prot_P-wetherbeei_contig6142.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6142.2.1
Unique Nameprot_P-wetherbeei_contig6142.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length107
Homology
BLAST of mRNA_P-wetherbeei_contig6142.2.1 vs. uniprot
Match: A0A835Z3Y7_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Y7_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.090e-10
Identity = 29/41 (70.73%), Postives = 35/41 (85.37%), Query Frame = 0
Query:   36 PHLVVVPSSVLSNWEAELRRFCPKLRVAVYHGSVANRARVR 76
            PHL+VVPSSVL+NW++EL RFCP L VA+YHGS A RA +R
Sbjct:  597 PHLIVVPSSVLANWQSELERFCPALEVAIYHGSQAERADMR 637          
BLAST of mRNA_P-wetherbeei_contig6142.2.1 vs. uniprot
Match: W4GVJ4_9STRA (Uncharacterized protein n=13 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GVJ4_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.290e-9
Identity = 27/46 (58.70%), Postives = 35/46 (76.09%), Query Frame = 0
Query:   36 PHLVVVPSSVLSNWEAELRRFCPKLRVAVYHGSVANRARVREELLP 81
            PHLV+VPSSVLSNW+ E+ RF P LRV  +HGS++ R  + +EL P
Sbjct:  440 PHLVIVPSSVLSNWKREIGRFAPSLRVRTFHGSISERQEIMDELQP 485          
BLAST of mRNA_P-wetherbeei_contig6142.2.1 vs. uniprot
Match: A0A397FBG6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397FBG6_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 2.380e-9
Identity = 27/46 (58.70%), Postives = 35/46 (76.09%), Query Frame = 0
Query:   36 PHLVVVPSSVLSNWEAELRRFCPKLRVAVYHGSVANRARVREELLP 81
            PHLV+VPSSVLSNW+ E+ RF P LRV  +HGS++ R  + +EL P
Sbjct:  242 PHLVIVPSSVLSNWKREIGRFAPSLRVRTFHGSISERQELMDELQP 287          
BLAST of mRNA_P-wetherbeei_contig6142.2.1 vs. uniprot
Match: A0A3R7AFR6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7AFR6_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 4.300e-9
Identity = 27/46 (58.70%), Postives = 35/46 (76.09%), Query Frame = 0
Query:   36 PHLVVVPSSVLSNWEAELRRFCPKLRVAVYHGSVANRARVREELLP 81
            PHLV+VPSSVLSNW+ E+ RF P LRV  +HGS++ R  + +EL P
Sbjct:   23 PHLVIVPSSVLSNWKREIGRFAPSLRVRTFHGSISERQDLMDELQP 68          
BLAST of mRNA_P-wetherbeei_contig6142.2.1 vs. uniprot
Match: A0A024UXM7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UXM7_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 6.130e-9
Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 0
Query:   36 PHLVVVPSSVLSNWEAELRRFCPKLRVAVYHGSVANRARVREELLP 81
            PHLV+VPSSVLSNW+ E+ RF P LRV  +HGS+  R  + +EL P
Sbjct:  435 PHLVIVPSSVLSNWKREIERFAPTLRVRTFHGSIDERNLIMDELQP 480          
BLAST of mRNA_P-wetherbeei_contig6142.2.1 vs. uniprot
Match: A0A8J9RD79_9CHLO (Probable SWI/SNF-related matrix-associated actin-dependent regulator n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RD79_9CHLO)

HSP 1 Score: 61.6 bits (148), Expect = 8.330e-9
Identity = 32/72 (44.44%), Postives = 47/72 (65.28%), Query Frame = 0
Query:   36 PHLVVVPSSVLSNWEAELRRFCPKLRVAVYHGSVANRARVREELLPIIKRRRGHDNGSXXXXXXXXXAEDSE 107
            PH++VVP+S+L NW+ EL+R+CP L+V +Y+G   +RA++REELL     RRG +  +          EDSE
Sbjct:  278 PHIIVVPASLLENWQRELQRWCPSLKVVLYYGK--DRAQLREELLEY---RRGQEQDTSEASGSAGEQEDSE 344          
BLAST of mRNA_P-wetherbeei_contig6142.2.1 vs. uniprot
Match: A0A4P9Y5E9_9FUNG (SNF2 family N-terminal domain-containing protein (Fragment) n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y5E9_9FUNG)

HSP 1 Score: 60.8 bits (146), Expect = 1.490e-8
Identity = 25/44 (56.82%), Postives = 31/44 (70.45%), Query Frame = 0
Query:   36 PHLVVVPSSVLSNWEAELRRFCPKLRVAVYHGSVANRARVREEL 79
            PHL+VVP+S + NWE E  +FCP L V VYHGS   RA +R+ L
Sbjct:   55 PHLIVVPTSTVGNWEREFTKFCPSLSVLVYHGSQGERAEIRDHL 98          
BLAST of mRNA_P-wetherbeei_contig6142.2.1 vs. uniprot
Match: A0A8H7W3H7_9FUNG (Uncharacterized protein n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7W3H7_9FUNG)

HSP 1 Score: 60.1 bits (144), Expect = 2.910e-8
Identity = 26/45 (57.78%), Postives = 31/45 (68.89%), Query Frame = 0
Query:   36 PHLVVVPSSVLSNWEAELRRFCPKLRVAVYHGSVANRARVREELL 80
            PHLV+VPSS + NW  E  RFCPKL V +YHGS+  R   R EL+
Sbjct:  444 PHLVIVPSSTIENWLREFERFCPKLTVRLYHGSIKERDEQRYELI 488          
BLAST of mRNA_P-wetherbeei_contig6142.2.1 vs. uniprot
Match: UPI000BA7F734 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 homolog n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA7F734)

HSP 1 Score: 56.6 bits (135), Expect = 3.440e-8
Identity = 25/45 (55.56%), Postives = 30/45 (66.67%), Query Frame = 0
Query:   36 PHLVVVPSSVLSNWEAELRRFCPKLRVAVYHGSVANRARVREELL 80
            PHL+VVPSS L NW+ ELR +CP L V  YHGS   R  +R  +L
Sbjct:   46 PHLIVVPSSTLDNWQRELRSWCPSLTVRCYHGSQDERKELRVRIL 90          
BLAST of mRNA_P-wetherbeei_contig6142.2.1 vs. uniprot
Match: I2CQL4_NANGC (SNF2-rel_dom domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQL4_NANGC)

HSP 1 Score: 55.5 bits (132), Expect = 4.570e-8
Identity = 23/42 (54.76%), Postives = 31/42 (73.81%), Query Frame = 0
Query:   36 PHLVVVPSSVLSNWEAELRRFCPKLRVAVYHGSVANRARVRE 77
            PHLVVVP+S L NWE E +RFCP L++  Y+GS   R ++R+
Sbjct:   24 PHLVVVPTSCLVNWETEFKRFCPALKILPYYGSAPARKQLRQ 65          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6142.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z3Y7_9STRA1.090e-1070.73SNF2 family N-terminal domain-containing protein n... [more]
W4GVJ4_9STRA1.290e-958.70Uncharacterized protein n=13 Tax=Aphanomyces astac... [more]
A0A397FBG6_9STRA2.380e-958.70Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A3R7AFR6_9STRA4.300e-958.70Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A024UXM7_9STRA6.130e-958.70Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A8J9RD79_9CHLO8.330e-944.44Probable SWI/SNF-related matrix-associated actin-d... [more]
A0A4P9Y5E9_9FUNG1.490e-856.82SNF2 family N-terminal domain-containing protein (... [more]
A0A8H7W3H7_9FUNG2.910e-857.78Uncharacterized protein n=1 Tax=Thamnidium elegans... [more]
UPI000BA7F7343.440e-855.56SWI/SNF-related matrix-associated actin-dependent ... [more]
I2CQL4_NANGC4.570e-854.76SNF2-rel_dom domain-containing protein (Fragment) ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000330SNF2, N-terminalPFAMPF00176SNF2-rel_domcoord: 36..72
e-value: 9.9E-8
score: 31.2
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 16..95
e-value: 3.4E-13
score: 50.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..107
NoneNo IPR availablePANTHERPTHR10799:SF964SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A CONTAINING DEAD/H BOX 1coord: 24..80
NoneNo IPR availablePANTHERPTHR10799SNF2/RAD54 HELICASE FAMILYcoord: 24..80
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 32..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6142contigP-wetherbeei_contig6142:3201..3521 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6142.2.1mRNA_P-wetherbeei_contig6142.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6142 3201..3521 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6142.2.1 ID=prot_P-wetherbeei_contig6142.2.1|Name=mRNA_P-wetherbeei_contig6142.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=107bp
TAEAAKAAEAADSAHTESAAATAALTEDEAEAPHLPHLVVVPSSVLSNWE
AELRRFCPKLRVAVYHGSVANRARVREELLPIIKRRRGHDNGSGRGRGGG
GGAEDSE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000330SNF2_N
IPR038718SNF2-like_sf
IPR027417P-loop_NTPase