prot_P-wetherbeei_contig6.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6.1.1
Unique Nameprot_P-wetherbeei_contig6.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length246
Homology
BLAST of mRNA_P-wetherbeei_contig6.1.1 vs. uniprot
Match: UPI001ED87873 (activated RNA polymerase II transcriptional coactivator p15 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED87873)

HSP 1 Score: 56.6 bits (135), Expect = 7.010e-7
Identity = 30/64 (46.88%), Postives = 39/64 (60.94%), Query Frame = 0
Query:  110 HLSPRKAATVSVFQDTVLIDLRCYVKNQYNGGPQHTKKGISLTVDQWDRLKAAAPEIDRQVEQM 173
            HL   K A V  FQ  V +D+R Y   Q +G  +  KKGISL+VDQW R+K   PEID  +++M
Sbjct:   48 HLEKMKYAKVRTFQGKVYVDIREYY--QSDGKMKPGKKGISLSVDQWRRIKELMPEIDEAIKEM 109          
BLAST of mRNA_P-wetherbeei_contig6.1.1 vs. uniprot
Match: A0A8H4AHM5_GIGMA (Activated RNA polymerase II transcriptional coactivator p15-like n=1 Tax=Gigaspora margarita TaxID=4874 RepID=A0A8H4AHM5_GIGMA)

HSP 1 Score: 57.4 bits (137), Expect = 9.320e-7
Identity = 26/63 (41.27%), Postives = 42/63 (66.67%), Query Frame = 0
Query:  111 LSPRKAATVSVFQDTVLIDLRCYVKNQYNGGPQHTKKGISLTVDQWDRLKAAAPEIDRQVEQM 173
            LS ++  T+  F++ VLID R Y K++ +G    TKKGISL +DQW++LK    +ID ++++ 
Sbjct:   91 LSDKRRVTIREFKNMVLIDFREYYKSKDDGEYHPTKKGISLQIDQWNKLKELIDDIDEEIKKF 153          
BLAST of mRNA_P-wetherbeei_contig6.1.1 vs. uniprot
Match: A0A397U2M4_9GLOM (Transcriptional Coactivator p15-domain-containing protein (Fragment) n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397U2M4_9GLOM)

HSP 1 Score: 54.7 bits (130), Expect = 1.510e-6
Identity = 25/63 (39.68%), Postives = 41/63 (65.08%), Query Frame = 0
Query:  111 LSPRKAATVSVFQDTVLIDLRCYVKNQYNGGPQHTKKGISLTVDQWDRLKAAAPEIDRQVEQM 173
            LS ++  T+  F++ VL+D R Y K++ +G     KKGISL +DQW++LK    +ID +V++ 
Sbjct:   10 LSDKRRVTIREFKNMVLVDFREYFKSKDDGEYHPGKKGISLQIDQWNKLKELIDDIDEEVKKF 72          
BLAST of mRNA_P-wetherbeei_contig6.1.1 vs. uniprot
Match: F6ZYN8_CIOIN (Activated RNA polymerase II transcriptional coactivator p15 n=2 Tax=Ciona intestinalis TaxID=7719 RepID=F6ZYN8_CIOIN)

HSP 1 Score: 52.8 bits (125), Expect = 2.330e-5
Identity = 26/67 (38.81%), Postives = 42/67 (62.69%), Query Frame = 0
Query:  107 EPMHLSPRKAATVSVFQDTVLIDLRCYVKNQYNGGPQHTKKGISLTVDQWDRLKAAAPEIDRQVEQM 173
            E +HL   K   V  F+D +LID+R +   Q +G  +  KKGISL+ +QW++LK +  E+D +++Q 
Sbjct:   58 EKIHLGKMKFIDVRTFKDKILIDIREHY--QKDGEIKPGKKGISLSTEQWEKLKMSMEEVDSRIQQF 122          
BLAST of mRNA_P-wetherbeei_contig6.1.1 vs. uniprot
Match: A0A397TM97_9GLOM (Transcriptional Coactivator p15-domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TM97_9GLOM)

HSP 1 Score: 52.0 bits (123), Expect = 3.000e-5
Identity = 25/64 (39.06%), Postives = 43/64 (67.19%), Query Frame = 0
Query:  111 LSPRKAATVSVFQDTVLIDLRCYVKNQYNGGPQHTKKGISLTVDQWDRLKAAAPEIDRQVEQMR 174
            LS +K  T+  +++ VLID R + + + +G  Q TKKGISL +DQW++LK    +ID ++ +++
Sbjct:   42 LSNKKRVTIREWKNMVLIDFREFFETK-DGNIQPTKKGISLQLDQWNKLKELIHDIDNEIRKLK 104          
BLAST of mRNA_P-wetherbeei_contig6.1.1 vs. uniprot
Match: UPI0004417D13 (transcription cofactor Pc4 n=1 Tax=Punctularia strigosozonata (strain HHB-11173) TaxID=741275 RepID=UPI0004417D13)

HSP 1 Score: 50.4 bits (119), Expect = 4.800e-5
Identity = 27/58 (46.55%), Postives = 36/58 (62.07%), Query Frame = 0
Query:  111 LSPRKAATVSVFQDTVLIDLRCYVKNQYNGGPQHTKKGISLTVDQWDRLKAAAPEIDR 168
            L   K ATVS F   V ++LR Y  ++  G  +  KKGI+LT++QW+ LK  A EIDR
Sbjct:   10 LGKLKRATVSAFGKGVYLNLREYYLDKSTGEAKPGKKGITLTLEQWETLKEHADEIDR 67          
BLAST of mRNA_P-wetherbeei_contig6.1.1 vs. uniprot
Match: A0A1X7U2Q5_AMPQE (PC4 domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U2Q5_AMPQE)

HSP 1 Score: 51.6 bits (122), Expect = 4.920e-5
Identity = 27/67 (40.30%), Postives = 41/67 (61.19%), Query Frame = 0
Query:  104 DMTEPMHLSPRKAATVSVFQDTVLIDLRCYVKNQYNGGPQHTKKGISLTVDQWDRLKAAAPEIDRQV 170
            D  E + LS ++   V  F+  ++ID+R Y  N  +G  +  KKGISL+VDQW++LK A   ID ++
Sbjct:   44 DTEELIPLSAKRFVNVRTFKGRIMIDIREYYVND-DGENRPGKKGISLSVDQWEKLKEAMETIDERI 109          
BLAST of mRNA_P-wetherbeei_contig6.1.1 vs. uniprot
Match: UPI001403A617 (activated RNA polymerase II transcriptional coactivator p15 n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI001403A617)

HSP 1 Score: 52.8 bits (125), Expect = 5.130e-5
Identity = 29/63 (46.03%), Postives = 39/63 (61.90%), Query Frame = 0
Query:  111 LSPRKAATVSVFQDTVLIDLRCYVKNQYNGGPQHTKKGISLTVDQWDRLKAAAPEIDRQVEQM 173
            LS  +  +V  F+  VL+D+R Y     +G  + TKKGISL VDQW RLK   P+ID  V++M
Sbjct:  106 LSKMRYVSVREFKGKVLVDVREYYDK--DGDMKPTKKGISLAVDQWARLKELMPDIDAAVKKM 166          
BLAST of mRNA_P-wetherbeei_contig6.1.1 vs. uniprot
Match: A0A1Y1YTM3_9FUNG (Putative single-stranded DNA binding protein P9 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YTM3_9FUNG)

HSP 1 Score: 51.2 bits (121), Expect = 7.370e-5
Identity = 30/76 (39.47%), Postives = 47/76 (61.84%), Query Frame = 0
Query:   99 NSLVFDMTEP-MHLSPRKAATVSVFQDTVLIDLRCYVKNQYNGGPQHTKKGISLTVDQWDRLKAAAPEIDRQVEQM 173
            NS V D  E    LS +K  +V  +++ VL+D R +  +  NG  + TKKGI+L++DQW +LK  A E+D  ++Q+
Sbjct:   42 NSKVNDDGEQYFELSSKKRLSVRKWKNMVLVDFREFFTDS-NGVVRPTKKGITLSLDQWKKLKELANEVDDAIDQL 116          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
UPI001ED878737.010e-746.88activated RNA polymerase II transcriptional coacti... [more]
A0A8H4AHM5_GIGMA9.320e-741.27Activated RNA polymerase II transcriptional coacti... [more]
A0A397U2M4_9GLOM1.510e-639.68Transcriptional Coactivator p15-domain-containing ... [more]
F6ZYN8_CIOIN2.330e-538.81Activated RNA polymerase II transcriptional coacti... [more]
A0A397TM97_9GLOM3.000e-539.06Transcriptional Coactivator p15-domain-containing ... [more]
UPI0004417D134.800e-546.55transcription cofactor Pc4 n=1 Tax=Punctularia str... [more]
A0A1X7U2Q5_AMPQE4.920e-540.30PC4 domain-containing protein n=1 Tax=Amphimedon q... [more]
UPI001403A6175.130e-546.03activated RNA polymerase II transcriptional coacti... [more]
A0A1Y1YTM3_9FUNG7.370e-539.47Putative single-stranded DNA binding protein P9 n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009044ssDNA-binding transcriptional regulatorGENE3D2.30.31.10Transcriptional Coactivator Pc4; Chain Acoord: 109..172
e-value: 1.9E-15
score: 58.2
IPR009044ssDNA-binding transcriptional regulatorSUPERFAMILY54447ssDNA-binding transcriptional regulator domaincoord: 110..172
IPR003173Transcriptional coactivator p15 (PC4), C-terminalPFAMPF02229PC4coord: 110..161
e-value: 9.5E-13
score: 47.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 231..245
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 200..215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..245
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..92
IPR045125RNA polymerase II transcriptional coactivator Sub1/Tcp4-likePANTHERPTHR13215RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATORcoord: 43..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6contigP-wetherbeei_contig6:2563..3667 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6.1.1mRNA_P-wetherbeei_contig6.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6 2179..3891 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6.1.1 ID=prot_P-wetherbeei_contig6.1.1|Name=mRNA_P-wetherbeei_contig6.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=246bp
MSINTATRALGAVHFGEVHRLILQQIGAACRWSSSRSTVEAGGFWESVKR
DAEKSESYKRAKAGDGPGYRNFNPQAAASSSPSSEAGPAAGAGDDSWANS
LVFDMTEPMHLSPRKAATVSVFQDTVLIDLRCYVKNQYNGGPQHTKKGIS
LTVDQWDRLKAAAPEIDRQVEQMRWSLVKNLAPPADDDDGDGADGDGDDG
SSDGGSRDGDSRDGDSSGGRGSSGSDGGGESLRRGGEHNIGVVRP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009044ssDNA-bd_transcriptional_reg
IPR003173PC4_C
IPR045125Sub1/Tcp4-like