mRNA_P-wetherbeei_contig5413.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5413.2.1 vs. uniprot
Match: A0A6H5JKS8_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKS8_9PHAE) HSP 1 Score: 142 bits (359), Expect = 1.950e-36 Identity = 95/244 (38.93%), Postives = 111/244 (45.49%), Query Frame = 1
Query: 157 VMRVNQLDAGVLDNELHDLLRTQLNRVFSMFQASSVERYKPEVEALLRLLLWRFTVWSRLPTPGMKLQSLRYGD--GRAPQAPFLD------------------------------GALSHGGN----DGSXXXXXXXXXXXXXXXXXXXXXXA-------------TATQRLAFGMLYIGAPWALTRLTRWALACGWDERPDGDWRHAVWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLER 741
VMRVNQLDAGVLD ELH LL+TQL R S A ++ER+KPEV+AL LL++RFTVW PTPGM LQ LRY GR P GAL HGG DGS A T QRL G+L +G W RL R L GW G R W L R E +R W++NLLLFL++G Y TP++R
Sbjct: 32 VMRVNQLDAGVLDTELHSLLKTQLGRACSGLPAGTLERFKPEVDALFNLLMFRFTVWVHRPTPGMHLQGLRYRSEGGRTAGPPSATASGGSXXXXXXXXXAGDVSSLASGWEGGDGGALGHGGPSNTADGSSVGTRSPEREGGASSTSTFPGLASTAPLPYWGDAAPTRAQRLVHGLLSVGVQWGFARLRRHGLIHGWGGEDAGRARRVAWHVLGRLETLFRLAWMVNLLLFLKSGKYATPVDR 275
BLAST of mRNA_P-wetherbeei_contig5413.2.1 vs. uniprot
Match: W7TYI4_9STRA (Peroxin-2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TYI4_9STRA) HSP 1 Score: 125 bits (313), Expect = 8.240e-30 Identity = 83/224 (37.05%), Postives = 109/224 (48.66%), Query Frame = 1
Query: 157 VMRVNQLDAGVLDNELHDLLRTQLNRVFS--MFQASSVERYKPEVEALLRLLLWRFTVWSRLPTPGMKLQSLRYGDGRAPQAPFLDGALSHGGNDGSXXXXXXXXXXXXXXXXXXXXXXATATQRLAFGMLYIGAPWALTRLTRWALACGW-DE--------------------------RPDGDWRHAVWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLER 741
VM+VNQ+DA VLD EL DLL+ QL +F+ F V++YKPE++ALL LL+RFT++ PTPGM++Q+LR+ DG A A S +QRL G L I W RL R AL GW DE R G W+ +RAL RAE+ +R WL+N L+FLR G+YP+ L+R
Sbjct: 93 VMKVNQVDARVLDTELLDLLQIQLCSMFAPPFFAPGVVDKYKPELKALLDFLLFRFTIFQNEPTPGMRMQNLRFVDGHAIGTSVSSAASS------------------------VDAHAPRVSQRLLLGFLCIAGQWGFARLRRHALVAGWADEVQHPQPLISHTSDAQARGQGERSSGTRGGGQWKRRAYRALTRAESLFRLAWLINFLVFLRVGSYPSLLQR 292
BLAST of mRNA_P-wetherbeei_contig5413.2.1 vs. uniprot
Match: A0A4D9D9T6_9STRA (Pex2_Pex12 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9T6_9STRA) HSP 1 Score: 123 bits (308), Expect = 3.340e-29 Identity = 83/229 (36.24%), Postives = 111/229 (48.47%), Query Frame = 1
Query: 157 VMRVNQLDAGVLDNELHDLLRTQLNRVFS--MFQASSVERYKPEVEALLRLLLWRFTVWSRLPTPGMKLQSLRYGDGRAPQAPFLDGALSHGGNDGSXXXXXXXXXXXXXXXXXXXXXXATATQRLAFGMLYIGAPWALTRLTRWALACGW----------------------DERPDGD----------WRHAVWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLER 741
VM+VNQ+DA VLD EL DLL+ QL +F+ F V++YKPE++ALL LL+RFT++ PTPGM++Q+LR+ DG A A S +QRL G L I W+ RL R AL GW D+R G+ W+ +RAL RAE+ +R WLLN L+FLR G+YP+ L+R
Sbjct: 93 VMKVNQVDARVLDTELLDLLQIQLCSMFAPPFFAPGVVDKYKPELKALLDFLLFRFTIFQNEPTPGMRMQNLRFVDGHAIGTSVSSVASS------------------------VDAHAPRVSQRLLLGFLCIAGQWSFARLRRHALVAGWADEVQHPQSLIPHTSDAQASNGDDRGQGERSSGTQGGGQWKRRAYRALTRAESLFRLAWLLNFLVFLRVGSYPSLLQR 297
BLAST of mRNA_P-wetherbeei_contig5413.2.1 vs. uniprot
Match: A0A4P9WGU4_9FUNG (Pex12 amino terminal region-domain-containing protein (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9WGU4_9FUNG) HSP 1 Score: 114 bits (286), Expect = 8.390e-28 Identity = 63/199 (31.66%), Postives = 112/199 (56.28%), Query Frame = 1
Query: 157 VMRVNQLDAGVLDNELHDLLRTQLNRVFSMFQASSVERYKPEVEALLRLLLWRFTVWSRLPTPGMKLQSLRYGD----GRAPQAPFLDGALSHGGNDGSXXXXXXXXXXXXXXXXXXXXXXATATQRLAFGMLYIGAPWALTRLTRWALACGWDERPDGDWRHAVWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLER 741
V+RV+QLDA +LD EL +L+ Q ++F++F + ER++PE A+L+ +++ F++++ + G++LQ+LRY + G +A +D L T +Q+LA +L++ W+ R+ R+A W E P+ +WR+ +WR L++AE AY+A+ ++N L+FL G Y +PL+R
Sbjct: 3 VLRVSQLDAELLDQELSTMLKDQFLQIFALFSPTVKERFEPEFTAILQYVMYHFSIYATGASYGLQLQNLRYRNESRHGGKREASTIDAPL-------------------------------TRSQKLAHAILHVFGRWSWLRVNRYATTHEWSEHPENNWRNRIWRYLQKAETAYKAISVVNFLVFLYDGRYRSPLDR 170
BLAST of mRNA_P-wetherbeei_contig5413.2.1 vs. uniprot
Match: C1E8X2_MICCC (RING-type domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E8X2_MICCC) HSP 1 Score: 114 bits (284), Expect = 3.770e-26 Identity = 75/195 (38.46%), Postives = 100/195 (51.28%), Query Frame = 1
Query: 157 VMRVNQLDAGVLDNELHDLLRTQLNRVFSMFQASSVERYKPEVEALLRLLLWRFTVWSRLPTPGMKLQSLRYGDGRAPQAPFLDGALSHGGNDGSXXXXXXXXXXXXXXXXXXXXXXATATQRLAFGMLYIGAPWALTRLTRWALACGWDERPDGDWRHAVWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLER 741
V+RV Q+DAG LD+EL LLR Q NRVF+M +V R + E+ LL L++ FTVWS PTPGM+L +LRY D R P + + G + +QRL +G ++G +A ++L R A W + P+G WR A+ EA Y AL L+NLL FL G Y T ER
Sbjct: 35 VLRVAQVDAGRLDDELVSLLREQFNRVFAMVFPGAVTRRQSELTLLLDALVFYFTVWSHRPTPGMELMNLRYRDER-PSSSXXXXXXXXXXSTGRTGMEGAKL---------------SVSQRLLYGTAFVGGRFAWSKLRRAIGAGRWADEPEGSWRRVASSAVSALEATYSALALVNLLAFLNRGRYRTLTER 213
BLAST of mRNA_P-wetherbeei_contig5413.2.1 vs. uniprot
Match: L8HGF4_ACACA (Pex2 / Pex12 amino terminal regioncontaining protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HGF4_ACACA) HSP 1 Score: 109 bits (272), Expect = 1.380e-24 Identity = 62/195 (31.79%), Postives = 101/195 (51.79%), Query Frame = 1
Query: 157 VMRVNQLDAGVLDNELHDLLRTQLNRVFSMFQASSVERYKPEVEALLRLLLWRFTVWSRLPTPGMKLQSLRYGDGRAPQAPFLDGALSHGGNDGSXXXXXXXXXXXXXXXXXXXXXXATATQRLAFGMLYIGAPWALTRLTRWALACGWDERPDGDWRHAVWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLER 741
V+RVNQLDA +LDNEL +++T ++FS+F+ S ++R+ PE++A L +++R ++++ T G +LQ+L Y D R + + Q++ +G+L+IG WA RL R A W ER + D +W+ L E A++AL LLN + FL G Y +P++R
Sbjct: 37 VLRVNQLDASLLDNELTSIIKTSFTKIFSLFRPSLIDRFTPELDAFLYFIMYRLSLYATGSTYGQRLQNLTYRDERQDYLQATQRIIP-----------------------------PSTLQKIMWGVLHIGGAWAWARLNRLASDRTWAERDEDDVYKTLWKVLNYLEVAWKALTLLNFVAFLYNGKYMSPVDR 202
BLAST of mRNA_P-wetherbeei_contig5413.2.1 vs. uniprot
Match: A0A835Z8Z6_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Z6_9STRA) HSP 1 Score: 107 bits (267), Expect = 3.120e-24 Identity = 58/103 (56.31%), Postives = 71/103 (68.93%), Query Frame = 1
Query: 61 MDTPGRWLDVVPELAGLDALVKRYSKAGLYPEVMRVNQLDAGVLDNELHDLLRTQLNRVFSMFQASSVERYKPEVEALLRLLLWRFTVWSRLPTPGMKLQSLR 369
+ +P W +PELA + AL P V+RVNQLDAGVLD EL +LL+ QL RVFSM ERYKPEVEA LRLLLW +TV +++PTPGM+LQ+LR
Sbjct: 6 LPSPTDWAKPIPELAQVQALATATPVPS--PPVLRVNQLDAGVLDGELMELLKMQLARVFSMCSQGFSERYKPEVEAGLRLLLWGYTVMAQVPTPGMRLQNLR 106
BLAST of mRNA_P-wetherbeei_contig5413.2.1 vs. uniprot
Match: A0A0L0HLU8_SPIPD (Peroxin-2 n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HLU8_SPIPD) HSP 1 Score: 104 bits (260), Expect = 1.110e-22 Identity = 64/195 (32.82%), Postives = 101/195 (51.79%), Query Frame = 1
Query: 157 VMRVNQLDAGVLDNELHDLLRTQLNRVFSMFQASSVERYKPEVEALLRLLLWRFTVWSRLPTPGMKLQSLRYGDGRAPQAPFLDGALSHGGNDGSXXXXXXXXXXXXXXXXXXXXXXATATQRLAFGMLYIGAPWALTRLTRWALACGWDERPDGDWRHAVWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLER 741
V+RV+QLDA +LD EL +++ Q +FS+F+ + E+Y+PE ALL+ L+ +++S + G++LQ+L+Y + H G + Q++A +LYIG W R+ R A W +P+ DWR+ VW L++AE YRAL L+N L+FL G Y + L+R
Sbjct: 73 VLRVSQLDAELLDAELTSVVKEQFLAIFSLFKPTLKEKYEPEFTALLQYLMCHLSIYSMGASYGLQLQNLKYRN-----------EARHSGR----------------LEVSAIDAPLSKWQKMAHALLYIGGRWGWIRVNRHATTHEWSAQPERDWRNRVWTYLQKAENVYRALSLVNFLVFLYNGRYRSLLDR 240
BLAST of mRNA_P-wetherbeei_contig5413.2.1 vs. uniprot
Match: F0ZHQ8_DICPU (Peroxin-2 n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZHQ8_DICPU) HSP 1 Score: 103 bits (258), Expect = 4.380e-22 Identity = 61/195 (31.28%), Postives = 105/195 (53.85%), Query Frame = 1
Query: 157 VMRVNQLDAGVLDNELHDLLRTQLNRVFSMFQASSVERYKPEVEALLRLLLWRFTVWSRLPTPGMKLQSLRYGDGRAPQAPFLDGALSHGGNDGSXXXXXXXXXXXXXXXXXXXXXXATATQRLAFGMLYIGAPWALTRLTRWALACGWDERPDGDWRHAVWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLER 741
++RV+QLD+ LD E+ DLLR+Q ++FS F+ + ++R++PE+ A+L+ ++++ ++++ T G +LQ+L + + +A N GS T Q+ G++ IG W TRL R+++ GW ERP D+R +W + E++Y+AL +LN L FL G Y T + R
Sbjct: 114 IVRVSQLDSARLDEEILDLLRSQFMKIFSFFKPNFIQRFQPEINAILKSIIFKLSIFNLGTTYGNQLQNLTFRNEKAFDP-----------NRGSDQLTKL-----------------TLRQKWLSGLINIGGEWLWTRLNRYSIKEGWSERPSTDFRKRLWNLMNFLESSYKALSILNFLAFLYDGKYVTLVNR 280
BLAST of mRNA_P-wetherbeei_contig5413.2.1 vs. uniprot
Match: A0A162XZ02_PHYB8 (RING-type domain-containing protein (Fragment) n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162XZ02_PHYB8) HSP 1 Score: 101 bits (251), Expect = 1.480e-21 Identity = 67/221 (30.32%), Postives = 112/221 (50.68%), Query Frame = 1
Query: 79 WLDVVPELAGLDALVKRYSKAGLYPEVMRVNQLDAGVLDNELHDLLRTQLNRVFSMFQASSVERYKPEVEALLRLLLWRFTVWSRLPTPGMKLQSLRYGDGRAPQAPFLDGALSHGGNDGSXXXXXXXXXXXXXXXXXXXXXXATATQRLAFGMLYIGAPWALTRLTRWALACGWDERPDGDWRHAVWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLER 741
W ++ P L+ + + + L +VMRV+QLD+ +LD+EL +L+ QL S+F + E +PE+ ALL L L++ +++ T G +LQ+L+Y + HGG T TQ++ +G+L +G +A TR +R + GW E + D R+ ++R L+ E ++AL L+N L+FL +G Y T L+R
Sbjct: 6 WKNIQPALSSVRRSMASLQTSSL--KVMRVSQLDSDILDSELFTILKEQLWNALSLFNPAFKESIEPELLALLNLALFKLSIYDTSATYGAQLQNLKYRN-----------EWKHGG----------------PLESIAKDAPLTKTQKIIYGVLSVGGQYAWTRTSRLVTSRGWGELDESDIRNKIYRVLQAGEKYWKALSLVNFLVFLYSGKYRTLLDR 197 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5413.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5413.2.1 >prot_P-wetherbeei_contig5413.2.1 ID=prot_P-wetherbeei_contig5413.2.1|Name=mRNA_P-wetherbeei_contig5413.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=247bp LSPFHLVPSVFPSFTRQREKMDTPGRWLDVVPELAGLDALVKRYSKAGLYback to top mRNA from alignment at P-wetherbeei_contig5413:2784..3857+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5413.2.1 ID=mRNA_P-wetherbeei_contig5413.2.1|Name=mRNA_P-wetherbeei_contig5413.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1074bp|location=Sequence derived from alignment at P-wetherbeei_contig5413:2784..3857+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5413:2784..3857+ >mRNA_P-wetherbeei_contig5413.2.1 ID=mRNA_P-wetherbeei_contig5413.2.1|Name=mRNA_P-wetherbeei_contig5413.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=741bp|location=Sequence derived from alignment at P-wetherbeei_contig5413:2784..3857+ (Phaeothamnion wetherbeei SAG_119_79)back to top |