prot_P-wetherbeei_contig5160.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5160.3.1
Unique Nameprot_P-wetherbeei_contig5160.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length144
Homology
BLAST of mRNA_P-wetherbeei_contig5160.3.1 vs. uniprot
Match: A0A835YIY2_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIY2_9STRA)

HSP 1 Score: 186 bits (473), Expect = 2.030e-57
Identity = 99/141 (70.21%), Postives = 112/141 (79.43%), Query Frame = 0
Query:    1 MERPPMLDGSAVGDFGFDPLGMSNQLDPVHTQAAELKHGRVAMLAVVGFLVSQFVHLPAEQFSATNPLKALTMVPLAGHLQIFLLIAFVELQSLKKMYDGKSTDPWEILTQDPAGAKQFAGKSAADKAKSQLQEIKNGRLV 141
            ++RPP L G   GD GFDPLGMS  L+  + QAAELKH RVAMLAVVG LV+QF+HLPA+QFSAT+PL A+  VPLAGHLQIF LIA +E+ SL + YD  STD W  L QDP+GAKQFA KSAADKAKSQLQEIKNGRL 
Sbjct:   52 IQRPPALTGEMPGDVGFDPLGMSENLNLGYMQAAELKHCRVAMLAVVGVLVTQFIHLPADQFSATSPLDAIAKVPLAGHLQIFGLIAGLEMGSLNRTYDD-STDAWGKLIQDPSGAKQFAAKSAADKAKSQLQEIKNGRLA 191          
BLAST of mRNA_P-wetherbeei_contig5160.3.1 vs. uniprot
Match: D8LMR8_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMR8_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 6.100e-42
Identity = 72/141 (51.06%), Postives = 97/141 (68.79%), Query Frame = 0
Query:    1 MERPPMLDGSAVGDFGFDPLGMSNQLDPVHTQAAELKHGRVAMLAVVGFLVSQFVHLPAEQFSATNPLKALTMVPLAGHLQIFLLIAFVELQSLKKMYDGKSTDPWEILTQDPAGAKQFAGKSAADKAKSQLQEIKNGRLV 141
            +E P  LDGS +GDFGFDPLG++  +D    +AAE+KHGRVAMLAVVGFL++Q+VHLP +QF A  PL+ALT VP     Q+F  I   E+ ++ + Y   +TDPWEIL +DP GA  F  KS  ++ + +L E+K+ RL 
Sbjct:   52 LESPATLDGSMIGDFGFDPLGLTENIDIPFARAAEIKHGRVAMLAVVGFLLTQYVHLPGDQFQA-GPLEALTTVPAGAQAQVFTFIGTFEMAAILQTYSEDTTDPWEILLKDPMGADLFYKKSEKEQERLKLSEVKHARLA 191          
BLAST of mRNA_P-wetherbeei_contig5160.3.1 vs. uniprot
Match: W7TX20_9STRA (Light-harvesting protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TX20_9STRA)

HSP 1 Score: 129 bits (323), Expect = 7.680e-35
Identity = 71/142 (50.00%), Postives = 96/142 (67.61%), Query Frame = 0
Query:    1 MERPPMLDGSAVGDFGFDPLGMSNQLDPV-HTQAAELKHGRVAMLAVVGFLVSQFVHLPAEQFSATNPLKALTMVPLAGHLQIFLLIAFVELQSLKKMYDGKSTDPWEILTQDPAGAKQFAGKSAADKAKSQLQEIKNGRLV 141
            +  P  LDGS VGDFGFDP+G+S+Q+  + + +AAELKHGRVAML  +G++V+QFVHLP E ++ +NPLKA+  VPL  H+QIFL IA +EL +L + Y      PW+ L  DP    +  GKS       +L+E+KNGRL 
Sbjct:   44 LAAPKKLDGSLVGDFGFDPMGISDQVANLKYVRAAELKHGRVAMLGFLGWVVTQFVHLPGEIYAESNPLKAIAAVPLISHVQIFLFIAAIELATLDRTYTADK--PWD-LGFDPMNMSK--GKSEQQMKDLELKELKNGRLA 180          
BLAST of mRNA_P-wetherbeei_contig5160.3.1 vs. uniprot
Match: R7QQX2_CHOCR (Light-harvesting complex I polypeptide n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQX2_CHOCR)

HSP 1 Score: 115 bits (287), Expect = 1.970e-29
Identity = 65/141 (46.10%), Postives = 86/141 (60.99%), Query Frame = 0
Query:    1 MERPPMLDGSAVGDFGFDPLGMSNQLDPVHTQAAELKHGRVAMLAVVGFLVSQFVHLPAEQFSATNPLKALTMVPLAGHLQIFLLIAFVELQSLKKMYDGKSTDPWEILTQDPAGAKQFAGKSAADKAKSQLQEIKNGRLV 141
            +E P  LDGS +GD GFDPL +S+ LD  +  A ELK+GRVAMLA VG LV +FVHLP   F+  NP+KA+  VP+ G +QI + I  +EL + KK Y+  +      L  DP G      K   ++ K  L+E+KNGRL 
Sbjct:   42 LEAPSKLDGSRIGDSGFDPLYLSDYLDQDYAAAGELKNGRVAMLATVGMLVQEFVHLPNPMFAEANPIKAIYAVPVEGWVQILVAITIIELATFKKTYESGAD-----LGFDPLG---MGSKGNMEELK--LKELKNGRLA 172          
BLAST of mRNA_P-wetherbeei_contig5160.3.1 vs. uniprot
Match: Q9FEM1_GALSU (Light-harvesting protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=Q9FEM1_GALSU)

HSP 1 Score: 114 bits (284), Expect = 1.120e-28
Identity = 65/144 (45.14%), Postives = 93/144 (64.58%), Query Frame = 0
Query:    1 MERPPMLDGSAVGDFGFDPLGMSNQLDPVHTQAAELKHGRVAMLAVVGFLVSQFVHLPAEQFSATNPLKALTMVPLAGHLQIFLLIAFVEL---QSLKKMYDGKSTDPWEILTQDPAGAKQFAGKSAADKAKSQLQEIKNGRLV 141
            ++ PP LDGS VGD GFDPLG S+ +D  + + +ELKH R+AMLAVVGF+V +F+HLP + FS  +P++A+  VP+AG +QIFLL+A +E+    ++K+   G     +     DP G  +   K A D+    L E+KNGRL 
Sbjct:   61 LKAPPSLDGSMVGDVGFDPLGFSSIIDLRYLRESELKHCRIAMLAVVGFIVQEFIHLPGDVFSNPHPMQAIGQVPVAGWVQIFLLVAILEMIDIAAIKETLQGNREPGYFGF--DPLGLAK--DKQAHDRYL--LSELKNGRLA 198          
BLAST of mRNA_P-wetherbeei_contig5160.3.1 vs. uniprot
Match: Q7XYZ2_GRIJA (Light-harvesting complex I polypeptide (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XYZ2_GRIJA)

HSP 1 Score: 110 bits (276), Expect = 3.900e-28
Identity = 64/142 (45.07%), Postives = 85/142 (59.86%), Query Frame = 0
Query:    1 MERPPMLDGSAVGDFGFDPLGMSNQLDPVHTQAAELKHGRVAMLAVVGFLVSQFVHLPAEQFSATNPLKALTMVPLAGHLQIFLLIAFVELQSLKKMYDGKSTDPWEILTQDPAGAKQFAGKSAADKAKS-QLQEIKNGRLV 141
            +E+P  LDG+ VGD GFDPL +S+ +D  +  AAE+KHGR+ MLA +G LV + VHLP   FS  NPLKA+  VP+ G +QI  +I  VEL S K  Y+  +      L  DP G          DK +  +L+E+KNGRL 
Sbjct:   12 LEKPSKLDGTRVGDTGFDPLYLSDYIDLDYAAAAEIKHGRICMLATLGMLVQEVVHLPNAAFSEPNPLKAIYAVPIEGWVQIITVICLVELASFKATYETGAD-----LGFDPMGL------GTPDKIEELKLKEVKNGRLA 142          
BLAST of mRNA_P-wetherbeei_contig5160.3.1 vs. uniprot
Match: M2XR49_GALSU (Light-harvesting complex protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XR49_GALSU)

HSP 1 Score: 112 bits (279), Expect = 6.270e-28
Identity = 63/144 (43.75%), Postives = 92/144 (63.89%), Query Frame = 0
Query:    1 MERPPMLDGSAVGDFGFDPLGMSNQLDPVHTQAAELKHGRVAMLAVVGFLVSQFVHLPAEQFSATNPLKALTMVPLAGHLQIFLLIAFVEL---QSLKKMYDGKSTDPWEILTQDPAGAKQFAGKSAADKAKSQLQEIKNGRLV 141
            ++ PP LDG+ VGD GFDPLG S  +D  + + +ELKH R+AMLAVVGF+V +F+HLP + FS  +P++A+  VP++G +QIFLL+A +E+    ++K+   G     +     DP G  +   K A D+    L E+KNGRL 
Sbjct:   61 LKAPPSLDGTMVGDVGFDPLGFSTIIDLRYLRESELKHCRIAMLAVVGFIVQEFIHLPGDLFSNPHPMQAIGQVPISGWIQIFLLVAILEMIDIAAIKETLQGNREPGYFGF--DPLGLAK--DKQAHDRYL--LSELKNGRLA 198          
BLAST of mRNA_P-wetherbeei_contig5160.3.1 vs. uniprot
Match: A0A7S2UB14_9STRA (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A7S2UB14_9STRA)

HSP 1 Score: 110 bits (275), Expect = 1.860e-27
Identity = 51/99 (51.52%), Postives = 70/99 (70.71%), Query Frame = 0
Query:    1 MERPPMLDGSAVGDFGFDPLGMSNQLDPVHTQAAELKHGRVAMLAVVGFLVSQFVHLPAEQFSATNPLKALTMVPLAGHLQIFLLIAFVELQSLKKMYD 99
            +E P  LDGS VGD GFDPL +S  ++  +++AAELKHGR+ MLAV+GF+V + VHLP  QF  +NP+ A+  VP+AG  QI   I+F+E+ + K  YD
Sbjct:   53 LEAPDKLDGSMVGDQGFDPLYLSENINLEYSRAAELKHGRICMLAVLGFVVQELVHLPGPQFQESNPILAIGRVPVAGWAQILAFISFIEMATFKSQYD 151          
BLAST of mRNA_P-wetherbeei_contig5160.3.1 vs. uniprot
Match: A0A7S2S2F5_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S2F5_9STRA)

HSP 1 Score: 109 bits (272), Expect = 3.520e-27
Identity = 61/141 (43.26%), Postives = 85/141 (60.28%), Query Frame = 0
Query:    3 RPPMLDGSAVGDFGFDPLGMSN-QLDPVHTQAAELKHGRVAMLAVVGFLVSQF-VHLPAEQFSATNPLKALTMVPLAGHLQIFLLIAFVELQSLKKMYDGKSTDPWEILTQDPAGAKQFAGKSAADKAKSQLQEIKNGRLV 141
            +P  LDGS  GDFGFDP+G+S  Q+D  + + AELKHGR+ MLA+VG ++ +  +H+P  QF+  +P  A+  V   G++QIFL I  +EL +  K Y      P +I      G     GKS AD  K+Q+QEIK+ RL 
Sbjct:   43 KPEKLDGSMAGDFGFDPMGLSEIQVDLKYARWAELKHGRICMLAIVGMIIQEAGIHVPGSQFTEVDPFAAINKVGYVGNMQIFLTIGIIELANFDKYYG--EGQPGDI------GFGSLKGKSDADAEKAQVQEIKHARLA 175          
BLAST of mRNA_P-wetherbeei_contig5160.3.1 vs. uniprot
Match: A0A6U1P673_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1P673_9STRA)

HSP 1 Score: 109 bits (272), Expect = 4.410e-27
Identity = 65/142 (45.77%), Postives = 91/142 (64.08%), Query Frame = 0
Query:    1 MERPPMLDGSAVGDFGFDPLGMSNQL-DPVHTQAAELKHGRVAMLAVVGFLVSQFVHLPAEQFSATNPLKALTMVPLAGHLQIFLLIAFVELQSLKKMYDGKSTDPWEILTQDPAGAKQFAGKSAADKAKSQLQEIKNGRLV 141
            ++ P  LDG+ +GD GFDP+G++ QL D  + +AAELKHGRVAM+AV+GF+V Q+V LP   FS  +P +A+  +PL+ H QIF  IA VEL +  K  +G+  +P +       G+K   GKS       +L+EIKNGRL 
Sbjct:   52 VKTPEKLDGTMIGDAGFDPMGITEQLTDLNYVRAAELKHGRVAMIAVIGFVVQQYVQLPGRAFS--DPFEAVAKLPLSVHAQIFAAIAVVELLTELKTINGEG-EPGDY----GFGSKNLEGKSEDYVNSMKLKEIKNGRLA 186          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5160.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YIY2_9STRA2.030e-5770.21Light harvesting complex protein n=1 Tax=Tribonema... [more]
D8LMR8_ECTSI6.100e-4251.06Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
W7TX20_9STRA7.680e-3550.00Light-harvesting protein n=2 Tax=Monodopsidaceae T... [more]
R7QQX2_CHOCR1.970e-2946.10Light-harvesting complex I polypeptide n=1 Tax=Cho... [more]
Q9FEM1_GALSU1.120e-2845.14Light-harvesting protein n=1 Tax=Galdieria sulphur... [more]
Q7XYZ2_GRIJA3.900e-2845.07Light-harvesting complex I polypeptide (Fragment) ... [more]
M2XR49_GALSU6.270e-2843.75Light-harvesting complex protein n=1 Tax=Galdieria... [more]
A0A7S2UB14_9STRA1.860e-2751.52Hypothetical protein n=2 Tax=Sar TaxID=2698737 Rep... [more]
A0A7S2S2F5_9STRA3.520e-2743.26Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A6U1P673_9STRA4.410e-2745.77Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 4..140
e-value: 2.7E-27
score: 96.3
NoneNo IPR availableGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 1..141
e-value: 2.5E-28
score: 101.3
NoneNo IPR availablePANTHERPTHR21649:SF89CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTICcoord: 6..140
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 2..140
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 6..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5160contigP-wetherbeei_contig5160:2715..3916 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5160.3.1mRNA_P-wetherbeei_contig5160.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5160 2715..3922 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5160.3.1 ID=prot_P-wetherbeei_contig5160.3.1|Name=mRNA_P-wetherbeei_contig5160.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=144bp
MERPPMLDGSAVGDFGFDPLGMSNQLDPVHTQAAELKHGRVAMLAVVGFL
VSQFVHLPAEQFSATNPLKALTMVPLAGHLQIFLLIAFVELQSLKKMYDG
KSTDPWEILTQDPAGAKQFAGKSAADKAKSQLQEIKNGRLVSSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind
IPR001344Chloro_AB-bd_pln