prot_P-wetherbeei_contig52534.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig52534.1.1
Unique Nameprot_P-wetherbeei_contig52534.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length178
Homology
BLAST of mRNA_P-wetherbeei_contig52534.1.1 vs. uniprot
Match: UPI0019A2DB1D (ATP-dependent RNA helicase HrpA n=1 Tax=Prolixibacteraceae bacterium TaxID=2053594 RepID=UPI0019A2DB1D)

HSP 1 Score: 328 bits (841), Expect = 5.510e-102
Identity = 160/178 (89.89%), Postives = 170/178 (95.51%), Query Frame = 0
Query:    1 GNIGFKSEEAGIYLGARQIKFVLSPASGLKKKGPKWVMAAELTETTRLYARCVAAIEPEWIERLGTHLAKRSYREPHWSKDSGSVVAYEQVSVYGLVVVQKRRVQYGPIDAKASRELFIRGALVAGHYPGQADFLEYNRSLIEDVQQLEHKSRRHDVLVDDEAIFAFYAERIPDGLYS 178
            GNIGFKS+EAGIYLGARQIKFVLSP S LKKKGPKWVMAAELTETTRLYARCVAAIEPEWIERLG HLAKR+YREPHWSKDSGSVVAYEQVS+YGLVVVQKRRVQYGPI+ K +RELFIRGALVAGHY G+A+FLE+NR LIEDVQQLEHKSRRHDVLVDDEAIFAFYAE IP+G+YS
Sbjct:  613 GNIGFKSDEAGIYLGARQIKFVLSPGSSLKKKGPKWVMAAELTETTRLYARCVAAIEPEWIERLGGHLAKRTYREPHWSKDSGSVVAYEQVSIYGLVVVQKRRVQYGPIEPKEARELFIRGALVAGHYSGRAEFLEHNRGLIEDVQQLEHKSRRHDVLVDDEAIFAFYAEHIPEGIYS 790          
BLAST of mRNA_P-wetherbeei_contig52534.1.1 vs. uniprot
Match: A0A2W5F6E9_9RHOO (ATP-dependent helicase (Fragment) n=1 Tax=Azospira oryzae TaxID=146939 RepID=A0A2W5F6E9_9RHOO)

HSP 1 Score: 236 bits (601), Expect = 1.030e-73
Identity = 112/178 (62.92%), Postives = 141/178 (79.21%), Query Frame = 0
Query:    1 GNIGFKSEEAGIYLGARQIKFVLSPASGLKKKGPKWVMAAELTETTRLYARCVAAIEPEWIERLGTHLAKRSYREPHWSKDSGSVVAYEQVSVYGLVVVQKRRVQYGPIDAKASRELFIRGALVAGHYPGQADFLEYNRSLIEDVQQLEHKSRRHDVLVDDEAIFAFYAERIPDGLYS 178
            GN+G KSEEAG Y GAR IKF++ PASGL++K PKW++AAELTETTRLYARCVAAIEP WIE++  HL KRSY EP W K S  VVA+EQVS++GL+VV +RRV YGPID K SRE+FIR ALVAG +  + +F  +N  L ++++ LEHKSRR DVLVD+E +FAF+  R+P  +Y+
Sbjct:  148 GNVGMKSEEAGEYQGARGIKFLIHPASGLRRKAPKWIVAAELTETTRLYARCVAAIEPAWIEQVAGHLVKRSYFEPRWEKGSAQVVAWEQVSLHGLIVVPRRRVHYGPIDPKTSREIFIRQALVAGDFECKGEFFRHNARLRKEIEALEHKSRRQDVLVDEERMFAFFDARVPPDVYN 325          
BLAST of mRNA_P-wetherbeei_contig52534.1.1 vs. uniprot
Match: A0A5C7EXB8_9PROT (ATP-dependent RNA helicase HrpA n=1 Tax=Pelomicrobium methylotrophicum TaxID=2602750 RepID=A0A5C7EXB8_9PROT)

HSP 1 Score: 233 bits (593), Expect = 1.330e-67
Identity = 110/178 (61.80%), Postives = 140/178 (78.65%), Query Frame = 0
Query:    1 GNIGFKSEEAGIYLGARQIKFVLSPASGLKKKGPKWVMAAELTETTRLYARCVAAIEPEWIERLGTHLAKRSYREPHWSKDSGSVVAYEQVSVYGLVVVQKRRVQYGPIDAKASRELFIRGALVAGHYPGQADFLEYNRSLIEDVQQLEHKSRRHDVLVDDEAIFAFYAERIPDGLYS 178
            GN+G KSEE G Y GAR IKF++ PASGL++K PKW++AAELTETTRLYARCVAAIEP WIE++  HL KRSY EP W K +  VVA+EQVS++GL+VV +RRV YGPID K SRE+FIR ALVAG +  + +F  +N  L ++++ LEHKSRR DVLVD+E +FAF+  R+P  +Y+
Sbjct:  628 GNVGMKSEEPGEYQGARGIKFLIHPASGLRRKAPKWIVAAELTETTRLYARCVAAIEPAWIEQVAGHLVKRSYFEPRWEKGTAQVVAWEQVSLHGLIVVPRRRVHYGPIDPKTSREIFIRQALVAGDFECKGEFFRHNARLRKEIEALEHKSRRQDVLVDEERMFAFFDARVPPDVYN 805          
BLAST of mRNA_P-wetherbeei_contig52534.1.1 vs. uniprot
Match: A0A317GUY9_9PROT (ATP-dependent RNA helicase HrpA (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A317GUY9_9PROT)

HSP 1 Score: 228 bits (581), Expect = 6.770e-67
Identity = 110/178 (61.80%), Postives = 138/178 (77.53%), Query Frame = 0
Query:    1 GNIGFKSEEAGIYLGARQIKFVLSPASGLKKKGPKWVMAAELTETTRLYARCVAAIEPEWIERLGTHLAKRSYREPHWSKDSGSVVAYEQVSVYGLVVVQKRRVQYGPIDAKASRELFIRGALVAGHYPGQADFLEYNRSLIEDVQQLEHKSRRHDVLVDDEAIFAFYAERIPDGLYS 178
            GNIG KS+E GIY GAR IKF + P S L+KK P WV+AAELTETTRLYAR VAAI+P W+ER+G HLAKR+Y + HW K     +A+E+V++YGLVVV KRRV +G ID +A+RE+FIR  LV G Y  +A FL +N+ L E+V++LEHKSRRHDVLVD+  IFAFY ER+P  ++S
Sbjct:  612 GNIGTKSDEPGIYFGARGIKFSIFPGSALRKKAPPWVVAAELTETTRLYARSVAAIDPAWLERIGQHLAKRTYHDVHWEKQPAQAMAFERVTMYGLVVVPKRRVAFGRIDPRAAREIFIRDGLVHGLYDTKAVFLRHNQELREEVEELEHKSRRHDVLVDESRIFAFYDERVPQDVWS 789          
BLAST of mRNA_P-wetherbeei_contig52534.1.1 vs. uniprot
Match: A0A7C2YNH0_9PROT (ATP-dependent RNA helicase HrpA n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2YNH0_9PROT)

HSP 1 Score: 228 bits (581), Expect = 5.440e-66
Identity = 110/176 (62.50%), Postives = 137/176 (77.84%), Query Frame = 0
Query:    1 GNIGFKSEEAGIYLGARQIKFVLSPASGLKKKGPKWVMAAELTETTRLYARCVAAIEPEWIERLGTHLAKRSYREPHWSKDSGSVVAYEQVSVYGLVVVQKRRVQYGPIDAKASRELFIRGALVAGHYPGQADFLEYNRSLIEDVQQLEHKSRRHDVLVDDEAIFAFYAERIPDGL 176
            GNIGF++EE G YLGAR I+F L P SGL+K  PKWVMAAEL ET RLYAR VA IEPEWIE L  HL +R Y +PHW ++   VVA+E+V++YGL +V +RRV YGP++   +RE+FIR ALVAG Y  +A F E+NR L+ +VQ LEHK+RR DVLV++EAIFAFY ERIP+G+
Sbjct:  596 GNIGFRNEE-GEYLGARGIRFALFPGSGLRKSQPKWVMAAELVETARLYARTVARIEPEWIEPLARHLVQRHYHDPHWERERAMVVAFERVTLYGLTIVARRRVHYGPVNPAEAREIFIRQALVAGEYETRATFFEHNRRLVREVQALEHKARRRDVLVNEEAIFAFYDERIPEGI 770          
BLAST of mRNA_P-wetherbeei_contig52534.1.1 vs. uniprot
Match: A0A837WZT7_NITER (HrpA-like helicase n=3 Tax=Nitrosomonas TaxID=914 RepID=A0A837WZT7_NITER)

HSP 1 Score: 225 bits (573), Expect = 6.490e-65
Identity = 104/178 (58.43%), Postives = 135/178 (75.84%), Query Frame = 0
Query:    1 GNIGFKSEEAGIYLGARQIKFVLSPASGLKKKGPKWVMAAELTETTRLYARCVAAIEPEWIERLGTHLAKRSYREPHWSKDSGSVVAYEQVSVYGLVVVQKRRVQYGPIDAKASRELFIRGALVAGHYPGQADFLEYNRSLIEDVQQLEHKSRRHDVLVDDEAIFAFYAERIPDGLYS 178
            GNIGFKS+E G+Y GAR IKF + P S L+KK PKWV+AAEL ETT+LYARC AAI+P W+ER+   L KR Y +PHW K     +A+E+V++YGL ++ KRRV YGPID   +RE+FIR ALVAG Y   A FL++N+ LI+++++LE K RR D+LVD++ IF FYA RIP G+YS
Sbjct:  578 GNIGFKSDEKGVYEGARAIKFSIFPGSSLRKKQPKWVVAAELAETTKLYARCAAAIDPAWLERIAGKLCKRHYFDPHWEKQRAQAMAFERVTLYGLTIIPKRRVAYGPIDPAHAREIFIRQALVAGEYESTAPFLQHNQQLIDEIRELESKVRRQDILVDEQQIFEFYAARIPAGIYS 755          
BLAST of mRNA_P-wetherbeei_contig52534.1.1 vs. uniprot
Match: A0A8H8Z1T0_9PROT (ATP-dependent RNA helicase HrpA n=4 Tax=Nitrosomonas nitrosa TaxID=52442 RepID=A0A8H8Z1T0_9PROT)

HSP 1 Score: 223 bits (567), Expect = 4.240e-64
Identity = 107/177 (60.45%), Postives = 133/177 (75.14%), Query Frame = 0
Query:    1 GNIGFKSEEAGIYLGARQIKFVLSPASGLKKKGPKWVMAAELTETTRLYARCVAAIEPEWIERLGTHLAKRSYREPHWSKDSGSVVAYEQVSVYGLVVVQKRRVQYGPIDAKASRELFIRGALVAGHYPGQADFLEYNRSLIEDVQQLEHKSRRHDVLVDDEAIFAFYAERIPDGLY 177
            GNIGFK+E  G YLGAR IKF + P S LKK  PKW++AAELTETT+LYARC AAIEP W+E +   L K+ Y +PHW K S  VVAYE+V++YGL +V KRRV YG I+ K +RE+FIR ALVAG Y  +A F E+NR LI D+++LEHK+RR DVLVD++ IFAFY   +P  +Y
Sbjct:  582 GNIGFKTENEGEYLGARGIKFSIFPGSTLKKVKPKWIVAAELTETTKLYARCAAAIEPAWLECIAGRLCKKHYFDPHWEKQSAQVVAYERVTLYGLTIVPKRRVSYGRINPKEAREIFIRNALVAGDYVTKAPFFEHNRRLIADIEELEHKARRQDVLVDEQEIFAFYDAIVPAAIY 758          
BLAST of mRNA_P-wetherbeei_contig52534.1.1 vs. uniprot
Match: A0A2M6XVP1_9PROT (ATP-dependent helicase (Fragment) n=1 Tax=Gallionellales bacterium CG08_land_8_20_14_0_20_59_87 TaxID=1974018 RepID=A0A2M6XVP1_9PROT)

HSP 1 Score: 213 bits (541), Expect = 5.770e-64
Identity = 101/178 (56.74%), Postives = 133/178 (74.72%), Query Frame = 0
Query:    1 GNIGFKSEEAGIYLGARQIKFVLSPASGLKKKGPKWVMAAELTETTRLYARCVAAIEPEWIERLGTHLAKRSYREPHWSKDSGSVVAYEQVSVYGLVVVQKRRVQYGPIDAKASRELFIRGALVAGHYPGQADFLEYNRSLIEDVQQLEHKSRRHDVLVDDEAIFAFYAERIPDGLYS 178
            GNIG ++     YLG R+IKF ++P S L KKG KWV+AAE+ ETTRLYARCVA IEPEW+E +G HL KRSY +PHW K +G V A+E+ +++GL++  K+RV YGP++ + SR +FIR ALV G +  QA F  +N+ LI D++ LEHK+RR DVLVDDE IFAFY  RIP G+++
Sbjct:  169 GNIGTRAVNEPHYLGPREIKFFIAPNSVLAKKGAKWVVAAEIVETTRLYARCVARIEPEWLEEVGAHLIKRSYYDPHWEKKAGQVAAWERSTLFGLLINPKKRVHYGPMNPQESRAVFIREALVNGEFNSQAPFFAHNQKLIADIEALEHKARRPDVLVDDELIFAFYDARIPAGIHN 346          
BLAST of mRNA_P-wetherbeei_contig52534.1.1 vs. uniprot
Match: A0A1F3ZWS7_9PROT (ATP-dependent RNA helicase HrpA n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 TaxID=1797482 RepID=A0A1F3ZWS7_9PROT)

HSP 1 Score: 222 bits (565), Expect = 7.840e-64
Identity = 105/178 (58.99%), Postives = 132/178 (74.16%), Query Frame = 0
Query:    1 GNIGFKSEEAGIYLGARQIKFVLSPASGLKKKGPKWVMAAELTETTRLYARCVAAIEPEWIERLGTHLAKRSYREPHWSKDSGSVVAYEQVSVYGLVVVQKRRVQYGPIDAKASRELFIRGALVAGHYPGQADFLEYNRSLIEDVQQLEHKSRRHDVLVDDEAIFAFYAERIPDGLYS 178
            GNIG K+EE G YLGAR I+F + P S L+K  PKWVMAAEL ETTRLYARCVA IEPEWIE +  HL  R Y +PHW K+   VVAYE+V++YGL VV KRRV YGPI+ + +R +FIR  L AG Y  +A F E+NR L+ ++Q+LEHK+RR DVLVD+E +F FY   +P G+++
Sbjct:  573 GNIGCKTEEGGEYLGARGIRFAIFPGSVLRKAQPKWVMAAELAETTRLYARCVAKIEPEWIEPVARHLVNRHYFDPHWEKERALVVAYERVTLYGLTVVAKRRVHYGPINPEEARRIFIRSGLAAGDYVTRAPFFEHNRRLVAEIQELEHKARRRDVLVDEETVFGFYEGIVPAGIHN 750          
BLAST of mRNA_P-wetherbeei_contig52534.1.1 vs. uniprot
Match: A0A1I4PQJ6_9PROT (ATP-dependent helicase HrpA n=7 Tax=Nitrosomonas TaxID=914 RepID=A0A1I4PQJ6_9PROT)

HSP 1 Score: 221 bits (564), Expect = 1.080e-63
Identity = 106/177 (59.89%), Postives = 131/177 (74.01%), Query Frame = 0
Query:    1 GNIGFKSEEAGIYLGARQIKFVLSPASGLKKKGPKWVMAAELTETTRLYARCVAAIEPEWIERLGTHLAKRSYREPHWSKDSGSVVAYEQVSVYGLVVVQKRRVQYGPIDAKASRELFIRGALVAGHYPGQADFLEYNRSLIEDVQQLEHKSRRHDVLVDDEAIFAFYAERIPDGLY 177
            GNIGFKSE  G YLGAR IKF + P S LKK  PKW++AAELTET +LYARCVAAI+P W+E +   L K+ Y +PHW K    V AYE+V++YGL +V KRRV YG I+ K +RE+FIR ALVAG Y  +A F E+NR LIE +++LEHK+RR DVLVD++ IFAFY   IP  +Y
Sbjct:  582 GNIGFKSESEGEYLGARGIKFSIFPGSSLKKTKPKWIVAAELTETAKLYARCVAAIDPSWLENIAGRLCKKHYFDPHWEKQPAQVAAYERVTLYGLTIVPKRRVAYGRINPKEAREIFIRNALVAGEYVTKAPFFEHNRKLIETIEELEHKARRQDVLVDEQEIFAFYDAIIPADIY 758          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52534.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0019A2DB1D5.510e-10289.89ATP-dependent RNA helicase HrpA n=1 Tax=Prolixibac... [more]
A0A2W5F6E9_9RHOO1.030e-7362.92ATP-dependent helicase (Fragment) n=1 Tax=Azospira... [more]
A0A5C7EXB8_9PROT1.330e-6761.80ATP-dependent RNA helicase HrpA n=1 Tax=Pelomicrob... [more]
A0A317GUY9_9PROT6.770e-6761.80ATP-dependent RNA helicase HrpA (Fragment) n=1 Tax... [more]
A0A7C2YNH0_9PROT5.440e-6662.50ATP-dependent RNA helicase HrpA n=1 Tax=Betaproteo... [more]
A0A837WZT7_NITER6.490e-6558.43HrpA-like helicase n=3 Tax=Nitrosomonas TaxID=914 ... [more]
A0A8H8Z1T0_9PROT4.240e-6460.45ATP-dependent RNA helicase HrpA n=4 Tax=Nitrosomon... [more]
A0A2M6XVP1_9PROT5.770e-6456.74ATP-dependent helicase (Fragment) n=1 Tax=Gallione... [more]
A0A1F3ZWS7_9PROT7.840e-6458.99ATP-dependent RNA helicase HrpA n=1 Tax=Betaproteo... [more]
A0A1I4PQJ6_9PROT1.080e-6359.89ATP-dependent helicase HrpA n=7 Tax=Nitrosomonas T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024590RNA helicase HrpA, C-terminalPFAMPF11898DUF3418coord: 82..178
e-value: 3.0E-40
score: 138.5
IPR011709DEAD-box helicase, OB foldPFAMPF07717OB_NTP_bindcoord: 8..67
e-value: 2.2E-12
score: 47.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig52534contigP-wetherbeei_contig52534:9..542 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig52534.1.1mRNA_P-wetherbeei_contig52534.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig52534 9..542 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig52534.1.1 ID=prot_P-wetherbeei_contig52534.1.1|Name=mRNA_P-wetherbeei_contig52534.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=178bp
GNIGFKSEEAGIYLGARQIKFVLSPASGLKKKGPKWVMAAELTETTRLYA
RCVAAIEPEWIERLGTHLAKRSYREPHWSKDSGSVVAYEQVSVYGLVVVQ
KRRVQYGPIDAKASRELFIRGALVAGHYPGQADFLEYNRSLIEDVQQLEH
KSRRHDVLVDDEAIFAFYAERIPDGLYS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024590HrpA_C
IPR011709DEAD-box_helicase_OB_fold