prot_P-wetherbeei_contig5413.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5413.2.1
Unique Nameprot_P-wetherbeei_contig5413.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length247
Homology
BLAST of mRNA_P-wetherbeei_contig5413.2.1 vs. uniprot
Match: A0A6H5JKS8_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKS8_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 1.950e-36
Identity = 95/244 (38.93%), Postives = 111/244 (45.49%), Query Frame = 0
Query:   53 VMRVNQLDAGVLDNELHDLLRTQLNRVFSMFQASSVERYKPEVEALLRLLLWRFTVWSRLPTPGMKLQSLRYGD--GRAPQAPFLD------------------------------GALSHGGN----DGSXXXXXXXXXXXXXXXXXXXXXXA-------------TATQRLAFGMLYIGAPWALTRLTRWALACGWDERPDGDWRHAVWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLER 247
            VMRVNQLDAGVLD ELH LL+TQL R  S   A ++ER+KPEV+AL  LL++RFTVW   PTPGM LQ LRY    GR    P                                 GAL HGG     DGS                      A             T  QRL  G+L +G  W   RL R  L  GW     G  R   W  L R E  +R  W++NLLLFL++G Y TP++R
Sbjct:   32 VMRVNQLDAGVLDTELHSLLKTQLGRACSGLPAGTLERFKPEVDALFNLLMFRFTVWVHRPTPGMHLQGLRYRSEGGRTAGPPSATASGGSXXXXXXXXXAGDVSSLASGWEGGDGGALGHGGPSNTADGSSVGTRSPEREGGASSTSTFPGLASTAPLPYWGDAAPTRAQRLVHGLLSVGVQWGFARLRRHGLIHGWGGEDAGRARRVAWHVLGRLETLFRLAWMVNLLLFLKSGKYATPVDR 275          
BLAST of mRNA_P-wetherbeei_contig5413.2.1 vs. uniprot
Match: W7TYI4_9STRA (Peroxin-2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TYI4_9STRA)

HSP 1 Score: 125 bits (313), Expect = 8.240e-30
Identity = 83/224 (37.05%), Postives = 109/224 (48.66%), Query Frame = 0
Query:   53 VMRVNQLDAGVLDNELHDLLRTQLNRVFS--MFQASSVERYKPEVEALLRLLLWRFTVWSRLPTPGMKLQSLRYGDGRAPQAPFLDGALSHGGNDGSXXXXXXXXXXXXXXXXXXXXXXATATQRLAFGMLYIGAPWALTRLTRWALACGW-DE--------------------------RPDGDWRHAVWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLER 247
            VM+VNQ+DA VLD EL DLL+ QL  +F+   F    V++YKPE++ALL  LL+RFT++   PTPGM++Q+LR+ DG A        A S                                +QRL  G L I   W   RL R AL  GW DE                          R  G W+   +RAL RAE+ +R  WL+N L+FLR G+YP+ L+R
Sbjct:   93 VMKVNQVDARVLDTELLDLLQIQLCSMFAPPFFAPGVVDKYKPELKALLDFLLFRFTIFQNEPTPGMRMQNLRFVDGHAIGTSVSSAASS------------------------VDAHAPRVSQRLLLGFLCIAGQWGFARLRRHALVAGWADEVQHPQPLISHTSDAQARGQGERSSGTRGGGQWKRRAYRALTRAESLFRLAWLINFLVFLRVGSYPSLLQR 292          
BLAST of mRNA_P-wetherbeei_contig5413.2.1 vs. uniprot
Match: A0A4D9D9T6_9STRA (Pex2_Pex12 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9T6_9STRA)

HSP 1 Score: 123 bits (308), Expect = 3.340e-29
Identity = 83/229 (36.24%), Postives = 111/229 (48.47%), Query Frame = 0
Query:   53 VMRVNQLDAGVLDNELHDLLRTQLNRVFS--MFQASSVERYKPEVEALLRLLLWRFTVWSRLPTPGMKLQSLRYGDGRAPQAPFLDGALSHGGNDGSXXXXXXXXXXXXXXXXXXXXXXATATQRLAFGMLYIGAPWALTRLTRWALACGW----------------------DERPDGD----------WRHAVWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLER 247
            VM+VNQ+DA VLD EL DLL+ QL  +F+   F    V++YKPE++ALL  LL+RFT++   PTPGM++Q+LR+ DG A        A S                                +QRL  G L I   W+  RL R AL  GW                      D+R  G+          W+   +RAL RAE+ +R  WLLN L+FLR G+YP+ L+R
Sbjct:   93 VMKVNQVDARVLDTELLDLLQIQLCSMFAPPFFAPGVVDKYKPELKALLDFLLFRFTIFQNEPTPGMRMQNLRFVDGHAIGTSVSSVASS------------------------VDAHAPRVSQRLLLGFLCIAGQWSFARLRRHALVAGWADEVQHPQSLIPHTSDAQASNGDDRGQGERSSGTQGGGQWKRRAYRALTRAESLFRLAWLLNFLVFLRVGSYPSLLQR 297          
BLAST of mRNA_P-wetherbeei_contig5413.2.1 vs. uniprot
Match: A0A4P9WGU4_9FUNG (Pex12 amino terminal region-domain-containing protein (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9WGU4_9FUNG)

HSP 1 Score: 114 bits (286), Expect = 8.390e-28
Identity = 63/199 (31.66%), Postives = 112/199 (56.28%), Query Frame = 0
Query:   53 VMRVNQLDAGVLDNELHDLLRTQLNRVFSMFQASSVERYKPEVEALLRLLLWRFTVWSRLPTPGMKLQSLRYGD----GRAPQAPFLDGALSHGGNDGSXXXXXXXXXXXXXXXXXXXXXXATATQRLAFGMLYIGAPWALTRLTRWALACGWDERPDGDWRHAVWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLER 247
            V+RV+QLDA +LD EL  +L+ Q  ++F++F  +  ER++PE  A+L+ +++ F++++   + G++LQ+LRY +    G   +A  +D  L                               T +Q+LA  +L++   W+  R+ R+A    W E P+ +WR+ +WR L++AE AY+A+ ++N L+FL  G Y +PL+R
Sbjct:    3 VLRVSQLDAELLDQELSTMLKDQFLQIFALFSPTVKERFEPEFTAILQYVMYHFSIYATGASYGLQLQNLRYRNESRHGGKREASTIDAPL-------------------------------TRSQKLAHAILHVFGRWSWLRVNRYATTHEWSEHPENNWRNRIWRYLQKAETAYKAISVVNFLVFLYDGRYRSPLDR 170          
BLAST of mRNA_P-wetherbeei_contig5413.2.1 vs. uniprot
Match: C1E8X2_MICCC (RING-type domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E8X2_MICCC)

HSP 1 Score: 114 bits (284), Expect = 3.770e-26
Identity = 75/195 (38.46%), Postives = 100/195 (51.28%), Query Frame = 0
Query:   53 VMRVNQLDAGVLDNELHDLLRTQLNRVFSMFQASSVERYKPEVEALLRLLLWRFTVWSRLPTPGMKLQSLRYGDGRAPQAPFLDGALSHGGNDGSXXXXXXXXXXXXXXXXXXXXXXATATQRLAFGMLYIGAPWALTRLTRWALACGWDERPDGDWRHAVWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLER 247
            V+RV Q+DAG LD+EL  LLR Q NRVF+M    +V R + E+  LL  L++ FTVWS  PTPGM+L +LRY D R P +           + G                        + +QRL +G  ++G  +A ++L R   A  W + P+G WR     A+   EA Y AL L+NLL FL  G Y T  ER
Sbjct:   35 VLRVAQVDAGRLDDELVSLLREQFNRVFAMVFPGAVTRRQSELTLLLDALVFYFTVWSHRPTPGMELMNLRYRDER-PSSSXXXXXXXXXXSTGRTGMEGAKL---------------SVSQRLLYGTAFVGGRFAWSKLRRAIGAGRWADEPEGSWRRVASSAVSALEATYSALALVNLLAFLNRGRYRTLTER 213          
BLAST of mRNA_P-wetherbeei_contig5413.2.1 vs. uniprot
Match: L8HGF4_ACACA (Pex2 / Pex12 amino terminal regioncontaining protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HGF4_ACACA)

HSP 1 Score: 109 bits (272), Expect = 1.380e-24
Identity = 62/195 (31.79%), Postives = 101/195 (51.79%), Query Frame = 0
Query:   53 VMRVNQLDAGVLDNELHDLLRTQLNRVFSMFQASSVERYKPEVEALLRLLLWRFTVWSRLPTPGMKLQSLRYGDGRAPQAPFLDGALSHGGNDGSXXXXXXXXXXXXXXXXXXXXXXATATQRLAFGMLYIGAPWALTRLTRWALACGWDERPDGDWRHAVWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLER 247
            V+RVNQLDA +LDNEL  +++T   ++FS+F+ S ++R+ PE++A L  +++R ++++   T G +LQ+L Y D R          +                               +  Q++ +G+L+IG  WA  RL R A    W ER + D    +W+ L   E A++AL LLN + FL  G Y +P++R
Sbjct:   37 VLRVNQLDASLLDNELTSIIKTSFTKIFSLFRPSLIDRFTPELDAFLYFIMYRLSLYATGSTYGQRLQNLTYRDERQDYLQATQRIIP-----------------------------PSTLQKIMWGVLHIGGAWAWARLNRLASDRTWAERDEDDVYKTLWKVLNYLEVAWKALTLLNFVAFLYNGKYMSPVDR 202          
BLAST of mRNA_P-wetherbeei_contig5413.2.1 vs. uniprot
Match: A0A835Z8Z6_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Z6_9STRA)

HSP 1 Score: 107 bits (267), Expect = 3.120e-24
Identity = 58/103 (56.31%), Postives = 71/103 (68.93%), Query Frame = 0
Query:   21 MDTPGRWLDVVPELAGLDALVKRYSKAGLYPEVMRVNQLDAGVLDNELHDLLRTQLNRVFSMFQASSVERYKPEVEALLRLLLWRFTVWSRLPTPGMKLQSLR 123
            + +P  W   +PELA + AL          P V+RVNQLDAGVLD EL +LL+ QL RVFSM      ERYKPEVEA LRLLLW +TV +++PTPGM+LQ+LR
Sbjct:    6 LPSPTDWAKPIPELAQVQALATATPVPS--PPVLRVNQLDAGVLDGELMELLKMQLARVFSMCSQGFSERYKPEVEAGLRLLLWGYTVMAQVPTPGMRLQNLR 106          
BLAST of mRNA_P-wetherbeei_contig5413.2.1 vs. uniprot
Match: A0A0L0HLU8_SPIPD (Peroxin-2 n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HLU8_SPIPD)

HSP 1 Score: 104 bits (260), Expect = 1.110e-22
Identity = 64/195 (32.82%), Postives = 101/195 (51.79%), Query Frame = 0
Query:   53 VMRVNQLDAGVLDNELHDLLRTQLNRVFSMFQASSVERYKPEVEALLRLLLWRFTVWSRLPTPGMKLQSLRYGDGRAPQAPFLDGALSHGGNDGSXXXXXXXXXXXXXXXXXXXXXXATATQRLAFGMLYIGAPWALTRLTRWALACGWDERPDGDWRHAVWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLER 247
            V+RV+QLDA +LD EL  +++ Q   +FS+F+ +  E+Y+PE  ALL+ L+   +++S   + G++LQ+L+Y +              H G                           +  Q++A  +LYIG  W   R+ R A    W  +P+ DWR+ VW  L++AE  YRAL L+N L+FL  G Y + L+R
Sbjct:   73 VLRVSQLDAELLDAELTSVVKEQFLAIFSLFKPTLKEKYEPEFTALLQYLMCHLSIYSMGASYGLQLQNLKYRN-----------EARHSGR----------------LEVSAIDAPLSKWQKMAHALLYIGGRWGWIRVNRHATTHEWSAQPERDWRNRVWTYLQKAENVYRALSLVNFLVFLYNGRYRSLLDR 240          
BLAST of mRNA_P-wetherbeei_contig5413.2.1 vs. uniprot
Match: F0ZHQ8_DICPU (Peroxin-2 n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZHQ8_DICPU)

HSP 1 Score: 103 bits (258), Expect = 4.380e-22
Identity = 61/195 (31.28%), Postives = 105/195 (53.85%), Query Frame = 0
Query:   53 VMRVNQLDAGVLDNELHDLLRTQLNRVFSMFQASSVERYKPEVEALLRLLLWRFTVWSRLPTPGMKLQSLRYGDGRAPQAPFLDGALSHGGNDGSXXXXXXXXXXXXXXXXXXXXXXATATQRLAFGMLYIGAPWALTRLTRWALACGWDERPDGDWRHAVWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLER 247
            ++RV+QLD+  LD E+ DLLR+Q  ++FS F+ + ++R++PE+ A+L+ ++++ ++++   T G +LQ+L + + +A              N GS                       T  Q+   G++ IG  W  TRL R+++  GW ERP  D+R  +W  +   E++Y+AL +LN L FL  G Y T + R
Sbjct:  114 IVRVSQLDSARLDEEILDLLRSQFMKIFSFFKPNFIQRFQPEINAILKSIIFKLSIFNLGTTYGNQLQNLTFRNEKAFDP-----------NRGSDQLTKL-----------------TLRQKWLSGLINIGGEWLWTRLNRYSIKEGWSERPSTDFRKRLWNLMNFLESSYKALSILNFLAFLYDGKYVTLVNR 280          
BLAST of mRNA_P-wetherbeei_contig5413.2.1 vs. uniprot
Match: A0A162XZ02_PHYB8 (RING-type domain-containing protein (Fragment) n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162XZ02_PHYB8)

HSP 1 Score: 101 bits (251), Expect = 1.480e-21
Identity = 67/221 (30.32%), Postives = 112/221 (50.68%), Query Frame = 0
Query:   27 WLDVVPELAGLDALVKRYSKAGLYPEVMRVNQLDAGVLDNELHDLLRTQLNRVFSMFQASSVERYKPEVEALLRLLLWRFTVWSRLPTPGMKLQSLRYGDGRAPQAPFLDGALSHGGNDGSXXXXXXXXXXXXXXXXXXXXXXATATQRLAFGMLYIGAPWALTRLTRWALACGWDERPDGDWRHAVWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLER 247
            W ++ P L+ +   +     + L  +VMRV+QLD+ +LD+EL  +L+ QL    S+F  +  E  +PE+ ALL L L++ +++    T G +LQ+L+Y +              HGG                           T TQ++ +G+L +G  +A TR +R   + GW E  + D R+ ++R L+  E  ++AL L+N L+FL +G Y T L+R
Sbjct:    6 WKNIQPALSSVRRSMASLQTSSL--KVMRVSQLDSDILDSELFTILKEQLWNALSLFNPAFKESIEPELLALLNLALFKLSIYDTSATYGAQLQNLKYRN-----------EWKHGG----------------PLESIAKDAPLTKTQKIIYGVLSVGGQYAWTRTSRLVTSRGWGELDESDIRNKIYRVLQAGEKYWKALSLVNFLVFLYSGKYRTLLDR 197          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5413.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JKS8_9PHAE1.950e-3638.93RING-type domain-containing protein n=2 Tax=Ectoca... [more]
W7TYI4_9STRA8.240e-3037.05Peroxin-2 n=1 Tax=Nannochloropsis gaditana TaxID=7... [more]
A0A4D9D9T6_9STRA3.340e-2936.24Pex2_Pex12 domain-containing protein n=1 Tax=Nanno... [more]
A0A4P9WGU4_9FUNG8.390e-2831.66Pex12 amino terminal region-domain-containing prot... [more]
C1E8X2_MICCC3.770e-2638.46RING-type domain-containing protein n=1 Tax=Microm... [more]
L8HGF4_ACACA1.380e-2431.79Pex2 / Pex12 amino terminal regioncontaining prote... [more]
A0A835Z8Z6_9STRA3.120e-2456.31RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A0L0HLU8_SPIPD1.110e-2232.82Peroxin-2 n=2 Tax=Spizellomyces TaxID=4815 RepID=A... [more]
F0ZHQ8_DICPU4.380e-2231.28Peroxin-2 n=1 Tax=Dictyostelium purpureum TaxID=57... [more]
A0A162XZ02_PHYB81.480e-2130.32RING-type domain-containing protein (Fragment) n=1... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006845Pex, N-terminalPFAMPF04757Pex2_Pex12coord: 65..247
e-value: 1.2E-24
score: 87.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..160
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 142..156
NoneNo IPR availablePANTHERPTHR23350:SF4PEROXISOME BIOGENESIS FACTOR 2coord: 43..247
NoneNo IPR availablePANTHERPTHR23350PEROXISOME ASSEMBLY PROTEIN 10coord: 43..247

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5413contigP-wetherbeei_contig5413:2784..3857 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5413.2.1mRNA_P-wetherbeei_contig5413.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5413 2784..3857 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5413.2.1 ID=prot_P-wetherbeei_contig5413.2.1|Name=mRNA_P-wetherbeei_contig5413.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=247bp
LSPFHLVPSVFPSFTRQREKMDTPGRWLDVVPELAGLDALVKRYSKAGLY
PEVMRVNQLDAGVLDNELHDLLRTQLNRVFSMFQASSVERYKPEVEALLR
LLLWRFTVWSRLPTPGMKLQSLRYGDGRAPQAPFLDGALSHGGNDGSTSS
GGGVGTSGGGGNGGGFGGGATATQRLAFGMLYIGAPWALTRLTRWALACG
WDERPDGDWRHAVWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLER
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006845Pex_N