prot_P-wetherbeei_contig57068.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig57068.1.1
Unique Nameprot_P-wetherbeei_contig57068.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length171
Homology
BLAST of mRNA_P-wetherbeei_contig57068.1.1 vs. uniprot
Match: A0A1H8W5H8_9PROT (Tripartite-type tricarboxylate transporter, receptor component TctC n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8W5H8_9PROT)

HSP 1 Score: 216 bits (549), Expect = 5.290e-67
Identity = 103/171 (60.23%), Postives = 127/171 (74.27%), Query Frame = 0
Query:    1 ITANDGAHTLFVANSAPISIAPFLFDQLPYDPIKDFSHAAMIGTTPNAFFVSSTIPVETLAQYVEWVKAQGKPVPFGSGGGGSIGHIVGEMFKNELHLQMEHVAYKGSTPMFQDMLGGHLKVGVNTLPEVWEFAKQGRLRVVALTAPTRAKIAPNVPTVVELGYPKLVAEN 171
            + A D  HTL ++NSAP+SIAP+LFD+ PYDPIKDF+H   IG+  NAF V   +P +T+ + V W+K QGK VPFGSGG GSIGHI+GEMFK EL L MEH+ Y+G+ PMFQDM+ G L   V TL EV   AK G+LR++ALT+  +A  AP+VP V ELGYPKLVAEN
Sbjct:   80 LAAKDDHHTLMLSNSAPLSIAPYLFDKPPYDPIKDFAHVVYIGSVANAFVVRPAVPAKTMPELVAWIKGQGKAVPFGSGGQGSIGHIIGEMFKAELGLNMEHIGYRGAAPMFQDMMAGQLDFAVVTLTEVLPLAKDGKLRMIALTSTQKAPSAPDVPLVTELGYPKLVAEN 250          
BLAST of mRNA_P-wetherbeei_contig57068.1.1 vs. uniprot
Match: A0A537MYH1_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537MYH1_9PROT)

HSP 1 Score: 212 bits (539), Expect = 1.620e-65
Identity = 100/164 (60.98%), Postives = 125/164 (76.22%), Query Frame = 0
Query:    8 HTLFVANSAPISIAPFLFDQLPYDPIKDFSHAAMIGTTPNAFFVSSTIPVETLAQYVEWVKAQGKPVPFGSGGGGSIGHIVGEMFKNELHLQMEHVAYKGSTPMFQDMLGGHLKVGVNTLPEVWEFAKQGRLRVVALTAPTRAKIAPNVPTVVELGYPKLVAEN 171
            HTL ++NSAP+SIAP+LFD+ PYDP+KDF H A IG+  NAF V   +P +T+ + ++W+K QGK VPFGSGG GSIGHI+GEMFK EL L MEH+ Y+G+ PMFQDM+ G L   V TL EV   AK G+LR++ALT+  +A  AP+VP V ELGYPKLVAEN
Sbjct:   85 HTLMLSNSAPLSIAPYLFDKPPYDPLKDFVHVAYIGSVANAFVVRPEVPAKTMPELIQWIKGQGKVVPFGSGGQGSIGHIIGEMFKAELGLSMEHIGYRGAAPMFQDMMAGQLDFAVVTLTEVLPLAKDGKLRMIALTSTQKAASAPDVPLVTELGYPKLVAEN 248          
BLAST of mRNA_P-wetherbeei_contig57068.1.1 vs. uniprot
Match: A0A1F3A8V7_9PROT (Uncharacterized protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1F3A8V7_9PROT)

HSP 1 Score: 211 bits (538), Expect = 2.290e-65
Identity = 101/164 (61.59%), Postives = 124/164 (75.61%), Query Frame = 0
Query:    8 HTLFVANSAPISIAPFLFDQLPYDPIKDFSHAAMIGTTPNAFFVSSTIPVETLAQYVEWVKAQGKPVPFGSGGGGSIGHIVGEMFKNELHLQMEHVAYKGSTPMFQDMLGGHLKVGVNTLPEVWEFAKQGRLRVVALTAPTRAKIAPNVPTVVELGYPKLVAEN 171
            HTL ++NSAPISIAP+LFD+ PYDP+KDF H   IG+  NAF V   +P + + + + W+KAQGKPVPFGSGG GSIGHI+GEMFK EL L MEH+ Y+G+ PMFQDM+ G L   V TL EV   AK G+LR++ALT+  +A  AP+VP V ELGYPKLVAEN
Sbjct:   85 HTLMLSNSAPISIAPYLFDKPPYDPLKDFVHVFYIGSVANAFVVRPAVPAKDMKELIAWIKAQGKPVPFGSGGQGSIGHIIGEMFKAELGLSMEHIGYRGAAPMFQDMMAGQLDFAVVTLTEVLPLAKDGKLRMLALTSTQKAPSAPDVPLVTELGYPKLVAEN 248          
BLAST of mRNA_P-wetherbeei_contig57068.1.1 vs. uniprot
Match: A0A1V6FLG4_9PROT (Tripartite tricarboxylate transporter family receptor n=1 Tax=Alphaproteobacteria bacterium ADurb.Bin100 TaxID=1852791 RepID=A0A1V6FLG4_9PROT)

HSP 1 Score: 196 bits (499), Expect = 2.060e-59
Identity = 96/167 (57.49%), Postives = 125/167 (74.85%), Query Frame = 0
Query:    5 DGAHTLFVANSAPISIAPFLFDQLPYDPIKDFSHAAMIGTTPNAFFVSSTIPVETLAQYVEWVKAQGKPVPFGSGGGGSIGHIVGEMFKNELHLQMEHVAYKGSTPMFQDMLGGHLKVGVNTLPEVWEFAKQGRLRVVALTAPTRAKIAPNVPTVVELGYPKLVAEN 171
            DG +TL ++N+APISI+PF+ D+ PYDPIK F+H A IG+ PN F V+ ++P +T+ + V W+KAQ KPV +GSGG GSIGHIVGEMFK +  L MEHV YKGS PM  D+LGG L+  V+TL +   F K G+L  +A+T+  R  +APNVPTV+E G+PKLVAEN
Sbjct:   88 DG-YTLLLSNTAPISISPFMLDKSPYDPIKSFTHIAYIGSVPNVFVVNPSVPAKTMTELVAWIKAQTKPVNYGSGGVGSIGHIVGEMFKQQYGLNMEHVPYKGSGPMHSDLLGGTLQFAVDTLTQNVPFIKDGKLVGIAVTSRQRMAMAPNVPTVIEAGFPKLVAEN 253          
BLAST of mRNA_P-wetherbeei_contig57068.1.1 vs. uniprot
Match: A0A1Y2R4S4_9BURK (Uncharacterized protein n=1 Tax=Hydrogenophaga sp. IBVHS1 TaxID=1985169 RepID=A0A1Y2R4S4_9BURK)

HSP 1 Score: 195 bits (496), Expect = 5.530e-59
Identity = 94/169 (55.62%), Postives = 127/169 (75.15%), Query Frame = 0
Query:    3 ANDGAHTLFVANSAPISIAPFLFDQLPYDPIKDFSHAAMIGTTPNAFFVSSTIPVETLAQYVEWVKAQGKPVPFGSGGGGSIGHIVGEMFKNELHLQMEHVAYKGSTPMFQDMLGGHLKVGVNTLPEVWEFAKQGRLRVVALTAPTRAKIAPNVPTVVELGYPKLVAEN 171
            A DG +TL ++N+APISI+PF+ D+ PYDP+K F+H A IG+ PN F V  ++P +T+ + V+W+ AQ KPV +GSGG GSIGHIVGEMFK +  L MEHV YKGS+PM  D+LGG L+  V+TL +   + K G+L  +A+T+  RA ++P+VP+VVE GYPKLVAEN
Sbjct:   84 APDG-YTLLLSNTAPISISPFMMDKSPYDPVKSFTHVAYIGSVPNVFVVHPSVPAKTMPELVKWINAQAKPVNYGSGGVGSIGHIVGEMFKQQYKLNMEHVPYKGSSPMHNDLLGGTLQFAVDTLTQNVPYMKDGKLTGIAVTSRGRAAMSPSVPSVVEAGYPKLVAEN 251          
BLAST of mRNA_P-wetherbeei_contig57068.1.1 vs. uniprot
Match: A0A1V3SJY0_9BURK (ABC transporter substrate-binding protein n=9 Tax=Betaproteobacteria TaxID=28216 RepID=A0A1V3SJY0_9BURK)

HSP 1 Score: 193 bits (491), Expect = 3.130e-58
Identity = 92/169 (54.44%), Postives = 128/169 (75.74%), Query Frame = 0
Query:    3 ANDGAHTLFVANSAPISIAPFLFDQLPYDPIKDFSHAAMIGTTPNAFFVSSTIPVETLAQYVEWVKAQGKPVPFGSGGGGSIGHIVGEMFKNELHLQMEHVAYKGSTPMFQDMLGGHLKVGVNTLPEVWEFAKQGRLRVVALTAPTRAKIAPNVPTVVELGYPKLVAEN 171
            A DG +TL ++N+AP+SI+PF+ D+ PYDP+K F+H A IG+ PN F V  ++P +T+ + V+W+ AQ  PV +GSGG GSIGHIVGEMFKN+  L+MEHV YKGS+PM  D+LGG L+  V+TL +   + + G+L  +A+T+  RA ++PNVP+VVE GYPKL+AEN
Sbjct:   84 APDG-YTLLLSNTAPMSISPFMMDKAPYDPVKSFTHIAHIGSVPNVFVVHPSVPAKTMPELVKWISAQTTPVNYGSGGVGSIGHIVGEMFKNQYKLKMEHVPYKGSSPMHTDLLGGQLQFAVDTLTQNVPYMRDGKLVGIAVTSRARAPMSPNVPSVVEAGYPKLLAEN 251          
BLAST of mRNA_P-wetherbeei_contig57068.1.1 vs. uniprot
Match: UPI000825EAD3 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Hydrogenophaga flava TaxID=65657 RepID=UPI000825EAD3)

HSP 1 Score: 192 bits (489), Expect = 6.090e-58
Identity = 92/169 (54.44%), Postives = 127/169 (75.15%), Query Frame = 0
Query:    3 ANDGAHTLFVANSAPISIAPFLFDQLPYDPIKDFSHAAMIGTTPNAFFVSSTIPVETLAQYVEWVKAQGKPVPFGSGGGGSIGHIVGEMFKNELHLQMEHVAYKGSTPMFQDMLGGHLKVGVNTLPEVWEFAKQGRLRVVALTAPTRAKIAPNVPTVVELGYPKLVAEN 171
            A DG +TL ++N+AP+SI+PF+ D+ PYDP+K F+H A IG+ PN F V  ++P +TL + ++W+ +Q KPV +GSGG GSIGHIVGEMFK E  L+MEHV YKGS+PM  D+LGG L+  V+TL +   + K G+L  +A+T+  RA ++P VP+VVE GYPKL+AEN
Sbjct:   83 APDG-YTLLLSNTAPMSISPFMMDKAPYDPVKSFTHIAYIGSVPNVFVVHPSVPAKTLPELIKWINSQDKPVNYGSGGVGSIGHIVGEMFKKEYKLKMEHVPYKGSSPMHTDLLGGQLQFAVDTLTQNVPYMKDGKLVGIAVTSRARAPMSPAVPSVVEAGYPKLLAEN 250          
BLAST of mRNA_P-wetherbeei_contig57068.1.1 vs. uniprot
Match: A0A7W1AR31_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7W1AR31_9PROT)

HSP 1 Score: 192 bits (488), Expect = 8.860e-58
Identity = 88/169 (52.07%), Postives = 126/169 (74.56%), Query Frame = 0
Query:    3 ANDGAHTLFVANSAPISIAPFLFDQLPYDPIKDFSHAAMIGTTPNAFFVSSTIPVETLAQYVEWVKAQGKPVPFGSGGGGSIGHIVGEMFKNELHLQMEHVAYKGSTPMFQDMLGGHLKVGVNTLPEVWEFAKQGRLRVVALTAPTRAKIAPNVPTVVELGYPKLVAEN 171
            A DG +T  ++N+AP+S++PF+ D  PYDPIK F+H   IG+ PN F V   +P +T+ +++ WVK Q  PVP+GSGG GSIGHIVGE+FK E  + ++HV Y+GS+PM  D+LGG +K  ++TLP+  +F K G+LR++A+T+  RA +AP+VPTV++L YP LVAEN
Sbjct:   84 APDG-YTFMLSNTAPVSLSPFMLDSPPYDPIKSFTHIVYIGSVPNVFVVHPDVPAKTVPEFIAWVKLQKDPVPYGSGGVGSIGHIVGELFKAEAGINLQHVGYRGSSPMHNDLLGGTIKFAIDTLPQNVQFQKSGKLRLLAVTSTKRASMAPDVPTVLDLQYPTLVAEN 251          
BLAST of mRNA_P-wetherbeei_contig57068.1.1 vs. uniprot
Match: A0A4Z0C499_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Ramlibacter rhizophilus TaxID=1781167 RepID=A0A4Z0C499_9BURK)

HSP 1 Score: 191 bits (485), Expect = 2.570e-57
Identity = 91/167 (54.49%), Postives = 124/167 (74.25%), Query Frame = 0
Query:    5 DGAHTLFVANSAPISIAPFLFDQLPYDPIKDFSHAAMIGTTPNAFFVSSTIPVETLAQYVEWVKAQGKPVPFGSGGGGSIGHIVGEMFKNELHLQMEHVAYKGSTPMFQDMLGGHLKVGVNTLPEVWEFAKQGRLRVVALTAPTRAKIAPNVPTVVELGYPKLVAEN 171
            DG +TL ++N+APISI+PF+ D+ PYDP+K F+H A IG+ PN F V  ++P  TL + V W+KAQ KPV +GSGG GSIGHIVGE+FK +  L MEHV YKGS PM  D+LGG L+  V+TL +   F K+ +L  +A+T+  R+ +APN+P+VVE+G PKL+A+N
Sbjct:   87 DG-YTLLLSNTAPISISPFMMDKAPYDPVKSFTHIAYIGSVPNVFVVHPSVPARTLPELVSWIKAQSKPVNYGSGGVGSIGHIVGEVFKQQYGLNMEHVPYKGSAPMHNDLLGGSLQFAVDTLTQNVPFMKENKLIGIAVTSRARSAMAPNLPSVVEVGAPKLIADN 252          
BLAST of mRNA_P-wetherbeei_contig57068.1.1 vs. uniprot
Match: A0A4Q3TG08_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A4Q3TG08_9BURK)

HSP 1 Score: 189 bits (479), Expect = 2.000e-56
Identity = 93/169 (55.03%), Postives = 123/169 (72.78%), Query Frame = 0
Query:    3 ANDGAHTLFVANSAPISIAPFLFDQLPYDPIKDFSHAAMIGTTPNAFFVSSTIPVETLAQYVEWVKAQGKPVPFGSGGGGSIGHIVGEMFKNELHLQMEHVAYKGSTPMFQDMLGGHLKVGVNTLPEVWEFAKQGRLRVVALTAPTRAKIAPNVPTVVELGYPKLVAEN 171
            A+   +TL ++N+APISI+PF+ D+ PY+P+K FSH A IG+ PN F V   +P +T+ + V W+KAQ KPV +GSGG GSIGHIVGE+FK +  L+MEHV YKGS PM  D+LGG L+  V+TL +   F K G+L  +A+T+  RA +A  VPTVVE G+PKLVAEN
Sbjct:   83 ASADGYTLLLSNTAPISISPFMLDKPPYEPVKGFSHIAYIGSVPNVFVVHPAVPAKTMPELVAWIKAQTKPVNYGSGGVGSIGHIVGEVFKQQYGLKMEHVPYKGSGPMHADLLGGTLQFAVDTLTQNVPFMKDGKLVGIAVTSRERAALATAVPTVVEAGFPKLVAEN 251          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57068.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1H8W5H8_9PROT5.290e-6760.23Tripartite-type tricarboxylate transporter, recept... [more]
A0A537MYH1_9PROT1.620e-6560.98Tripartite tricarboxylate transporter substrate bi... [more]
A0A1F3A8V7_9PROT2.290e-6561.59Uncharacterized protein n=2 Tax=Alphaproteobacteri... [more]
A0A1V6FLG4_9PROT2.060e-5957.49Tripartite tricarboxylate transporter family recep... [more]
A0A1Y2R4S4_9BURK5.530e-5955.62Uncharacterized protein n=1 Tax=Hydrogenophaga sp.... [more]
A0A1V3SJY0_9BURK3.130e-5854.44ABC transporter substrate-binding protein n=9 Tax=... [more]
UPI000825EAD36.090e-5854.44tripartite tricarboxylate transporter substrate bi... [more]
A0A7W1AR31_9PROT8.860e-5852.07Tripartite tricarboxylate transporter substrate bi... [more]
A0A4Z0C499_9BURK2.570e-5754.49Tripartite tricarboxylate transporter substrate bi... [more]
A0A4Q3TG08_9BURK2.000e-5655.03Tripartite tricarboxylate transporter substrate bi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.190.10coord: 46..169
e-value: 6.1E-49
score: 168.7
NoneNo IPR availablePANTHERPTHR42928:SF5BLR1237 PROTEINcoord: 4..169
NoneNo IPR availableSUPERFAMILY53850Periplasmic binding protein-like IIcoord: 34..164
IPR005064Bordetella uptake genePFAMPF03401TctCcoord: 2..169
e-value: 2.3E-34
score: 118.7
IPR005064Bordetella uptake genePANTHERPTHR42928TRICARBOXYLATE-BINDING PROTEINcoord: 4..169
IPR042100Bordetella uptake gene, domain 1GENE3D3.40.190.150Bordetella uptake gene, domain 1coord: 5..45
e-value: 6.1E-49
score: 168.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig57068contigP-wetherbeei_contig57068:1..513 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig57068.1.1mRNA_P-wetherbeei_contig57068.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig57068 1..513 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig57068.1.1 ID=prot_P-wetherbeei_contig57068.1.1|Name=mRNA_P-wetherbeei_contig57068.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=171bp
ITANDGAHTLFVANSAPISIAPFLFDQLPYDPIKDFSHAAMIGTTPNAFF
VSSTIPVETLAQYVEWVKAQGKPVPFGSGGGGSIGHIVGEMFKNELHLQM
EHVAYKGSTPMFQDMLGGHLKVGVNTLPEVWEFAKQGRLRVVALTAPTRA
KIAPNVPTVVELGYPKLVAEN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005064BUG
IPR042100Bug_dom1