prot_P-wetherbeei_contig56167.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig56167.1.1
Unique Name	prot_P-wetherbeei_contig56167.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	116

Homology

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BLAST of mRNA_P-wetherbeei_contig56167.1.1 vs. uniprot
Match: UPI0019BB6980 (C-type cytochrome n=1 Tax=Prolixibacteraceae bacterium TaxID=2053594 RepID=UPI0019BB6980)

HSP 1 Score: 187 bits (474), Expect = 3.220e-59
Identity = 85/101 (84.16%), Postives = 94/101 (93.07%), Query Frame = 0

Query:   16 ATMLLLNPALAEEELRNPFAGDAAAAAEGKRLFLKTGCYACHGHEAEGAVGPDLTDDEWIYKPTDAMIFNTIAKGRRGTVMAPFGDQLAPEEIWKIVEFLR 116
            A +LL +PA AE+EL+NPFAGD  AA EGKRLFLKTGCY+CHGHEAEGAVGPDLTDDEW+YKPTDAMIFNTIAKGRRGTVM+PFGDQL P+EIW+IVEFLR
Sbjct:   15 ALLLLFHPARAEDELKNPFAGDTVAAVEGKRLFLKTGCYSCHGHEAEGAVGPDLTDDEWVYKPTDAMIFNTIAKGRRGTVMSPFGDQLKPDEIWQIVEFLR 115

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BLAST of mRNA_P-wetherbeei_contig56167.1.1 vs. uniprot
Match: A0A2E6QLQ5_9PROT (Cytochrome c domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6QLQ5_9PROT)

HSP 1 Score: 128 bits (322), Expect = 8.850e-36
Identity = 54/97 (55.67%), Postives = 76/97 (78.35%), Query Frame = 0

Query:   20 LLNPALAEEELRNPFAGDAAAAAEGKRLFLKTGCYACHGHEAEGAVGPDLTDDEWIYKPTDAMIFNTIAKGRRGTVMAPFGDQLAPEEIWKIVEFLR 116
            +L+ A A +++ NP+ G+A A AEG+RL+  TGCY+CHG  A+GAVGPDLTDDEW+Y+PTDA +F TIAKGR GT M  + + L+ +EIWK++ ++R
Sbjct:   41 ILDTATAADDVHNPYTGNAEAIAEGQRLWAATGCYSCHGELADGAVGPDLTDDEWVYRPTDATLFKTIAKGRSGTNMVGWSESLSDDEIWKVIAYIR 137

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BLAST of mRNA_P-wetherbeei_contig56167.1.1 vs. uniprot
Match: A0A6N8UV92_9PROT (C-type cytochrome n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6N8UV92_9PROT)

HSP 1 Score: 127 bits (320), Expect = 1.330e-35
Identity = 60/105 (57.14%), Postives = 75/105 (71.43%), Query Frame = 0

Query:   12 ASLCATMLLLNPALAEEELRNPFAGDAAAAAEGKRLFLKTGCYACHGHEAEGAVGPDLTDDEWIYKPTDAMIFNTIAKGRRGTVMAPFGDQLAPEEIWKIVEFLR 116
            A+L AT      A A ++  NPF GD  A AEGKRL+ +TGCYACHG EA GAVGPDLTDD+W+Y+PTDA IF  IAKGR+GT M  +   L  E+IWK++ ++R
Sbjct:   24 AALAATXXXXXXARAADDA-NPFTGDPDAIAEGKRLWAQTGCYACHGKEAGGAVGPDLTDDQWVYRPTDATIFKAIAKGRKGTNMVGWSSSLTDEQIWKVIAYIR 127

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BLAST of mRNA_P-wetherbeei_contig56167.1.1 vs. uniprot
Match: A0A0S8D7P7_9PROT (Cytochrome c domain-containing protein n=1 Tax=Betaproteobacteria bacterium SG8_40 TaxID=1703389 RepID=A0A0S8D7P7_9PROT)

HSP 1 Score: 122 bits (307), Expect = 5.950e-34
Identity = 52/86 (60.47%), Postives = 67/86 (77.91%), Query Frame = 0

Query:   31 RNPFAGDAAAAAEGKRLFLKTGCYACHGHEAEGAVGPDLTDDEWIYKPTDAMIFNTIAKGRRGTVMAPFGDQLAPEEIWKIVEFLR 116
            +NP+ GD  A  EG++L+ KTGCY+CHG  AEG VGP L DDEWIYKPTD  +F TIA+GRRGTVMA +  +L P++IWK+V ++R
Sbjct:   17 KNPYTGDETAIKEGRKLWRKTGCYSCHGGVAEGGVGPSLIDDEWIYKPTDKTLFKTIAEGRRGTVMAGWSKELDPDQIWKVVAYIR 102

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BLAST of mRNA_P-wetherbeei_contig56167.1.1 vs. uniprot
Match: A0A2E9E500_9PROT (Cytochrome c domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E9E500_9PROT)

HSP 1 Score: 111 bits (278), Expect = 3.920e-29
Identity = 56/117 (47.86%), Postives = 73/117 (62.39%), Query Frame = 0

Query:    6 VLRWYAASLCATMLLLNPALAEEEL------RNPFAGDAAAAAEGKRLFLKTGCYACHGHEAEGAVGPDLTDDEWIYKPTDAMIFNTIAKGRRGTVMAPFGDQLAPEEIWKIVEFLR 116
            +LR+  A + A  +    +LAEEE       +N   GD AA A GK  +   GCYACHG +AEG VGP L+DD WIYKPTD M++N IA+GR GT M  +   L P +IW++V F+R
Sbjct:   19 LLRYGVAIVLAVSMAQGLSLAEEEELPENWEKNKLNGDVAAIAAGKAHWKNIGCYACHGRKAEGGVGPSLSDDIWIYKPTDKMVYNAIARGRSGTNMVGWSKDLTPRQIWELVAFIR 135

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BLAST of mRNA_P-wetherbeei_contig56167.1.1 vs. uniprot
Match: A0A836U6I2_9PROT (C-type cytochrome n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A836U6I2_9PROT)

HSP 1 Score: 104 bits (259), Expect = 2.430e-26
Identity = 44/74 (59.46%), Postives = 56/74 (75.68%), Query Frame = 0

Query:   43 EGKRLFLKTGCYACHGHEAEGAVGPDLTDDEWIYKPTDAMIFNTIAKGRRGTVMAPFGDQLAPEEIWKIVEFLR 116
            +GK+L+ KTGCY+CHG  AEG VGP L DD W+YKP D M+F TIAKGR GTVM  +  +L+  EIW+I+ F+R
Sbjct:   55 KGKKLWRKTGCYSCHGGNAEGGVGPSLQDDIWVYKPNDKMLFKTIAKGRSGTVMVAWESELSQTEIWEIIIFIR 128

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BLAST of mRNA_P-wetherbeei_contig56167.1.1 vs. uniprot
Match: A0A2E4I9I1_9PROT (Cytochrome c domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A2E4I9I1_9PROT)

HSP 1 Score: 104 bits (259), Expect = 2.430e-26
Identity = 45/85 (52.94%), Postives = 58/85 (68.24%), Query Frame = 0

Query:   32 NPFAGDAAAAAEGKRLFLKTGCYACHGHEAEGAVGPDLTDDEWIYKPTDAMIFNTIAKGRRGTVMAPFGDQLAPEEIWKIVEFLR 116
            NP  G+  A A GK  +   GCYACHG  AEG VGP L+DD W+YKPTD M++N I++GR GT M  +   L PE+IW++V F+R
Sbjct:   44 NPLNGNPDAIASGKAHWKNIGCYACHGRIAEGGVGPSLSDDIWVYKPTDRMVYNAISRGRSGTNMVGWSKDLTPEQIWELVAFIR 128

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BLAST of mRNA_P-wetherbeei_contig56167.1.1 vs. uniprot
Match: UPI001F35EF86 (cytochrome c n=2 Tax=Noviherbaspirillum pedocola TaxID=2801341 RepID=UPI001F35EF86)

HSP 1 Score: 80.5 bits (197), Expect = 7.580e-17
Identity = 37/89 (41.57%), Postives = 52/89 (58.43%), Query Frame = 0

Query:   28 EELRNPFAGDAAAAAEGKRLFLKTGCYACHGHEAEGAVGPDLTDDEWIYKPTDAMIFNTIAKGRRGTVMAPFGDQLAPEEIWKIVEFLR 116
            + L+NP+ GD  A A+G++LF    C  CH  +  GA+GP L+D+EWIY      IF TI +GR    M  F   L  E +WK+V ++R
Sbjct:   40 QTLKNPYEGDPVAIAQGRQLFTSMNCAGCHAPQGGGAMGPPLSDNEWIYGGEPGQIFMTIMQGRPNG-MPSFASALPEESVWKLVAYVR 127

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BLAST of mRNA_P-wetherbeei_contig56167.1.1 vs. uniprot
Match: A0A2R5F3B8_9PROT (Cytochrome C n=1 Tax=Novimethylophilus kurashikiensis TaxID=1825523 RepID=A0A2R5F3B8_9PROT)

HSP 1 Score: 77.8 bits (190), Expect = 1.240e-15
Identity = 36/89 (40.45%), Postives = 54/89 (60.67%), Query Frame = 0

Query:   28 EELRNPFAGDAAAAAEGKRLFLKTGCYACHGHEAEGAVGPDLTDDEWIYKPTDAMIFNTIAKGRRGTVMAPFGDQLAPEEIWKIVEFLR 116
            ++L+NP+ G+A+AAAEG+ LF    C  CH  +A G +GP L D +WIY      I+ +I +GR    M  F   L P+ +WK+V ++R
Sbjct:   60 DQLKNPYEGNASAAAEGRSLFNAMNCSGCHAKDAGGGMGPPLGDKDWIYGGEPGQIYLSILQGRPNG-MPSFEKALPPDALWKLVTYIR 147

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BLAST of mRNA_P-wetherbeei_contig56167.1.1 vs. uniprot
Match: A0A2V7GA07_9BACT (Cytochrome C n=2 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7GA07_9BACT)

HSP 1 Score: 75.1 bits (183), Expect = 4.080e-15
Identity = 33/85 (38.82%), Postives = 49/85 (57.65%), Query Frame = 0

Query:   32 NPFAGDAAAAAEGKRLFLKTGCYACHGHEAEGAVGPDLTDDEWIYKPTDAMIFNTIAKGRRGTVMAPFGDQLAPEEIWKIVEFLR 116
            N + G   A AEG+ L+LK GC ACHG    G +GP LTDD W +  +D +++  I        M   G+QL  +E+WK++ ++R
Sbjct:   22 NKYNGKPDAVAEGRALYLKYGCSACHGVGGGGGMGPPLTDDVWKFGSSDEVLYKLIKGQIPEATMPKVGEQLTDDEVWKVIAYIR 106

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig56167.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig56167.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
UPI0019BB6980	3.220e-59	84.16	C-type cytochrome n=1 Tax=Prolixibacteraceae bacte...	[more]
A0A2E6QLQ5_9PROT	8.850e-36	55.67	Cytochrome c domain-containing protein n=1 Tax=Rho...	[more]
A0A6N8UV92_9PROT	1.330e-35	57.14	C-type cytochrome n=1 Tax=Rhodospirillales bacteri...	[more]
A0A0S8D7P7_9PROT	5.950e-34	60.47	Cytochrome c domain-containing protein n=1 Tax=Bet...	[more]
A0A2E9E500_9PROT	3.920e-29	47.86	Cytochrome c domain-containing protein n=1 Tax=Rho...	[more]
A0A836U6I2_9PROT	2.430e-26	59.46	C-type cytochrome n=1 Tax=Alphaproteobacteria bact...	[more]
A0A2E4I9I1_9PROT	2.430e-26	52.94	Cytochrome c domain-containing protein n=2 Tax=roo...	[more]
UPI001F35EF86	7.580e-17	41.57	cytochrome c n=2 Tax=Noviherbaspirillum pedocola T...	[more]
A0A2R5F3B8_9PROT	1.240e-15	40.45	Cytochrome C n=1 Tax=Novimethylophilus kurashikien...	[more]
A0A2V7GA07_9BACT	4.080e-15	38.82	Cytochrome C n=2 Tax=Candidatus Rokubacteria bacte...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036909	Cytochrome c-like domain superfamily	GENE3D	1.10.760.10		coord: 24..116 e-value: 1.4E-30 score: 108.2
IPR036909	Cytochrome c-like domain superfamily	SUPERFAMILY	46626	Cytochrome c	coord: 9..116
IPR009056	Cytochrome c-like domain	PFAM	PF13442	Cytochrome_CBB3	coord: 39..115 e-value: 6.3E-16 score: 58.5
IPR009056	Cytochrome c-like domain	PROSITE	PS51007	CYTC	coord: 39..116 score: 11.02567
None	No IPR available	PIRSR	PIRSR036636-51	PIRSR036636-51	coord: 38..76 e-value: 7.0E-4 score: 16.7
None	No IPR available	PIRSR	PIRSR000008-1	PIRSR000008-1	coord: 31..116 e-value: 2.4E-18 score: 64.1
None	No IPR available	PIRSR	PIRSR000006-2	PIRSR000006-2	coord: 38..115 e-value: 5.8E-14 score: 50.0
None	No IPR available	PIRSR	PIRSR617512-3	PIRSR617512-3	coord: 26..115 e-value: 2.1E-7 score: 27.4
None	No IPR available	PIRSR	PIRSR000025-2	PIRSR000025-2	coord: 31..98 e-value: 8.0E-9 score: 33.3
None	No IPR available	PIRSR	PIRSR036636-50	PIRSR036636-50	coord: 38..76 e-value: 7.0E-4 score: 16.7
None	No IPR available	PIRSR	PIRSR000025-1	PIRSR000025-1	coord: 31..98 e-value: 8.0E-9 score: 33.3
None	No IPR available	PIRSR	PIRSR000008-2	PIRSR000008-2	coord: 31..116 e-value: 2.4E-18 score: 64.1
None	No IPR available	PIRSR	PIRSR617512-2	PIRSR617512-2	coord: 26..115 e-value: 2.1E-7 score: 27.4
None	No IPR available	PANTHER	PTHR33751	CBB3-TYPE CYTOCHROME C OXIDASE SUBUNIT FIXP	coord: 37..115
None	No IPR available	PANTHER	PTHR33751:SF1	CBB3-TYPE CYTOCHROME C OXIDASE SUBUNIT FIXP	coord: 37..115

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig56167	contig	P-wetherbeei_contig56167:101..448 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig56167.1.1	mRNA_P-wetherbeei_contig56167.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig56167 101..448 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig56167.1.1 ID=prot_P-wetherbeei_contig56167.1.1|Name=mRNA_P-wetherbeei_contig56167.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=116bp
MPIDSVLRWYAASLCATMLLLNPALAEEELRNPFAGDAAAAAEGKRLFLK
TGCYACHGHEAEGAVGPDLTDDEWIYKPTDAMIFNTIAKGRRGTVMAPFG
DQLAPEEIWKIVEFLR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036909	Cyt_c-like_dom_sf
IPR009056	Cyt_c-like_dom