prot_P-wetherbeei_contig57600.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig57600.1.1
Unique Name	prot_P-wetherbeei_contig57600.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	125

Homology

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BLAST of mRNA_P-wetherbeei_contig57600.1.1 vs. uniprot
Match: A0A3D4ILI2_9BACT (DNA-binding response regulator n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3D4ILI2_9BACT)

HSP 1 Score: 210 bits (535), Expect = 5.140e-67
Identity = 107/124 (86.29%), Postives = 115/124 (92.74%), Query Frame = 0

Query:    1 MHDEVHLVKEILKAGVNGYVLKKDTHKELLNAIHDVSNGKVYLSSDVNKMLITNLNNPDEGKLLTDREREILKLIAKEYTNKDIAEELFISERTVETHRKNIFKKTATNSLVGLIKFAYANNLI 124
            MHDEVHLVKEILKAG+NGYVLKKDT  ELL AI +V+ GKV+LS+D+NK+LI NL NPDEGKLLTDREREI+KLIAKEYTNK IAEELFISERTVETHRKNIFKKT TNSLVGLIKFAYANNLI
Sbjct:   98 MHDEVHLVKEILKAGINGYVLKKDTQHELLQAIKEVAAGKVFLSNDINKLLIVNLQNPDEGKLLTDREREIVKLIAKEYTNKQIAEELFISERTVETHRKNIFKKTGTNSLVGLIKFAYANNLI 221

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BLAST of mRNA_P-wetherbeei_contig57600.1.1 vs. uniprot
Match: A0A401UAH1_9BACT (DNA-binding response regulator n=2 Tax=Chryseotalea sanaruensis TaxID=2482724 RepID=A0A401UAH1_9BACT)

HSP 1 Score: 198 bits (504), Expect = 1.590e-62
Identity = 101/124 (81.45%), Postives = 113/124 (91.13%), Query Frame = 0

Query:    1 MHDEVHLVKEILKAGVNGYVLKKDTHKELLNAIHDVSNGKVYLSSDVNKMLITNLNNPDEGKLLTDREREILKLIAKEYTNKDIAEELFISERTVETHRKNIFKKTATNSLVGLIKFAYANNLI 124
            MHDEVHL KEILK GV+GYVLKKDT +ELL AI +V  G+VYLSSD+NK+LI NL+NPDEG+LLT+REREI+KLIAKEY+NK IAE LFISERTVETHRKNIF+KT TNSLVGLIKFAYANNLI
Sbjct:   82 MHDEVHLAKEILKGGVDGYVLKKDTQQELLKAIQEVRAGRVYLSSDINKLLIMNLDNPDEGRLLTEREREIVKLIAKEYSNKLIAEALFISERTVETHRKNIFRKTGTNSLVGLIKFAYANNLI 205

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BLAST of mRNA_P-wetherbeei_contig57600.1.1 vs. uniprot
Match: A0A7Y7EEF0_9BACT (Response regulator transcription factor n=1 Tax=Cytophagia bacterium TaxID=2026730 RepID=A0A7Y7EEF0_9BACT)

HSP 1 Score: 195 bits (496), Expect = 3.680e-62
Identity = 99/124 (79.84%), Postives = 110/124 (88.71%), Query Frame = 0

Query:    1 MHDEVHLVKEILKAGVNGYVLKKDTHKELLNAIHDVSNGKVYLSSDVNKMLITNLNNPDEGKLLTDREREILKLIAKEYTNKDIAEELFISERTVETHRKNIFKKTATNSLVGLIKFAYANNLI 124
            MHDE HLVKEILK GVNGYVLKKDT  ELL AI+ V  GK+YLS+D+N ML+ +L  PDEGKLLT REREIL+LI+KEYTN+DIAEELFISERTVETHRKNIF+KT TNS+VGLIKFAYANNLI
Sbjct:   21 MHDESHLVKEILKEGVNGYVLKKDTKDELLEAIYSVRGGKMYLSNDINSMLVKSLYEPDEGKLLTSREREILQLISKEYTNRDIAEELFISERTVETHRKNIFRKTKTNSIVGLIKFAYANNLI 144

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BLAST of mRNA_P-wetherbeei_contig57600.1.1 vs. uniprot
Match: A0A239F3X0_9BACT (Two component transcriptional regulator, LuxR family n=2 Tax=Ekhidna lutea TaxID=447679 RepID=A0A239F3X0_9BACT)

HSP 1 Score: 195 bits (496), Expect = 4.070e-61
Identity = 98/124 (79.03%), Postives = 111/124 (89.52%), Query Frame = 0

Query:    1 MHDEVHLVKEILKAGVNGYVLKKDTHKELLNAIHDVSNGKVYLSSDVNKMLITNLNNPDEGKLLTDREREILKLIAKEYTNKDIAEELFISERTVETHRKNIFKKTATNSLVGLIKFAYANNLI 124
            MHDE HL+KEILK GV+GY+LKKD+H+EL+NA+  V NGKVYLSSDVN ML+  LN  +E KLLTDREREILKLIAKE+TNK +AEELFISERTVETHRKNIF+KT TN+LVGLIKFAYANNLI
Sbjct:   96 MHDEAHLIKEILKEGVDGYILKKDSHEELVNAVRAVKNGKVYLSSDVNTMLMKGLNGTEEQKLLTDREREILKLIAKEFTNKQMAEELFISERTVETHRKNIFRKTKTNNLVGLIKFAYANNLI 219

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BLAST of mRNA_P-wetherbeei_contig57600.1.1 vs. uniprot
Match: UPI00191CD0C6 (response regulator transcription factor n=1 Tax=Marivirga atlantica TaxID=1548457 RepID=UPI00191CD0C6)

HSP 1 Score: 194 bits (493), Expect = 7.480e-61
Identity = 96/123 (78.05%), Postives = 112/123 (91.06%), Query Frame = 0

Query:    2 HDEVHLVKEILKAGVNGYVLKKDTHKELLNAIHDVSNGKVYLSSDVNKMLITNLNNPDEGKLLTDREREILKLIAKEYTNKDIAEELFISERTVETHRKNIFKKTATNSLVGLIKFAYANNLI 124
            HDEVHLVKEILK GV GY+LKKDTHKEL++AIH +S GK+++SS++NK+L+ +L+ PDE +LLTDREREILKLIA+EYTNK IAE LFISERTVETHRKNIF+KT TNSLVGLIKF YANNLI
Sbjct:   83 HDEVHLVKEILKEGVQGYILKKDTHKELISAIHQISEGKMFMSSEINKLLVDSLSFPDEHRLLTDREREILKLIAQEYTNKMIAEALFISERTVETHRKNIFRKTKTNSLVGLIKFGYANNLI 205

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BLAST of mRNA_P-wetherbeei_contig57600.1.1 vs. uniprot
Match: S2DQZ8_INDAL (Receiver component of a two-component response regulator n=2 Tax=Cyclobacteriaceae TaxID=563798 RepID=S2DQZ8_INDAL)

HSP 1 Score: 193 bits (491), Expect = 1.510e-60
Identity = 95/124 (76.61%), Postives = 112/124 (90.32%), Query Frame = 0

Query:    1 MHDEVHLVKEILKAGVNGYVLKKDTHKELLNAIHDVSNGKVYLSSDVNKMLITNLNNPDEGKLLTDREREILKLIAKEYTNKDIAEELFISERTVETHRKNIFKKTATNSLVGLIKFAYANNLI 124
            MHDE HLVKEILK GV+GYVLK D+H+ELL AI  + NGK+YLS+D+N+++I +L  PDE +LLTDREREILKLIAKE++NKDIAE+LFISERTVETHRKNIF+KT TN+LVGLIKFAYANNLI
Sbjct:   82 MHDETHLVKEILKEGVSGYVLKNDSHRELLQAIETIKNGKIYLSNDINRIIINSLQFPDEERLLTDREREILKLIAKEFSNKDIAEQLFISERTVETHRKNIFRKTKTNTLVGLIKFAYANNLI 205

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BLAST of mRNA_P-wetherbeei_contig57600.1.1 vs. uniprot
Match: A0A1N7JJW8_9BACT (Two component transcriptional regulator, LuxR family n=3 Tax=Belliella TaxID=232244 RepID=A0A1N7JJW8_9BACT)

HSP 1 Score: 193 bits (490), Expect = 2.140e-60
Identity = 95/124 (76.61%), Postives = 113/124 (91.13%), Query Frame = 0

Query:    1 MHDEVHLVKEILKAGVNGYVLKKDTHKELLNAIHDVSNGKVYLSSDVNKMLITNLNNPDEGKLLTDREREILKLIAKEYTNKDIAEELFISERTVETHRKNIFKKTATNSLVGLIKFAYANNLI 124
            MHDEVHLVKEILK G+NGY+LK D+HKELL+AI  V  GK+YLS+D+NK++I +L  PDE ++LTDREREILKLIAKE++N+DIA++LFISERTVETHRKNIF+KT TNSLVGLIKFAYANNLI
Sbjct:   82 MHDEVHLVKEILKEGINGYILKNDSHKELLSAIAAVDAGKIYLSNDINKIIINSLQFPDEERMLTDREREILKLIAKEFSNRDIADQLFISERTVETHRKNIFRKTKTNSLVGLIKFAYANNLI 205

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BLAST of mRNA_P-wetherbeei_contig57600.1.1 vs. uniprot
Match: A0A5E8AXZ2_9BACT (Two component transcriptional regulator, LuxR family n=2 Tax=Imperialibacter TaxID=1649461 RepID=A0A5E8AXZ2_9BACT)

HSP 1 Score: 193 bits (491), Expect = 3.090e-60
Identity = 96/124 (77.42%), Postives = 110/124 (88.71%), Query Frame = 0

Query:    1 MHDEVHLVKEILKAGVNGYVLKKDTHKELLNAIHDVSNGKVYLSSDVNKMLITNLNNPDEGKLLTDREREILKLIAKEYTNKDIAEELFISERTVETHRKNIFKKTATNSLVGLIKFAYANNLI 124
            MHDE HLVKEILK G+ GY+LKKD+ KEL+ A+  +  G+ YLS+++N +LI NL NPDEGKLLT+REREILKLIAKEYTNKDIAEELFISERTVETHRKNIF+KT TNSLVGLIKFAYANNL+
Sbjct:  105 MHDEGHLVKEILKEGIKGYLLKKDSQKELIAALDQIRAGRTYLSNEINTLLIQNLQNPDEGKLLTEREREILKLIAKEYTNKDIAEELFISERTVETHRKNIFRKTKTNSLVGLIKFAYANNLV 228

[Close]

BLAST of mRNA_P-wetherbeei_contig57600.1.1 vs. uniprot
Match: A0A1X7LFG0_9BACT (Two component transcriptional regulator, LuxR family n=2 Tax=Marivirga sericea TaxID=1028 RepID=A0A1X7LFG0_9BACT)

HSP 1 Score: 192 bits (487), Expect = 6.500e-60
Identity = 96/123 (78.05%), Postives = 112/123 (91.06%), Query Frame = 0

Query:    2 HDEVHLVKEILKAGVNGYVLKKDTHKELLNAIHDVSNGKVYLSSDVNKMLITNLNNPDEGKLLTDREREILKLIAKEYTNKDIAEELFISERTVETHRKNIFKKTATNSLVGLIKFAYANNLI 124
            HDEVHLVKEILK GV GY+LKKDTH+EL++AI  VS GK+++S+++N+ML+ +LN P+E KLLTDREREILKLIAKEYTNK IAE LFISERTVETHRKNIF+KT TNSLVGLIKF+YANNLI
Sbjct:   85 HDEVHLVKEILKEGVQGYILKKDTHRELVSAITQVSRGKIFMSNEINQMLVESLNFPEEHKLLTDREREILKLIAKEYTNKMIAEALFISERTVETHRKNIFRKTKTNSLVGLIKFSYANNLI 207

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BLAST of mRNA_P-wetherbeei_contig57600.1.1 vs. uniprot
Match: A0A2E8N3K1_9RICK (DNA-binding response regulator n=3 Tax=Bacteria TaxID=2 RepID=A0A2E8N3K1_9RICK)

HSP 1 Score: 190 bits (483), Expect = 3.950e-59
Identity = 95/124 (76.61%), Postives = 109/124 (87.90%), Query Frame = 0

Query:    1 MHDEVHLVKEILKAGVNGYVLKKDTHKELLNAIHDVSNGKVYLSSDVNKMLITNLNNPDEGKLLTDREREILKLIAKEYTNKDIAEELFISERTVETHRKNIFKKTATNSLVGLIKFAYANNLI 124
            MHDE HLVKEILK GV+GY++KKD+H EL+NAI+ + +GK YLSSDVN +LI  LN   E KLLTDREREILKLI+KE+TNK IAEELFISERTVETHRKNIF+KT TN+LVGLIK+AYANNLI
Sbjct:   97 MHDEAHLVKEILKEGVDGYLIKKDSHNELINAIYSIKSGKTYLSSDVNSILIKGLNGEGEQKLLTDREREILKLISKEFTNKQIAEELFISERTVETHRKNIFRKTGTNNLVGLIKYAYANNLI 220

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig57600.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig57600.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A3D4ILI2_9BACT	5.140e-67	86.29	DNA-binding response regulator n=1 Tax=Cytophagale...	[more]
A0A401UAH1_9BACT	1.590e-62	81.45	DNA-binding response regulator n=2 Tax=Chryseotale...	[more]
A0A7Y7EEF0_9BACT	3.680e-62	79.84	Response regulator transcription factor n=1 Tax=Cy...	[more]
A0A239F3X0_9BACT	4.070e-61	79.03	Two component transcriptional regulator, LuxR fami...	[more]
UPI00191CD0C6	7.480e-61	78.05	response regulator transcription factor n=1 Tax=Ma...	[more]
S2DQZ8_INDAL	1.510e-60	76.61	Receiver component of a two-component response reg...	[more]
A0A1N7JJW8_9BACT	2.140e-60	76.61	Two component transcriptional regulator, LuxR fami...	[more]
A0A5E8AXZ2_9BACT	3.090e-60	77.42	Two component transcriptional regulator, LuxR fami...	[more]
A0A1X7LFG0_9BACT	6.500e-60	78.05	Two component transcriptional regulator, LuxR fami...	[more]
A0A2E8N3K1_9RICK	3.950e-59	76.61	DNA-binding response regulator n=3 Tax=Bacteria Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000792	Transcription regulator LuxR, C-terminal	PRINTS	PR00038	HTHLUXR	coord: 64..78 score: 41.57 coord: 94..106 score: 42.82 coord: 78..94 score: 41.31
IPR000792	Transcription regulator LuxR, C-terminal	SMART	SM00421	luxrmega5	coord: 61..118 e-value: 1.3E-22 score: 91.1
IPR000792	Transcription regulator LuxR, C-terminal	PFAM	PF00196	GerE	coord: 63..118 e-value: 3.0E-20 score: 71.5
IPR000792	Transcription regulator LuxR, C-terminal	PROSITE	PS50043	HTH_LUXR_2	coord: 57..122 score: 29.019037
IPR000792	Transcription regulator LuxR, C-terminal	CDD	cd06170	LuxR_C_like	coord: 64..118 e-value: 8.14063E-19 score: 72.182
None	No IPR available	GENE3D	3.40.50.2300		coord: 1..58 e-value: 1.8E-6 score: 29.8
None	No IPR available	PANTHER	PTHR44688:SF1	RESPONSE REGULATOR LIKE PROTEIN	coord: 2..115
None	No IPR available	PANTHER	PTHR44688	FAMILY NOT NAMED	coord: 2..115
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 60..121 e-value: 2.5E-23 score: 83.4
IPR011006	CheY-like superfamily	SUPERFAMILY	52172	CheY-like	coord: 2..51
IPR016032	Signal transduction response regulator, C-terminal effector	SUPERFAMILY	46894	C-terminal effector domain of the bipartite response regulators	coord: 57..124

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig57600	contig	P-wetherbeei_contig57600:107..481 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig57600.1.1	mRNA_P-wetherbeei_contig57600.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig57600 107..508 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig57600.1.1 ID=prot_P-wetherbeei_contig57600.1.1|Name=mRNA_P-wetherbeei_contig57600.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=125bp
MHDEVHLVKEILKAGVNGYVLKKDTHKELLNAIHDVSNGKVYLSSDVNKM
LITNLNNPDEGKLLTDREREILKLIAKEYTNKDIAEELFISERTVETHRK
NIFKKTATNSLVGLIKFAYANNLI*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000792	Tscrpt_reg_LuxR_C
IPR036388	WH-like_DNA-bd_sf
IPR011006	CheY-like_superfamily
IPR016032	Sig_transdc_resp-reg_C-effctor