prot_P-wetherbeei_contig55383.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig55383.1.1
Unique Nameprot_P-wetherbeei_contig55383.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length138
Homology
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BLAST of mRNA_P-wetherbeei_contig55383.1.1 vs. uniprot
Match: UPI001068FE5C (hypothetical protein n=1 Tax=Microvirga pakistanensis TaxID=1682650 RepID=UPI001068FE5C)

HSP 1 Score: 61.2 bits (147), Expect = 5.410e-9
Identity = 40/127 (31.50%), Postives = 67/127 (52.76%), Query Frame = 0 
Query:    6 RNELETARKMWVEEASDQSIRLIGKALADLEAGISQSLQQVLAPFIGKLIPLAAMDELEKILECALKDDFKGSLFLSGPEDLVAGLKTRLEQREIDVIAEVLPG--MELKARGSNFSITTRIKGWID 130
            R EL   R++WVE+ + Q    I  A+ DLE+ +S+   ++LA  I + +   A+ E  K L   L  D    L ++GPEDL+ G++  L  R  D + E +P   +E+     + +I T++  W+D
Sbjct:   32 REELAVQREIWVEQEARQVASQIIDAIDDLESLLSERAARILASVIPEALRQNAITEFNKALSAILAGDVSPLLKVTGPEDLLKGIRDGLALR--DRVVEFVPSDVVEVTLVAGDTTIQTQLGPWVD 156
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BLAST of mRNA_P-wetherbeei_contig55383.1.1 vs. uniprot
Match: A0A4U8YUP2_METTU (Flagellar assembly protein FliH n=2 Tax=Methylocella tundrae TaxID=227605 RepID=A0A4U8YUP2_METTU)

HSP 1 Score: 55.1 bits (131), Expect = 2.000e-6
Identity = 38/123 (30.89%), Postives = 61/123 (49.59%), Query Frame = 0 
Query:   13 RKMWVEEASDQSIRLIGK---ALADLEAGISQSLQQVLAPFIGKLIPLAAMDELEKILECALKDDFKGSLFLSGPEDLVAGLKTRLEQREIDVIAEVLPGMELKARGSNFSITTRIKGWIDGV 132
            R  W +   D+  RL  K   ALA++E  I  S  ++L PF+ +     A+DEL + L+  L       + ++GPEDL+A L+TRL       +    P M+++       I +RI+ WI  +
Sbjct:   89 RDRWTQ---DEGARLGAKMEAALAEIETRIGASAARILRPFLVRQAGRKAIDELAESLKQMLSGSRNPLVEITGPEDLLAALQTRLAGSAACAVWTPGPTMDVRIIADQTLIESRIQAWIQRI 208
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig55383.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
UPI001068FE5C5.410e-931.50hypothetical protein n=1 Tax=Microvirga pakistanen... [more]
A0A4U8YUP2_METTU2.000e-630.89Flagellar assembly protein FliH n=2 Tax=Methylocel... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig55383contigP-wetherbeei_contig55383:2..415 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig55383.1.1mRNA_P-wetherbeei_contig55383.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig55383 2..415 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig55383.1.1 ID=prot_P-wetherbeei_contig55383.1.1|Name=mRNA_P-wetherbeei_contig55383.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=138bp
LRASHRNELETARKMWVEEASDQSIRLIGKALADLEAGISQSLQQVLAPF
IGKLIPLAAMDELEKILECALKDDFKGSLFLSGPEDLVAGLKTRLEQREI
DVIAEVLPGMELKARGSNFSITTRIKGWIDGVHGAGP*
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