prot_P-wetherbeei_contig56919.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig56919.1.1
Unique Nameprot_P-wetherbeei_contig56919.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length171
Homology
BLAST of mRNA_P-wetherbeei_contig56919.1.1 vs. uniprot
Match: A0A5C7NWT5_9PROT (50S ribosomal protein L4 n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A5C7NWT5_9PROT)

HSP 1 Score: 281 bits (720), Expect = 1.570e-94
Identity = 142/171 (83.04%), Postives = 151/171 (88.30%), Query Frame = 0
Query:    1 ALGEVEIDDAVFADIFGRTVRKDILARAVNWQLAKRRSGNHKTKEIGDISGTTKKPYAQKGTGNARQGSLRSPQFRGGATIFGPVVRSHAHDLPKKVRKLALKNALSAKHKDGKLVVWGETNAGGKTKDLAKQFAKLGWSSVLVIDGPEVNTKFALAARNIPNVDVLPQQG 171
            A GEVEIDDAV+ADIFGR +RKDILARAVNWQLAKRR+G HKTKEIGD+ GTTKKPY QKGTGNARQGSLRSPQFRGGATIFGPV RSHAHDLPKKVRKLALK ALSAK  +GKLV+W   +A GKTKDL+ +  KLGW SVLVIDG EVN KFALAARNIP VDVLPQQG
Sbjct:   12 AAGEVEIDDAVYADIFGREIRKDILARAVNWQLAKRRAGTHKTKEIGDVQGTTKKPYNQKGTGNARQGSLRSPQFRGGATIFGPVPRSHAHDLPKKVRKLALKTALSAKQAEGKLVIWSGADATGKTKDLSAKLDKLGWKSVLVIDGAEVNEKFALAARNIPGVDVLPQQG 182          
BLAST of mRNA_P-wetherbeei_contig56919.1.1 vs. uniprot
Match: A0A4R6WTU2_9PROT (50S ribosomal protein L4 n=1 Tax=Dongia mobilis TaxID=578943 RepID=A0A4R6WTU2_9PROT)

HSP 1 Score: 258 bits (658), Expect = 4.310e-85
Identity = 131/169 (77.51%), Postives = 142/169 (84.02%), Query Frame = 0
Query:    3 GEVEIDDAVFADIFGRTVRKDILARAVNWQLAKRRSGNHKTKEIGDISGTTKKPYAQKGTGNARQGSLRSPQFRGGATIFGPVVRSHAHDLPKKVRKLALKNALSAKHKDGKLVVWGETNAGGKTKDLAKQFAKLGWSSVLVIDGPEVNTKFALAARNIPNVDVLPQQG 171
            GE+E+DD  F DIFGR VRKDILAR VNWQLAKRR+G HKTKEIGD+SGTTKKPY+QKGTG ARQGSLRSPQFRGGATIFGPVVRSHAHDLPKKVR L LK ALSAK K+GKLVV        KTKD+AK+FA LGW SVL+I+G  V   FA AARNIP+VDVLPQQG
Sbjct:   14 GEIELDDTTFNDIFGRPVRKDILARVVNWQLAKRRAGTHKTKEIGDVSGTTKKPYSQKGTGRARQGSLRSPQFRGGATIFGPVVRSHAHDLPKKVRTLGLKTALSAKAKEGKLVVLDGVGPDAKTKDVAKKFAALGWKSVLLIEGKAVTEGFARAARNIPHVDVLPQQG 182          
BLAST of mRNA_P-wetherbeei_contig56919.1.1 vs. uniprot
Match: K9HFU0_9PROT (50S ribosomal protein L4 n=1 Tax=Caenispirillum salinarum AK4 TaxID=1238182 RepID=K9HFU0_9PROT)

HSP 1 Score: 228 bits (580), Expect = 2.860e-73
Identity = 123/170 (72.35%), Postives = 134/170 (78.82%), Query Frame = 0
Query:    3 GEVEIDDAVFADIFGRTVRKDILARAVNWQLAKRRSGNHKTKEIGDISGTTKKPYAQKGTGNARQGSLRSPQFRGGATIFGPVVRSHAHDLPKKVRKLALKNALSAKHKDGKLVVWGE-TNAGGKTKDLAKQFAKLGWSSVLVIDGPEVNTKFALAARNIPNVDVLPQQG 171
            G VE+ +    DIFG  VR D+L R V WQLAKR++G HKTK I +ISGTTKKP+ QKGTG+ARQGS+RSPQFRGGATIFGPVVRSHAHDLPKKVRKL LK ALSAK KDGKLVV    T+  GKTKDL KQ A LGWSS L+IDG  VN  FA AARNI  VDVLPQQG
Sbjct:   14 GSVELAE----DIFGLDVRADLLHRVVRWQLAKRQAGTHKTKGISEISGTTKKPFRQKGTGHARQGSMRSPQFRGGATIFGPVVRSHAHDLPKKVRKLGLKTALSAKAKDGKLVVLDTATSESGKTKDLVKQLAALGWSSALIIDGEAVNDGFARAARNIVGVDVLPQQG 179          
BLAST of mRNA_P-wetherbeei_contig56919.1.1 vs. uniprot
Match: A0A5J6MZ50_9PROT (50S ribosomal protein L4 n=2 Tax=Hypericibacter TaxID=2705399 RepID=A0A5J6MZ50_9PROT)

HSP 1 Score: 228 bits (580), Expect = 2.860e-73
Identity = 118/171 (69.01%), Postives = 134/171 (78.36%), Query Frame = 0
Query:    2 LGEVEIDDAVFADIFGRTVRKDILARAVNWQLAKRRSGNHKTKEIGDISGTTKKPYAQKGTGNARQGSLRSPQFRGGATIFGPVVRSHAHDLPKKVRKLALKNALSAKHKDGKLVVWGETNAG-GKTKDLAKQFAKLGWSSVLVIDGPEVNTKFALAARNIPNVDVLPQQG 171
            +GE+++ D    ++FG  VR+DILARAVNWQLAKRR G HKTK IGD+ GTTKKPY QKGTG+ARQGSLRSPQFRGGA IFGPVVRSH HDLPKKVRKLALK ALS+K  DGKLVV     A   KTK+LA +  K GW SVL+IDGP V+  F  A  NIPN+D+LPQQG
Sbjct:   13 VGEIDLSD----EVFGLPVRRDILARAVNWQLAKRRQGTHKTKTIGDVQGTTKKPYKQKGTGSARQGSLRSPQFRGGAVIFGPVVRSHEHDLPKKVRKLALKTALSSKQADGKLVVVDSLAAAKAKTKELAGKLGKFGWQSVLLIDGPAVDDNFRRATANIPNLDLLPQQG 179          
BLAST of mRNA_P-wetherbeei_contig56919.1.1 vs. uniprot
Match: UPI00115D1337 (50S ribosomal protein L4 n=1 Tax=Telmatospirillum sp. J64-1 TaxID=2502183 RepID=UPI00115D1337)

HSP 1 Score: 226 bits (577), Expect = 8.170e-73
Identity = 118/159 (74.21%), Postives = 131/159 (82.39%), Query Frame = 0
Query:   14 DIFGRTVRKDILARAVNWQLAKRRSGNHKTKEIGDISGTTKKPYAQKGTGNARQGSLRSPQFRGGATIFGPVVRSHAHDLPKKVRKLALKNALSAKHKDGKLVVWGETNAGG-KTKDLAKQFAKLGWSSVLVIDGPEVNTKFALAARNIPNVDVLPQQG 171
            D+FG  VR DIL R VNWQLAKR++G HKTK I +ISGTTKKPY QKGTG ARQGSLRSPQFRGGAT+FGPVVRSHAHDLPKKVRKLALK ALSAK  DGKLV+         KTK+LA +FA LGW+SVLVIDG EVN  FA A++N+P+VDVLPQQG
Sbjct:   21 DVFGLPVRTDILFRMVNWQLAKRQAGTHKTKIISEISGTTKKPYKQKGTGRARQGSLRSPQFRGGATVFGPVVRSHAHDLPKKVRKLALKTALSAKAADGKLVILDAARLDAPKTKELAGRFATLGWNSVLVIDGTEVNINFARASQNLPHVDVLPQQG 179          
BLAST of mRNA_P-wetherbeei_contig56919.1.1 vs. uniprot
Match: S9TH18_MAGFU (50S ribosomal protein L4 n=3 Tax=Magnetospirillum TaxID=13134 RepID=S9TH18_MAGFU)

HSP 1 Score: 226 bits (576), Expect = 1.160e-72
Identity = 125/171 (73.10%), Postives = 136/171 (79.53%), Query Frame = 0
Query:    2 LGEVEIDDAVFADIFGRTVRKDILARAVNWQLAKRRSGNHKTKEIGDISGTTKKPYAQKGTGNARQGSLRSPQFRGGATIFGPVVRSHAHDLPKKVRKLALKNALSAKHKDGKLVVWGETN-AGGKTKDLAKQFAKLGWSSVLVIDGPEVNTKFALAARNIPNVDVLPQQG 171
            +GE+E+ + VF    G  VR DILAR VNWQLAKRRSGNHKTK I +ISGTTKKP+AQKG G ARQGSLRSPQFRGGATIFGPVVRSHAHDLPKKVRKLALK ALSAK  DGKL V    N A  KT++LA +   LGWSSVLVIDG  V+  FALA+RNIP VDVLPQ G
Sbjct:   13 VGEIELAETVF----GLPVRTDILARMVNWQLAKRRSGNHKTKGIKEISGTTKKPFAQKGGGRARQGSLRSPQFRGGATIFGPVVRSHAHDLPKKVRKLALKTALSAKAGDGKLFVLDAANVATPKTRELAARLNALGWSSVLVIDGAAVDDNFALASRNIPYVDVLPQAG 179          
BLAST of mRNA_P-wetherbeei_contig56919.1.1 vs. uniprot
Match: A8TZL5_9PROT (50S ribosomal protein L4 n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A8TZL5_9PROT)

HSP 1 Score: 226 bits (575), Expect = 1.640e-72
Identity = 120/170 (70.59%), Postives = 135/170 (79.41%), Query Frame = 0
Query:    3 GEVEIDDAVFADIFGRTVRKDILARAVNWQLAKRRSGNHKTKEIGDISGTTKKPYAQKGTGNARQGSLRSPQFRGGATIFGPVVRSHAHDLPKKVRKLALKNALSAKHKDGKLVVWGETNAG-GKTKDLAKQFAKLGWSSVLVIDGPEVNTKFALAARNIPNVDVLPQQG 171
            GE+++DD+    IFG   R+DILAR VNWQLAKRRSGNHKTK I +ISGTTKKP+ QKGTG ARQGS+R+ QFRGG T+ GPVVRSHAHDLPKKVRKL LK ALSAK K G+L+V    +    KTK LA +F KLGW SVLVIDGPE+N  FA AARNIP VDVLPQQG
Sbjct:   14 GEIDLDDS----IFGLDPRRDILARVVNWQLAKRRSGNHKTKSISEISGTTKKPFRQKGTGRARQGSIRATQFRGGQTVHGPVVRSHAHDLPKKVRKLGLKCALSAKLKSGQLIVLDAASTDEAKTKLLAAKFEKLGWQSVLVIDGPELNEGFARAARNIPRVDVLPQQG 179          
BLAST of mRNA_P-wetherbeei_contig56919.1.1 vs. uniprot
Match: A0A286FZW3_9PROT (50S ribosomal protein L4 n=1 Tax=Caenispirillum bisanense TaxID=414052 RepID=A0A286FZW3_9PROT)

HSP 1 Score: 225 bits (573), Expect = 3.200e-72
Identity = 119/169 (70.41%), Postives = 134/169 (79.29%), Query Frame = 0
Query:    3 GEVEIDDAVFADIFGRTVRKDILARAVNWQLAKRRSGNHKTKEIGDISGTTKKPYAQKGTGNARQGSLRSPQFRGGATIFGPVVRSHAHDLPKKVRKLALKNALSAKHKDGKLVVWGETNAGGKTKDLAKQFAKLGWSSVLVIDGPEVNTKFALAARNIPNVDVLPQQG 171
            G VE+ +    DIFG  VR D+L R V WQLAKR++G HKTK I +ISGTTKKPY QKGTG+ARQGSLRSPQ+RGGATIFGPVVRSHAHDLPKKVRKL LK ALSAK KDGKLVV        KTK+LA +F  LGWSSVL+IDG +VN +F+ AARNI  +DVLPQQG
Sbjct:   14 GSVELAE----DIFGLDVRGDLLHRVVRWQLAKRQAGTHKTKGISEISGTTKKPYKQKGTGHARQGSLRSPQYRGGATIFGPVVRSHAHDLPKKVRKLGLKTALSAKAKDGKLVVLDTAADVAKTKELAAKFKALGWSSVLIIDGEQVNEQFSRAARNIVGIDVLPQQG 178          
BLAST of mRNA_P-wetherbeei_contig56919.1.1 vs. uniprot
Match: A0A8J3E4S6_9PROT (50S ribosomal protein L4 n=2 Tax=Aliidongia dinghuensis TaxID=1867774 RepID=A0A8J3E4S6_9PROT)

HSP 1 Score: 225 bits (573), Expect = 3.540e-72
Identity = 119/159 (74.84%), Postives = 131/159 (82.39%), Query Frame = 0
Query:   14 DIFGRTVRKDILARAVNWQLAKRRSGNHKTKEIGDISGTTKKPYAQKGTGNARQGSLRSPQFRGGATIFGPVVRSHAHDLPKKVRKLALKNALSAKHKDGKLVVWGETNAGG-KTKDLAKQFAKLGWSSVLVIDGPEVNTKFALAARNIPNVDVLPQQG 171
            +IFG  VRKD+LAR VN+QLAKRR+G HKTK IGDI+GTTKKPY QKGTG ARQGSLRSPQFRGGA IFGPVVRSHAHDL KKVRKLALK ALSAK  +GKL+V         KTK L ++F KLGW+SVL+IDGPEV+  FA AARNIP VDVLPQQG
Sbjct:   23 EIFGLEVRKDLLARMVNYQLAKRRAGTHKTKLIGDIAGTTKKPYKQKGTGRARQGSLRSPQFRGGAVIFGPVVRSHAHDLQKKVRKLALKTALSAKQAEGKLIVLDRAAVETPKTKALVERFEKLGWTSVLIIDGPEVDEGFARAARNIPKVDVLPQQG 181          
BLAST of mRNA_P-wetherbeei_contig56919.1.1 vs. uniprot
Match: RL4_MAGSA (50S ribosomal protein L4 n=6 Tax=Magnetospirillum TaxID=13134 RepID=RL4_MAGSA)

HSP 1 Score: 224 bits (571), Expect = 6.670e-72
Identity = 124/171 (72.51%), Postives = 137/171 (80.12%), Query Frame = 0
Query:    2 LGEVEIDDAVFADIFGRTVRKDILARAVNWQLAKRRSGNHKTKEIGDISGTTKKPYAQKGTGNARQGSLRSPQFRGGATIFGPVVRSHAHDLPKKVRKLALKNALSAKHKDGKLVVWGETNAGG-KTKDLAKQFAKLGWSSVLVIDGPEVNTKFALAARNIPNVDVLPQQG 171
            +GE+E+ D    +IFG  VR DIL RAVNWQLAKR+SGNHKTK I +ISGTTKKP+AQKG G ARQGSLRS QFRGG+TIFGPVVRSHAHDLPKKVRKLALK ALSAK  DGKL+V    +AG  KTKDLA +  KLG SSVL IDG  V+  FALA+RNIP VDVLP QG
Sbjct:   13 VGEIELAD----EIFGVPVRGDILFRAVNWQLAKRQSGNHKTKTISEISGTTKKPFAQKGGGRARQGSLRSAQFRGGSTIFGPVVRSHAHDLPKKVRKLALKTALSAKVADGKLIVVDAASAGSPKTKDLAARLGKLGLSSVLFIDGAAVDGNFALASRNIPYVDVLPTQG 179          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56919.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5C7NWT5_9PROT1.570e-9483.0450S ribosomal protein L4 n=1 Tax=Rhodospirillaceae... [more]
A0A4R6WTU2_9PROT4.310e-8577.5150S ribosomal protein L4 n=1 Tax=Dongia mobilis Ta... [more]
K9HFU0_9PROT2.860e-7372.3550S ribosomal protein L4 n=1 Tax=Caenispirillum sa... [more]
A0A5J6MZ50_9PROT2.860e-7369.0150S ribosomal protein L4 n=2 Tax=Hypericibacter Ta... [more]
UPI00115D13378.170e-7374.2150S ribosomal protein L4 n=1 Tax=Telmatospirillum ... [more]
S9TH18_MAGFU1.160e-7273.1050S ribosomal protein L4 n=3 Tax=Magnetospirillum ... [more]
A8TZL5_9PROT1.640e-7270.5950S ribosomal protein L4 n=2 Tax=Alphaproteobacter... [more]
A0A286FZW3_9PROT3.200e-7270.4150S ribosomal protein L4 n=1 Tax=Caenispirillum bi... [more]
A0A8J3E4S6_9PROT3.540e-7274.8450S ribosomal protein L4 n=2 Tax=Aliidongia dinghu... [more]
RL4_MAGSA6.670e-7272.5150S ribosomal protein L4 n=6 Tax=Magnetospirillum ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023574Ribosomal protein L4 domain superfamilyGENE3D3.40.1370.10coord: 1..171
e-value: 1.1E-53
score: 183.8
IPR023574Ribosomal protein L4 domain superfamilySUPERFAMILY52166Ribosomal protein L4coord: 13..170
IPR002136Ribosomal protein L4/L1ePFAMPF00573Ribosomal_L4coord: 13..169
e-value: 4.2E-52
score: 176.6
IPR01300550S ribosomal protein uL4TIGRFAMTIGR03953TIGR03953coord: 13..170
e-value: 2.3E-57
score: 191.3
IPR01300550S ribosomal protein uL4PANTHERPTHR1074650S RIBOSOMAL PROTEIN L4coord: 3..170
NoneNo IPR availablePANTHERPTHR10746:SF639S RIBOSOMAL PROTEIN L4, MITOCHONDRIALcoord: 3..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig56919contigP-wetherbeei_contig56919:2..514 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig56919.1.1mRNA_P-wetherbeei_contig56919.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig56919 2..514 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig56919.1.1 ID=prot_P-wetherbeei_contig56919.1.1|Name=mRNA_P-wetherbeei_contig56919.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=171bp
ALGEVEIDDAVFADIFGRTVRKDILARAVNWQLAKRRSGNHKTKEIGDIS
GTTKKPYAQKGTGNARQGSLRSPQFRGGATIFGPVVRSHAHDLPKKVRKL
ALKNALSAKHKDGKLVVWGETNAGGKTKDLAKQFAKLGWSSVLVIDGPEV
NTKFALAARNIPNVDVLPQQG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023574Ribosomal_L4_dom_sf
IPR002136Ribosomal_L4/L1e
IPR013005Ribosomal_uL4/L1e