prot_P-wetherbeei_contig565.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig565.3.1
Unique Nameprot_P-wetherbeei_contig565.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length273
Homology
BLAST of mRNA_P-wetherbeei_contig565.3.1 vs. uniprot
Match: D7FVT6_ECTSI (S1-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVT6_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 9.230e-41
Identity = 74/125 (59.20%), Postives = 90/125 (72.00%), Query Frame = 0
Query:   20 MAGSGRKTHYRKQVTDAYLHGLPEPTEGQEIARVCGTRGSNILEVVDCNGEAGLAMLPTKFRKLIWVKRGGYVIVSAATDDYENTAGERGKVRHRVEHILTRDQIRHLRVSGKWPPGFEDADGAA 144
            MAG GR+T YRK VTD YL+  PEP E +EI      RGSNI+E++  NGE  LA+LPT+FRKLIWVKRG Y+I S +  D+E +AGE GKVRHRVEHIL +DQI+HL+    WP   +DA G A
Sbjct:    1 MAGVGRRTLYRKSVTDDYLNSTPEPGENEEIVLAQAPRGSNIIEIMLANGEPSLALLPTRFRKLIWVKRGDYLITSTSAGDFETSAGETGKVRHRVEHILNKDQIKHLKKRELWPA--DDAFGGA 123          
BLAST of mRNA_P-wetherbeei_contig565.3.1 vs. uniprot
Match: A0A7S1GDQ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GDQ2_9STRA)

HSP 1 Score: 139 bits (349), Expect = 8.960e-38
Identity = 67/125 (53.60%), Postives = 88/125 (70.40%), Query Frame = 0
Query:   20 MAGSGRKTHYRKQVTDAYLHGLPEPTEGQEIARVCGTRGSNILEVVDCNGEAGLAMLPTKFRKLIWVKRGGYVIVSAATDDYENTAGERGKVRHRVEHILTRDQIRHLRVSGKWPPGFEDADGAA 144
            MAG  R++ YRK V  + L  + EP EGQ I RV  +RGSN+L+VV   GE GL MLPT++RKL+WVKRG ++IV  A DD+E   G++G VR  V H+L +DQ++HL+  GKWP  F+D DGAA
Sbjct:    1 MAGVKRRSKYRKNVEASVLDEMHEPEEGQIIVRVVASRGSNLLDVVTEAGEGGLCMLPTRYRKLVWVKRGDHLIVDCADDDFETAGGDKGAVRFSVAHVLYKDQVKHLKKIGKWPAAFDD-DGAA 124          
BLAST of mRNA_P-wetherbeei_contig565.3.1 vs. uniprot
Match: A0A835YV91_9STRA (S1-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV91_9STRA)

HSP 1 Score: 140 bits (353), Expect = 1.640e-36
Identity = 77/168 (45.83%), Postives = 96/168 (57.14%), Query Frame = 0
Query:   20 MAGSGRKTHYRKQVTDAYLHGLPEPTEGQEIARVCGTRGSNILEVVDCNGEAGLAMLPTKFRKLIWVKRGGYVIVSAATDDYE-NTA----------------------------------------------GERGKVRHRVEHILTRDQIRHLRVSGKWPPGFEDA 140
            MAG GR+T+YRK V + YL GLPEP EG  +A+  G+RGSN++EV    GE  LAMLPT+FRKLIWVKRG YV+VS +T D E +TA                                              GE GKVRHRVEH+L++DQ++H+R  GKWP GF+ A
Sbjct:    1 MAGVGRRTNYRKSVQEEYLSGLPEPGEGTAVAKALGSRGSNVIEVELQCGEQSLAMLPTRFRKLIWVKRGDYVLVSTSTGDIETHTAAAAAHARYAVQCNAPAYRPAQRGAHASKPALRRRRSYRAVRTSALDGEEGKVRHRVEHVLSKDQVKHIRKIGKWPAGFDAA 168          
BLAST of mRNA_P-wetherbeei_contig565.3.1 vs. uniprot
Match: A0A2D4BRF2_PYTIN (S1-like domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BRF2_PYTIN)

HSP 1 Score: 135 bits (341), Expect = 6.420e-36
Identity = 63/120 (52.50%), Postives = 83/120 (69.17%), Query Frame = 0
Query:   20 MAGSGRKTHYRKQVTDAYLHGLPEPTEGQEIARVCGTRGSNILEVVDCNGEAGLAMLPTKFRKLIWVKRGGYVIVSAATDDYENTAGERGKVRHRVEHILTRDQIRHLRVSGKWPPGFED 139
            M+GSGRK+ YRK VT+  LHG PEP E ++I RV   RG N+ EV D  G   L MLP KFRKLIWVKRG ++IV+++ ++     G++G V   VEHIL +DQI++LR  G WP GF++
Sbjct:    1 MSGSGRKSAYRKGVTNKVLHGNPEPQENEQIVRVIALRGGNLFEVQDAEGATSLTMLPAKFRKLIWVKRGDFLIVASSDNEVSTADGKKGAVTSIVEHILYKDQIKNLRTKGLWPQGFDE 120          
BLAST of mRNA_P-wetherbeei_contig565.3.1 vs. uniprot
Match: A0A4D9CWY1_9STRA (S1-like domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWY1_9STRA)

HSP 1 Score: 130 bits (328), Expect = 2.470e-33
Identity = 67/131 (51.15%), Postives = 88/131 (67.18%), Query Frame = 0
Query:   20 MAGSGRKTHYRKQVTDAYLHGLPEPT--EGQEIARVCGTRGSNILEV---------VDCNGEAGLAMLPTKFRKLIWVKRGGYVIVSAATDDYENTAGERGKVRHRVEHILTRDQIRHLRVSGKWPPGFED 139
            M+G+GRK+ YRK VT+  LH  PEP    G+ +ARV  +RG NIL+V          D NG   LA+LPTKFRKLIWVKRG +VIVS  + D++  AGE+GKV+  VEHIL ++Q++HL+  G WP  F +
Sbjct:    1 MSGAGRKSAYRKSVTEEVLHSFPEPNVAAGERVARVVQSRGGNILQVNVAPDPKSGEDENG-GSLALLPTKFRKLIWVKRGDFVIVSGTSHDFQTAAGEKGKVKFMVEHILYKEQVKHLKDQGMWPAVFSE 130          
BLAST of mRNA_P-wetherbeei_contig565.3.1 vs. uniprot
Match: A0A812LGH3_9DINO (Eif1ad protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812LGH3_9DINO)

HSP 1 Score: 128 bits (321), Expect = 7.260e-33
Identity = 64/128 (50.00%), Postives = 83/128 (64.84%), Query Frame = 0
Query:   20 MAGSGRKTHYRKQVTDAYLHGLPEPTEGQEIARVCGTRGSNILEVVDCNGEAGLAMLPTKFRKLIWVKRGGYVIVSAATDDYENTAGERGKVRHRVEHILTRDQIRHLRVSGKWPPGFEDAD--GAAA 145
            MAG  R+T YRKQV    L     P +GQEI ++  + GSNILEV D  GE    +LPTK+RKLIWVKRG ++IVS   +DY+  +G +G V++ VEHILT   I+HL+  G WP  F+  +  GAAA
Sbjct:    1 MAGVKRRTKYRKQVEADVLDAFHTPEDGQEIVQIVQSHGSNILEVRDAEGENAKCILPTKYRKLIWVKRGDFLIVSKGAEDYDTASGNKGTVKYMVEHILTASSIKHLKKEGLWPATFDTTNPRGAAA 128          
BLAST of mRNA_P-wetherbeei_contig565.3.1 vs. uniprot
Match: H3GIY3_PHYRM (S1-like domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GIY3_PHYRM)

HSP 1 Score: 127 bits (320), Expect = 1.080e-32
Identity = 65/127 (51.18%), Postives = 83/127 (65.35%), Query Frame = 0
Query:   20 MAGSGRKTHYRKQVTDAYLHGLPEPTEGQEIARVCGTRGSNILEVVDCNGEAGLAMLPTKFRKLIWVKRGGYVIVSAATDDYENTA-GERGKVRHRVEHILTRDQIRHLRVSGKWPPGFEDADGAAA 145
            M+G+GRK+ YRK VT   L+G PEP E + I RV   RGSN+ EVVD NG   + MLPTKFRKLIWVKRG ++IVS        TA G++G V   VEHIL +DQI++L++   WP  F++     A
Sbjct:    1 MSGAGRKSAYRKGVTKRVLYGDPEPKENELIVRVVALRGSNLFEVVDANGTKAVTMLPTKFRKLIWVKRGDFLIVSEGDGGETTTAKGKKGAVTSIVEHILYKDQIKNLKLKDLWPEAFDETPAGGA 127          
BLAST of mRNA_P-wetherbeei_contig565.3.1 vs. uniprot
Match: A0A0P1B638_PLAHL (Eukaryotic translation initiation factor 1a n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B638_PLAHL)

HSP 1 Score: 127 bits (319), Expect = 1.180e-32
Identity = 64/122 (52.46%), Postives = 80/122 (65.57%), Query Frame = 0
Query:   20 MAGSGRKTHYRKQVTDAYLHGLPEPTEGQEIARVCGTRGSNILEVVDCNGEAGLAMLPTKFRKLIWVKRGGYVIVSAATDDYENTA-GERGKVRHRVEHILTRDQIRHLRVSGKWPPGFEDA 140
            M+GSGRK+ YRK VT   L+G PEP + + I RV   RG+N+ EVVD +G   + MLPTKFRKLIWVKRG Y+IV         TA G++G V   VEHIL +DQI HL+    WP  F+D+
Sbjct:    1 MSGSGRKSAYRKGVTKRVLYGEPEPKDNESIVRVIALRGTNLFEVVDVSGTKSVTMLPTKFRKLIWVKRGDYLIVGEGDGGETTTATGKKGAVTSIVEHILYKDQIEHLKQKKLWPSAFDDS 122          
BLAST of mRNA_P-wetherbeei_contig565.3.1 vs. uniprot
Match: A0A812VYN2_SYMMI (Eif1ad protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VYN2_SYMMI)

HSP 1 Score: 127 bits (318), Expect = 1.410e-32
Identity = 61/121 (50.41%), Postives = 86/121 (71.07%), Query Frame = 0
Query:   20 MAGSGRKTHYRKQVTDAYLHGLPEPTEGQEIARVCGTRGSNILEVVDCNGEAGL--AMLPTKFRKLIWVKRGGYVIVSAATDDYENTAGERGKVRHRVEHILTRDQIRHLRVSGKWPPGFE 138
            M+GSGRK+HYRK V D++L+G  EP E   I RV G+RG+N+ E+ + +G  GL  AMLP KF+KLIWV+RG +VI ++A DD     GE  KV++ ++HIL+++QI+H+   G WP  FE
Sbjct:    1 MSGSGRKSHYRKSVQDSFLNGFLEPEENDSICRVTGSRGTNLFEL-ELSGGGGLELAMLPNKFKKLIWVRRGDFVIAASAVDDCTTATGEDVKVKYMIKHILSKEQIKHIVDIGIWPEDFE 120          
BLAST of mRNA_P-wetherbeei_contig565.3.1 vs. uniprot
Match: G4YPL5_PHYSP (S1-like domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YPL5_PHYSP)

HSP 1 Score: 125 bits (314), Expect = 8.190e-32
Identity = 64/127 (50.39%), Postives = 82/127 (64.57%), Query Frame = 0
Query:   20 MAGSGRKTHYRKQVTDAYLHGLPEPTEGQEIARVCGTRGSNILEVVDCNGEAGLAMLPTKFRKLIWVKRGGYVIVSAATDDYENTA-GERGKVRHRVEHILTRDQIRHLRVSGKWPPGFEDADGAAA 145
            M+G+GRK+ YRK VT   L+G PEP E + I RV   RGSN+ EVVD  G   + MLPTKFRKLIWVKRG ++IV         TA G++G V   VEHIL +DQI++L+    WP  F+D+  + A
Sbjct:    1 MSGAGRKSAYRKGVTSRVLYGDPEPKENELIVRVTALRGSNLFEVVDAEGAKSVTMLPTKFRKLIWVKRGDFLIVGEGDGGEATTAKGKKGAVTSIVEHILYKDQIKNLKRKDLWPAAFDDSSASTA 127          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig565.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVT6_ECTSI9.230e-4159.20S1-like domain-containing protein n=2 Tax=Ectocarp... [more]
A0A7S1GDQ2_9STRA8.960e-3853.60Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A835YV91_9STRA1.640e-3645.83S1-like domain-containing protein n=1 Tax=Tribonem... [more]
A0A2D4BRF2_PYTIN6.420e-3652.50S1-like domain-containing protein n=1 Tax=Pythium ... [more]
A0A4D9CWY1_9STRA2.470e-3351.15S1-like domain-containing protein n=3 Tax=Monodops... [more]
A0A812LGH3_9DINO7.260e-3350.00Eif1ad protein n=1 Tax=Symbiodinium sp. KB8 TaxID=... [more]
H3GIY3_PHYRM1.080e-3251.18S1-like domain-containing protein n=1 Tax=Phytopht... [more]
A0A0P1B638_PLAHL1.180e-3252.46Eukaryotic translation initiation factor 1a n=1 Ta... [more]
A0A812VYN2_SYMMI1.410e-3250.41Eif1ad protein n=1 Tax=Symbiodinium microadriaticu... [more]
G4YPL5_PHYSP8.190e-3250.39S1-like domain-containing protein n=1 Tax=Phytopht... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 208..228
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 211..230
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..272
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..272
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..172
IPR001253Translation initiation factor 1A (eIF-1A)SMARTSM00652eIF1neu4coord: 43..134
e-value: 5.4E-18
score: 75.8
IPR006196RNA-binding domain, S1, IF1 typePFAMPF01176eIF-1acoord: 47..110
e-value: 1.4E-12
score: 47.2
IPR006196RNA-binding domain, S1, IF1 typePROSITEPS50832S1_IF1_TYPEcoord: 41..116
score: 11.370932
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 18..175
e-value: 1.2E-27
score: 98.1
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 20..165
IPR039294Probable RNA-binding protein EIF1ADPANTHERPTHR21641TRANSLATION INITIATION FACTOR-RELATEDcoord: 26..257

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig565contigP-wetherbeei_contig565:2287..3105 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig565.3.1mRNA_P-wetherbeei_contig565.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig565 2055..3129 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig565.3.1 ID=prot_P-wetherbeei_contig565.3.1|Name=mRNA_P-wetherbeei_contig565.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=273bp
MRSSIFLSLSALLCAGARKMAGSGRKTHYRKQVTDAYLHGLPEPTEGQEI
ARVCGTRGSNILEVVDCNGEAGLAMLPTKFRKLIWVKRGGYVIVSAATDD
YENTAGERGKVRHRVEHILTRDQIRHLRVSGKWPPGFEDADGAAATAAPG
PSAADEDDGSGGDSDGDDDGDGENVAAMAMVVKAGAAKAAAGGGASSGAA
TDGAAGEAGEAEREGEEEEEEEEEESDADEALNSILGPNRNRLAMLQLRQ
ERGDDDDISDDESVEESDGPMS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001253TIF_eIF-1A
IPR006196RNA-binding_domain_S1_IF1
IPR012340NA-bd_OB-fold
IPR039294EIF1AD