mRNA_P-wetherbeei_contig57068.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57068.1.1 vs. uniprot
Match: A0A1H8W5H8_9PROT (Tripartite-type tricarboxylate transporter, receptor component TctC n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8W5H8_9PROT) HSP 1 Score: 216 bits (549), Expect = 5.290e-67 Identity = 103/171 (60.23%), Postives = 127/171 (74.27%), Query Frame = 1
Query: 1 ITANDGAHTLFVANSAPISIAPFLFDQLPYDPIKDFSHAAMIGTTPNAFFVSSTIPVETLAQYVEWVKAQGKPVPFGSGGGGSIGHIVGEMFKNELHLQMEHVAYKGSTPMFQDMLGGHLKVGVNTLPEVWEFAKQGRLRVVALTAPTRAKIAPNVPTVVELGYPKLVAEN 513
+ A D HTL ++NSAP+SIAP+LFD+ PYDPIKDF+H IG+ NAF V +P +T+ + V W+K QGK VPFGSGG GSIGHI+GEMFK EL L MEH+ Y+G+ PMFQDM+ G L V TL EV AK G+LR++ALT+ +A AP+VP V ELGYPKLVAEN
Sbjct: 80 LAAKDDHHTLMLSNSAPLSIAPYLFDKPPYDPIKDFAHVVYIGSVANAFVVRPAVPAKTMPELVAWIKGQGKAVPFGSGGQGSIGHIIGEMFKAELGLNMEHIGYRGAAPMFQDMMAGQLDFAVVTLTEVLPLAKDGKLRMIALTSTQKAPSAPDVPLVTELGYPKLVAEN 250
BLAST of mRNA_P-wetherbeei_contig57068.1.1 vs. uniprot
Match: A0A537MYH1_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537MYH1_9PROT) HSP 1 Score: 212 bits (539), Expect = 1.620e-65 Identity = 100/164 (60.98%), Postives = 125/164 (76.22%), Query Frame = 1
Query: 22 HTLFVANSAPISIAPFLFDQLPYDPIKDFSHAAMIGTTPNAFFVSSTIPVETLAQYVEWVKAQGKPVPFGSGGGGSIGHIVGEMFKNELHLQMEHVAYKGSTPMFQDMLGGHLKVGVNTLPEVWEFAKQGRLRVVALTAPTRAKIAPNVPTVVELGYPKLVAEN 513
HTL ++NSAP+SIAP+LFD+ PYDP+KDF H A IG+ NAF V +P +T+ + ++W+K QGK VPFGSGG GSIGHI+GEMFK EL L MEH+ Y+G+ PMFQDM+ G L V TL EV AK G+LR++ALT+ +A AP+VP V ELGYPKLVAEN
Sbjct: 85 HTLMLSNSAPLSIAPYLFDKPPYDPLKDFVHVAYIGSVANAFVVRPEVPAKTMPELIQWIKGQGKVVPFGSGGQGSIGHIIGEMFKAELGLSMEHIGYRGAAPMFQDMMAGQLDFAVVTLTEVLPLAKDGKLRMIALTSTQKAASAPDVPLVTELGYPKLVAEN 248
BLAST of mRNA_P-wetherbeei_contig57068.1.1 vs. uniprot
Match: A0A1F3A8V7_9PROT (Uncharacterized protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1F3A8V7_9PROT) HSP 1 Score: 211 bits (538), Expect = 2.290e-65 Identity = 101/164 (61.59%), Postives = 124/164 (75.61%), Query Frame = 1
Query: 22 HTLFVANSAPISIAPFLFDQLPYDPIKDFSHAAMIGTTPNAFFVSSTIPVETLAQYVEWVKAQGKPVPFGSGGGGSIGHIVGEMFKNELHLQMEHVAYKGSTPMFQDMLGGHLKVGVNTLPEVWEFAKQGRLRVVALTAPTRAKIAPNVPTVVELGYPKLVAEN 513
HTL ++NSAPISIAP+LFD+ PYDP+KDF H IG+ NAF V +P + + + + W+KAQGKPVPFGSGG GSIGHI+GEMFK EL L MEH+ Y+G+ PMFQDM+ G L V TL EV AK G+LR++ALT+ +A AP+VP V ELGYPKLVAEN
Sbjct: 85 HTLMLSNSAPISIAPYLFDKPPYDPLKDFVHVFYIGSVANAFVVRPAVPAKDMKELIAWIKAQGKPVPFGSGGQGSIGHIIGEMFKAELGLSMEHIGYRGAAPMFQDMMAGQLDFAVVTLTEVLPLAKDGKLRMLALTSTQKAPSAPDVPLVTELGYPKLVAEN 248
BLAST of mRNA_P-wetherbeei_contig57068.1.1 vs. uniprot
Match: A0A1V6FLG4_9PROT (Tripartite tricarboxylate transporter family receptor n=1 Tax=Alphaproteobacteria bacterium ADurb.Bin100 TaxID=1852791 RepID=A0A1V6FLG4_9PROT) HSP 1 Score: 196 bits (499), Expect = 2.060e-59 Identity = 96/167 (57.49%), Postives = 125/167 (74.85%), Query Frame = 1
Query: 13 DGAHTLFVANSAPISIAPFLFDQLPYDPIKDFSHAAMIGTTPNAFFVSSTIPVETLAQYVEWVKAQGKPVPFGSGGGGSIGHIVGEMFKNELHLQMEHVAYKGSTPMFQDMLGGHLKVGVNTLPEVWEFAKQGRLRVVALTAPTRAKIAPNVPTVVELGYPKLVAEN 513
DG +TL ++N+APISI+PF+ D+ PYDPIK F+H A IG+ PN F V+ ++P +T+ + V W+KAQ KPV +GSGG GSIGHIVGEMFK + L MEHV YKGS PM D+LGG L+ V+TL + F K G+L +A+T+ R +APNVPTV+E G+PKLVAEN
Sbjct: 88 DG-YTLLLSNTAPISISPFMLDKSPYDPIKSFTHIAYIGSVPNVFVVNPSVPAKTMTELVAWIKAQTKPVNYGSGGVGSIGHIVGEMFKQQYGLNMEHVPYKGSGPMHSDLLGGTLQFAVDTLTQNVPFIKDGKLVGIAVTSRQRMAMAPNVPTVIEAGFPKLVAEN 253
BLAST of mRNA_P-wetherbeei_contig57068.1.1 vs. uniprot
Match: A0A1Y2R4S4_9BURK (Uncharacterized protein n=1 Tax=Hydrogenophaga sp. IBVHS1 TaxID=1985169 RepID=A0A1Y2R4S4_9BURK) HSP 1 Score: 195 bits (496), Expect = 5.530e-59 Identity = 94/169 (55.62%), Postives = 127/169 (75.15%), Query Frame = 1
Query: 7 ANDGAHTLFVANSAPISIAPFLFDQLPYDPIKDFSHAAMIGTTPNAFFVSSTIPVETLAQYVEWVKAQGKPVPFGSGGGGSIGHIVGEMFKNELHLQMEHVAYKGSTPMFQDMLGGHLKVGVNTLPEVWEFAKQGRLRVVALTAPTRAKIAPNVPTVVELGYPKLVAEN 513
A DG +TL ++N+APISI+PF+ D+ PYDP+K F+H A IG+ PN F V ++P +T+ + V+W+ AQ KPV +GSGG GSIGHIVGEMFK + L MEHV YKGS+PM D+LGG L+ V+TL + + K G+L +A+T+ RA ++P+VP+VVE GYPKLVAEN
Sbjct: 84 APDG-YTLLLSNTAPISISPFMMDKSPYDPVKSFTHVAYIGSVPNVFVVHPSVPAKTMPELVKWINAQAKPVNYGSGGVGSIGHIVGEMFKQQYKLNMEHVPYKGSSPMHNDLLGGTLQFAVDTLTQNVPYMKDGKLTGIAVTSRGRAAMSPSVPSVVEAGYPKLVAEN 251
BLAST of mRNA_P-wetherbeei_contig57068.1.1 vs. uniprot
Match: A0A1V3SJY0_9BURK (ABC transporter substrate-binding protein n=9 Tax=Betaproteobacteria TaxID=28216 RepID=A0A1V3SJY0_9BURK) HSP 1 Score: 193 bits (491), Expect = 3.130e-58 Identity = 92/169 (54.44%), Postives = 128/169 (75.74%), Query Frame = 1
Query: 7 ANDGAHTLFVANSAPISIAPFLFDQLPYDPIKDFSHAAMIGTTPNAFFVSSTIPVETLAQYVEWVKAQGKPVPFGSGGGGSIGHIVGEMFKNELHLQMEHVAYKGSTPMFQDMLGGHLKVGVNTLPEVWEFAKQGRLRVVALTAPTRAKIAPNVPTVVELGYPKLVAEN 513
A DG +TL ++N+AP+SI+PF+ D+ PYDP+K F+H A IG+ PN F V ++P +T+ + V+W+ AQ PV +GSGG GSIGHIVGEMFKN+ L+MEHV YKGS+PM D+LGG L+ V+TL + + + G+L +A+T+ RA ++PNVP+VVE GYPKL+AEN
Sbjct: 84 APDG-YTLLLSNTAPMSISPFMMDKAPYDPVKSFTHIAHIGSVPNVFVVHPSVPAKTMPELVKWISAQTTPVNYGSGGVGSIGHIVGEMFKNQYKLKMEHVPYKGSSPMHTDLLGGQLQFAVDTLTQNVPYMRDGKLVGIAVTSRARAPMSPNVPSVVEAGYPKLLAEN 251
BLAST of mRNA_P-wetherbeei_contig57068.1.1 vs. uniprot
Match: UPI000825EAD3 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Hydrogenophaga flava TaxID=65657 RepID=UPI000825EAD3) HSP 1 Score: 192 bits (489), Expect = 6.090e-58 Identity = 92/169 (54.44%), Postives = 127/169 (75.15%), Query Frame = 1
Query: 7 ANDGAHTLFVANSAPISIAPFLFDQLPYDPIKDFSHAAMIGTTPNAFFVSSTIPVETLAQYVEWVKAQGKPVPFGSGGGGSIGHIVGEMFKNELHLQMEHVAYKGSTPMFQDMLGGHLKVGVNTLPEVWEFAKQGRLRVVALTAPTRAKIAPNVPTVVELGYPKLVAEN 513
A DG +TL ++N+AP+SI+PF+ D+ PYDP+K F+H A IG+ PN F V ++P +TL + ++W+ +Q KPV +GSGG GSIGHIVGEMFK E L+MEHV YKGS+PM D+LGG L+ V+TL + + K G+L +A+T+ RA ++P VP+VVE GYPKL+AEN
Sbjct: 83 APDG-YTLLLSNTAPMSISPFMMDKAPYDPVKSFTHIAYIGSVPNVFVVHPSVPAKTLPELIKWINSQDKPVNYGSGGVGSIGHIVGEMFKKEYKLKMEHVPYKGSSPMHTDLLGGQLQFAVDTLTQNVPYMKDGKLVGIAVTSRARAPMSPAVPSVVEAGYPKLLAEN 250
BLAST of mRNA_P-wetherbeei_contig57068.1.1 vs. uniprot
Match: A0A7W1AR31_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7W1AR31_9PROT) HSP 1 Score: 192 bits (488), Expect = 8.860e-58 Identity = 88/169 (52.07%), Postives = 126/169 (74.56%), Query Frame = 1
Query: 7 ANDGAHTLFVANSAPISIAPFLFDQLPYDPIKDFSHAAMIGTTPNAFFVSSTIPVETLAQYVEWVKAQGKPVPFGSGGGGSIGHIVGEMFKNELHLQMEHVAYKGSTPMFQDMLGGHLKVGVNTLPEVWEFAKQGRLRVVALTAPTRAKIAPNVPTVVELGYPKLVAEN 513
A DG +T ++N+AP+S++PF+ D PYDPIK F+H IG+ PN F V +P +T+ +++ WVK Q PVP+GSGG GSIGHIVGE+FK E + ++HV Y+GS+PM D+LGG +K ++TLP+ +F K G+LR++A+T+ RA +AP+VPTV++L YP LVAEN
Sbjct: 84 APDG-YTFMLSNTAPVSLSPFMLDSPPYDPIKSFTHIVYIGSVPNVFVVHPDVPAKTVPEFIAWVKLQKDPVPYGSGGVGSIGHIVGELFKAEAGINLQHVGYRGSSPMHNDLLGGTIKFAIDTLPQNVQFQKSGKLRLLAVTSTKRASMAPDVPTVLDLQYPTLVAEN 251
BLAST of mRNA_P-wetherbeei_contig57068.1.1 vs. uniprot
Match: A0A4Z0C499_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Ramlibacter rhizophilus TaxID=1781167 RepID=A0A4Z0C499_9BURK) HSP 1 Score: 191 bits (485), Expect = 2.570e-57 Identity = 91/167 (54.49%), Postives = 124/167 (74.25%), Query Frame = 1
Query: 13 DGAHTLFVANSAPISIAPFLFDQLPYDPIKDFSHAAMIGTTPNAFFVSSTIPVETLAQYVEWVKAQGKPVPFGSGGGGSIGHIVGEMFKNELHLQMEHVAYKGSTPMFQDMLGGHLKVGVNTLPEVWEFAKQGRLRVVALTAPTRAKIAPNVPTVVELGYPKLVAEN 513
DG +TL ++N+APISI+PF+ D+ PYDP+K F+H A IG+ PN F V ++P TL + V W+KAQ KPV +GSGG GSIGHIVGE+FK + L MEHV YKGS PM D+LGG L+ V+TL + F K+ +L +A+T+ R+ +APN+P+VVE+G PKL+A+N
Sbjct: 87 DG-YTLLLSNTAPISISPFMMDKAPYDPVKSFTHIAYIGSVPNVFVVHPSVPARTLPELVSWIKAQSKPVNYGSGGVGSIGHIVGEVFKQQYGLNMEHVPYKGSAPMHNDLLGGSLQFAVDTLTQNVPFMKENKLIGIAVTSRARSAMAPNLPSVVEVGAPKLIADN 252
BLAST of mRNA_P-wetherbeei_contig57068.1.1 vs. uniprot
Match: A0A4Q3TG08_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A4Q3TG08_9BURK) HSP 1 Score: 189 bits (479), Expect = 2.000e-56 Identity = 93/169 (55.03%), Postives = 123/169 (72.78%), Query Frame = 1
Query: 7 ANDGAHTLFVANSAPISIAPFLFDQLPYDPIKDFSHAAMIGTTPNAFFVSSTIPVETLAQYVEWVKAQGKPVPFGSGGGGSIGHIVGEMFKNELHLQMEHVAYKGSTPMFQDMLGGHLKVGVNTLPEVWEFAKQGRLRVVALTAPTRAKIAPNVPTVVELGYPKLVAEN 513
A+ +TL ++N+APISI+PF+ D+ PY+P+K FSH A IG+ PN F V +P +T+ + V W+KAQ KPV +GSGG GSIGHIVGE+FK + L+MEHV YKGS PM D+LGG L+ V+TL + F K G+L +A+T+ RA +A VPTVVE G+PKLVAEN
Sbjct: 83 ASADGYTLLLSNTAPISISPFMLDKPPYEPVKGFSHIAYIGSVPNVFVVHPAVPAKTMPELVAWIKAQTKPVNYGSGGVGSIGHIVGEVFKQQYGLKMEHVPYKGSGPMHADLLGGTLQFAVDTLTQNVPFMKDGKLVGIAVTSRERAALATAVPTVVEAGFPKLVAEN 251 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57068.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57068.1.1 >prot_P-wetherbeei_contig57068.1.1 ID=prot_P-wetherbeei_contig57068.1.1|Name=mRNA_P-wetherbeei_contig57068.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=171bp ITANDGAHTLFVANSAPISIAPFLFDQLPYDPIKDFSHAAMIGTTPNAFFback to top mRNA from alignment at P-wetherbeei_contig57068:1..513+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57068.1.1 ID=mRNA_P-wetherbeei_contig57068.1.1|Name=mRNA_P-wetherbeei_contig57068.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig57068:1..513+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57068:1..513+ >mRNA_P-wetherbeei_contig57068.1.1 ID=mRNA_P-wetherbeei_contig57068.1.1|Name=mRNA_P-wetherbeei_contig57068.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig57068:1..513+ (Phaeothamnion wetherbeei SAG_119_79)back to top |