ S D ++VTAL C S +GPL+L G +GS+A+RD+PGF LAFEL A +VGH PVRA+LPL +P G LYF S + GKM MW++AL P
Sbjct: 63 QMW-TTADGAVWNEAAKVDLTPHLSVTSLLVVDPFVACAYEAPFALAAQPXXXXXXXXXXXQQQRGYGGAPGALRGDDAAGALQPPRAERMITVGMIRMLNLRGGEPAAVEVVIS-DKVPYAHTHPINCLAQLKDAAGALVLFSGGDEGLIRAWKAQGTGFQLGGVLEGHVRGVTCLCMVGNMLWSASKDHTVRVWDTATMACLGIIGSTGGLGHKGAVTCMA----------------GPLSIEGEQGEYMVTGSAD--------------------KSVTALTCFKTSPSGPLLLIGSDDGSIALRDFPGFSLAFELSAAVLNVGHRTPVRALLPLEIP----GPNLYFMSGAEDGKMMMWQMALKP 389
BLAST of mRNA_P-wetherbeei_contig6149.1.2 vs. uniprot
Match: D8LJM7_ECTSI (C3H1-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJM7_ECTSI) HSP 1 Score: 196 bits (498), Expect = 8.100e-52 Identity = 146/485 (30.10%), Postives = 221/485 (45.57%), Query Frame = 1
Query: 178 VSSSLLCPLAPTSTTLRGAYFGNR----SSYRG-GASXXXXXXXXXXXXXXXPVVGTAGDTFNVDVCRHNLTGTCTYGENCRHAHVIQRLAETATSPHN----AAVHAMLQWQGQ--NVFTASADGVLRLWASSADGKEWKTVENVPFHPRMSVSALVEADGTVFCGYEAPFPLALSPGEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVGMIRTIRGSDGVQSEAIVDLATTPYAHTRKVTALALGTNDAGSLLFSGGEEGFVRVWQQRD--GKLVAAGELPGHVRGVTAMVAT--QGLLWTASRDTTIRVWNMSTAGCIGVIGAASGGGHRGEVTCLAYMPDPDKAAXXXXXXXXXXXXXGLTGGHVLSASLDHTIRVWNAGDGTSAYEFDAKEAVTALACV-PVSSAGPLILYGLQNGSVAIRDYPGFGLAFELLHAFYHVGHSRPVRAILPLAMPTTAAGGPLYFASADDSGKMCMWEL 1584
V SL CPL+ + RG + +R SSY G G XXXXXXXX GDT VC+ G C +CRH H +Q+++E S + AV +++QW+ + +VF+A DG +++W S+ DG W V +V V L E +G ++ GY P+ VTV +R + + G E + + T +AH ++ + + A +++G EEG + W + +L GH R +T++V+T G+LW++S D TIR+WN T C+ I GGH G V LA + G +V+S S D T+ V+ A DG Y+ V+A+A P L+L G ++G++A+R++P F LAFE+ +VGHS+PV A+LP P+ G YF SA + G M W +
Sbjct: 3 VQESLSCPLSVPRNSGRGGRYSSRGGGDSSYEGRGGRGGYNPAGXXXXXXXXXXXXXXGDTITFSVCKFYAAGNCDRAASCRHRHAVQKVSEAVVSEESDGFRGAVRSLVQWKDKPDHVFSACDDGTVKMW-STTDGSTWTQVTSVQMTEWRHVGDLQEVEGVLYVGYGTPYA--------------------------------HLADVTVDALRVMDLTSGSTQEVVSSV--TGFAHASRINRIMVAKVGAEPRVYTGDEEGRITAWARPSPGAPFAQLAQLEGHARAITSLVSTASNGMLWSSSEDGTIRIWNTGTNACVHTI-TKDNGGHEGPVAALAIGQSAAE---------------GTLAEYVISGSKDGTMGVFQAADGGLTYKHKCGTGVSAIAAFDPTPGTSALLLVGYEDGTIAVRNFPEFALAFEIHPTSLYVGHSKPVLALLPFNNPSIDDG---YFLSAGEDGTMMCWNV 433
BLAST of mRNA_P-wetherbeei_contig6149.1.2 vs. uniprot
Match: A0A067CFV3_SAPPC (Uncharacterized protein (Fragment) n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CFV3_SAPPC) HSP 1 Score: 101 bits (251), Expect = 4.250e-19 Identity = 110/440 (25.00%), Postives = 174/440 (39.55%), Query Frame = 1
Query: 331 TAGDTF-NVDVCRHNLTGTCTYGENCRHAHVIQRLAETATSPHNAAVHAMLQWQGQNVFTASADGVLRLWA-----SSADGKEWKT-VENVPFHPRMSV----SALVEADGTVFCGYEAPFPLALSPGEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVGMIRTIR-GSDGVQSEAIVDLATTPYAHTRKVTALALGTNDA--GSLLFSGGEEGFVRVWQ--QRDGKLVAAGELPGHVRGVTAMVATQ----GLLWTASRDTTIRVWNMSTAGCIGVIGAASGGGHRGEVTCLAYMPDPDKAAXXXXXXXXXXXXXGLTGGHVLSASLDHTIRVWNAGDGTSAYEFDAKEAVTALACVPVSSA-GPLILYGLQNGSVAIRDYPGFGLAFELLHAFYHVGHSRPVRAILPLAMPTTAAGGPLY-FASADDSGKMCMWEL 1584
+ G+ F + ++C +L C +NCR H ++RL S HN V + W GQ FTAS+DG LRLWA +A + K ++ +P V S+L+ +F GYE P V VG I+ + + + A P+A R VT+LA+ + A ++FSGG +G + W AG + GH +T + Q L ++SRD TIR+W+++T C V+ A+GG H V + + ++S+ D I VW + + ++ C + GPL+L G +GS+ I++ P F +VGH+ VR I+P GP + F + KM W++
Sbjct: 33 SGGNRFAHCEICTFHLDDRC-QRDNCRAPHFLKRLG--MASGHNGTVRDVALW-GQQAFTASSDGTLRLWALDSMKEAAVIPQCKIEIDTLPVEKSKKVTEGVSSLLLESPFLFVGYEEQTPAI--------------------------------PDVPVGRIQCWNLENPSMPPMELAQSAEMPFAMYRNVTSLAMAKHPATGAPIIFSGGADGRIAYWMFDAATNAFTCAGVMEGHALAITRLKVVQLGATTALISSSRDHTIRIWDVATYKCGTVLSRATGG-HANIVLDIEIWVSNGEP-------------------FLISSGYDQQIIVWQLSPPFAVMYTETLDSPALALCTTTDAVDGPLLLLGHDDGSIVIKELPSFKYKTVFGKTQTNVGHTDAVRRIVP---------GPAHTFFTTSGDRKMMAWQV 407
BLAST of mRNA_P-wetherbeei_contig6149.1.2 vs. uniprot
Match: A0A024TG89_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A024TG89_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 2.760e-12 Identity = 108/437 (24.71%), Postives = 154/437 (35.24%), Query Frame = 1
Query: 355 DVCRHNLTGTCTYGENCRHAHVIQRLAETATSPHNAAVHAMLQWQG-QNVFTASADGVLRLWASSADGKEWKTVENVPF---------------HPRMSVSALVEADGTVFCGYEAPFPLALSPGEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVGMIR--TIRGSDGVQSEAIVDLATTPYAHTRKVTALALGTNDA-GSLL-FSGGEEGFVRVW--QQRDGKLVAAGELPGHVRGVTAMVATQ----GLLWTASRDTTIRVWNMSTAGCIGVIGAASGGGHRGEVTCLAYMPDPDKAAXXXXXXXXXXXXXGLTGGHVLSASLDHTIRVWNAGDGTSAYEFDAKEAVTALACVPVSSAGPLILYGLQNGSVAIRDYPGFGLAFELLHAFYHVGHSRPVRAILPLAMPTTAAGGPLY-FASADDSGKMCMWEL 1584
+VC L CT C H H ++RL H AV ++ W+G Q FT S DG +RLW D WK +P ++AL +F GYE P P PG VG I+ + E +V P+AH R V AL + N G L+ SG +G +R W G G + GH RG+T + Q L ++S D TIR+W+++T C V+ + XXXXX A Y + +L PL+L G +GS+++++ P F +VGHS+PVR I+P GPL+ F + KM W++
Sbjct: 43 EVCAFYLDDRCTR-PTCNHPHFVKRLG--VAHGHTNAVKDVVLWEGKQQAFTCSNDGTIRLW----DCATWKETAQIPVCNVELDILPTERDKKKTSEGIAALHLEGSHLFVGYEEPIPQL--PG------------------------------CPVGKIKCWNLDNPSAPPLEFMVS-PDMPFAHYRNVWALTVAKNPVTGELIVLSGSGDGRIRYWTFDAAMGCFKCGGLMEGHSRGITRLKTVQLGATTALISSSMDHTIRIWDLATFKCGTVLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------XXXXXXXXXAPPFAKVYADTVDLPILSLCISSDGQDAPLLLMGHDDGSISVKELPSFNYKMAFGKVLNNVGHSQPVRRIIP---------GPLHTFFTVSMDNKMMAWQV 411
BLAST of mRNA_P-wetherbeei_contig6149.1.2 vs. uniprot
Match: A0A225WL11_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A225WL11_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 8.820e-10 Identity = 69/265 (26.04%), Postives = 106/265 (40.00%), Query Frame = 1
Query: 334 AGDTFNVDVCRHNLTG-TCTY-----GENCRHAHVIQRLAETATSPHNAAVHAMLQW-QGQNVFTASADGVLRLWASSADGKEWKTVENVPFHPRM------------------------SVSALVEADGTVFCGYEAPFPLALSPGEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVGMIR--TIRGSDGVQSEAIVDLATTPYAHTRKVTALALGTNDAGSL-LFSGGEEGFVRVWQQRDG--KLVAAGELPGHVRGVTAM 1020
+G + +VCR + G C + G CR+ H ++ + ET H+AA+ ++ W + Q +FT SAD ++LW D W+ + + + V ALV +F G+E FP V+VGM+R + + E TTP+AHT V ALA+ T+ G+ LFSG +G +R WQ + + G + GHVRGVT +
Sbjct: 37 SGSSVGNEVCRRFMDGGKCDFEQSSGGRPCRYPHFVKTIGETRG--HSAAIKDVVMWAERQQLFTCSADASIKLW----DCATWQEITTISVQDALPPAVANGGNGGGRGGNREKTPHTEGVVALVLCGPFLFAGFEGRFP--------------------------------HNPKVSVGMVRGWNLENAQAPPFEFAAS-ETTPFAHTMNVQALAVATDPTGNATLFSGSADGSIRYWQMDNATNQFKCRGVMEGHVRGVTRL 262
BLAST of mRNA_P-wetherbeei_contig6149.1.2 vs. uniprot
Match: A0A3M6VA38_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VA38_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 6.120e-8 Identity = 66/270 (24.44%), Postives = 104/270 (38.52%), Query Frame = 1
Query: 331 TAGDTFNVDVCRHNL-TGTCTY-----GENCRHAHVIQRLAETATSPHNAAVHAMLQW-QGQNVFTASADGVLRLWASSADGKEWKTVENVPFHPRMSVSALVEADGTV----------------------------FCGYEAPFPLALSPGEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVGMIR--TIRGSDGVQSEAIVDLATTPYAHTRKVTALALGTNDAGSL-LFSGGEEGFVRVWQQRDG--KLVAAGELPGHVRGVTAM 1020
+ G + +VCR + +G C + G +CR+ H ++ + ET HN + + W + Q +FT SAD ++LW D W+ V + + S+ ++ T+ F G+E FP V+VGM+R + E +V A P+AH V ALA+ T+ G+ LFSG +G +R WQ + G + GHVRGVT +
Sbjct: 34 SGGSSVGNEVCRRFMDSGKCDFEQTSGGRSCRYPHFVKTIGETRG--HNGPIKDVTMWMERQQLFTCSADASIKLW----DCATWQEVTTINVQDALPPSSATKSSTTIGNTNGGNRRDKVPHTEGVVALVLCGPFLFAGFEGRFP--------------------------------PNPKVSVGMVRGWNLENPQTPPYEFVVSEAM-PFAHKMNVQALAVATDRTGNATLFSGSADGCIRYWQMDTAINQFKCGGVMEGHVRGVTRL 264
BLAST of mRNA_P-wetherbeei_contig6149.1.2 vs. uniprot
Match: H3GZ16_PHYRM (Uncharacterized protein n=19 Tax=Phytophthora TaxID=4783 RepID=H3GZ16_PHYRM) HSP 1 Score: 63.9 bits (154), Expect = 6.160e-7 Identity = 65/257 (25.29%), Postives = 99/257 (38.52%), Query Frame = 1
Query: 355 DVCRHNLTG-TCTY-----GENCRHAHVIQRLAETATSPHNAAVHAMLQWQG-QNVFTASADGVLRLWASSADGKEWKTVENVPFHPRM-----------------------SVSALVEADGTVFCGYEAPFPLALSPGEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVGMIR--TIRGSDGVQSEAIVDLATTPYAHTRKVTALALGTNDAGSL-LFSGGEEGFVRVWQ--QRDGKLVAAGELPGHVRGVTAM 1020
+VCR + G C + G CR+ H ++ + ET H+ A+ + W + +FT +AD ++LW + W+ V + + V ALV +F G+E FP V+VGM+R + + E V T P+AHT V ALA+ T+ G+ LFSG +G +R WQ + G + GHVRGVT +
Sbjct: 69 EVCRRFMDGGKCEFEQTSGGRPCRYPHFVRTIGETRG--HSGAIKDVAMWPDREQLFTCAADASIKLWNCAT----WQEVTTINVQDALPPSANGNGSGGRGGNRDKTPHTEGVVALVICGPFLFAGFEGRFP--------------------------------PNPKVSVGMVRGWNLENAQAPPFEFAVS-ETMPFAHTMNVQALAVATDPTGNATLFSGSADGCIRYWQLDTASNQFKCRGVMEGHVRGVTRL 286
BLAST of mRNA_P-wetherbeei_contig6149.1.2 vs. uniprot
Match: A0A0P1AY69_PLAHL (Cdc4 and related F-box and WD-40 proteins n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AY69_PLAHL) HSP 1 Score: 63.5 bits (153), Expect = 7.520e-7 Identity = 64/260 (24.62%), Postives = 104/260 (40.00%), Query Frame = 1
Query: 334 AGDTFNVDVCRHNLTG-TCTY-----GENCRHAHVIQRLAETATSPHNAAVHAMLQW-QGQNVFTASADGVLRLW-------------------ASSADGKEWKTVENVPFHPRMS-VSALVEADGTVFCGYEAPFPLALSPGEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVGMIRTIR-GSDGVQSEAIVDLATTPYAHTRKVTALALGTNDAGSL-LFSGGEEGFVRVWQ--QRDGKLVAAGELPGHVRGVTAM 1020
+G + +VCR + G C + G CR+ H ++ + ET H+ ++ ++ W + Q +FT +AD ++LW ++ A +N P M V++LV +F G+E FP V+VGM+R + + L TP+AHT V A+A+ T+ G+ LFSG +G +R WQ + G + HVRGVT +
Sbjct: 34 SGSSVGNEVCRRFMDGGKCEFEQTSGGRPCRYPHFVKTIGETRG--HSGSIKDVVMWTERQQLFTCAADACIKLWDCATWQEITTISVQDVLPPSAKASNNNGGRKDNRDKSPHMEGVTSLVLCGPFLFAGFEGRFPF--------------------------------NPKVSVGMMRGWNLENPQIPPFEFAALDGTPFAHTMNVQAVAIATDPMGNATLFSGSADGSIRYWQLDTATNQFKCLGVMDRHVRGVTRL 259
BLAST of mRNA_P-wetherbeei_contig6149.1.2 vs. uniprot
Match: A0A484E8G9_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E8G9_BRELC) HSP 1 Score: 61.2 bits (147), Expect = 4.050e-6 Identity = 65/267 (24.34%), Postives = 104/267 (38.95%), Query Frame = 1
Query: 334 AGDTFNVDVCRHNLTG-TCTY-----GENCRHAHVIQRLAETATSPHNAAVHAMLQW-QGQNVFTASADGVLRLWASSADGKEWKTVENVPFHP-------------------------RMSVSALVEADGTVFCGYEAPFPLALSPGEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVGMIR--TIRGSDGVQSE-AIVDLATTPYAHTRKVTALALGTNDAGSL-LFSGGEEGFVRVWQ--QRDGKLVAAGELPGHVRGVTAM 1020
+G + +VCR + G C + G CR+ H ++ + ET H+ ++ ++ W + Q +FT +AD ++LW D W+ + + R V ALV +F G+E FP V+VGM+R + E + D+ P+AH+ V ALA+ T+ G+ LFSG +G +R WQ + G + GHVRGVT +
Sbjct: 33 SGPSVGNEVCRRFMDGGKCEFEQTSGGRPCRYPHFVKTIGETRG--HSGSIKDVVMWAERQQLFTCAADASIKLW----DCATWQEITTISVQDALPPSVSSVSNGSGGRGDSRDKSAQREGVVALVLCGPFLFAGFEGRFPA--------------------------------NPKVSVGMMRGWNLENPQVPPFEFSASDMM--PFAHSMNVQALAVATDPTGNATLFSGSADGLIRYWQLDSASNQFKCCGVMEGHVRGVTRL 259
BLAST of mRNA_P-wetherbeei_contig6149.1.2 vs. uniprot
Match: A0A6D2KWK4_9BRAS (Uncharacterized protein n=4 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2KWK4_9BRAS) HSP 1 Score: 59.3 bits (142), Expect = 1.470e-5 Identity = 45/153 (29.41%), Postives = 67/153 (43.79%), Query Frame = 1
Query: 838 LATTPYAHTRKVTALALGTNDAGSLLFSGGEEGFVRVWQQRD--GKLVAAGELPGHVRGVTAMVATQGLLWTASRDTTIRVWNMSTA--GCIGVIGAASGGGHRGEVTCLA-YMPDPDKAAXXXXXXXXXXXXXGLTGGHVLSASLDHTIRVW 1281
L T H + ALAL + SLL+SGG +G + VW++ + G + G L GH V +V +L + S D +R+W S C+ ++ GHRG V CLA + D A ++ S LD ++VW
Sbjct: 252 LVATFSEHHSGINALALSCYNERSLLYSGGSDGSILVWERDEEGGDISVVGVLRGHRESVLCLVVISDILCSGSADKMVRLWKCSATDFSCLALLE-----GHRGPVKCLAGAIRDSGTQAEASY--------------YIYSGGLDSQVKVW 385 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6149.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6149.1.2 >prot_P-wetherbeei_contig6149.1.2 ID=prot_P-wetherbeei_contig6149.1.2|Name=mRNA_P-wetherbeei_contig6149.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=380bp MLQWQGQNVFTASADGVLRLWASSADGKEWKTVENVPFHPRMSVSALVEAback to top mRNA from alignment at P-wetherbeei_contig6149:554..3087- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6149.1.2 ID=mRNA_P-wetherbeei_contig6149.1.2|Name=mRNA_P-wetherbeei_contig6149.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2534bp|location=Sequence derived from alignment at P-wetherbeei_contig6149:554..3087- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6149:554..3087- >mRNA_P-wetherbeei_contig6149.1.2 ID=mRNA_P-wetherbeei_contig6149.1.2|Name=mRNA_P-wetherbeei_contig6149.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1140bp|location=Sequence derived from alignment at P-wetherbeei_contig6149:554..3087- (Phaeothamnion wetherbeei SAG_119_79)back to top |