prot_P-wetherbeei_contig2077.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig2077.1.1
Unique Nameprot_P-wetherbeei_contig2077.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length186
Homology
BLAST of mRNA_P-wetherbeei_contig2077.1.1 vs. uniprot
Match: A0A835YST3_9STRA (60S ribosomal protein L36 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YST3_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.160e-17
Identity = 42/48 (87.50%), Postives = 46/48 (95.83%), Query Frame = 0
Query:  137 LGKRVKLVREVVREVAGLMPYEKRILDMIKVGGGSAEKRMYKYAKKRV 184
            LGKRV +VR+VVREVAGLMPYEKRILDMIKVGG SAEKRMYK+AKKR+
Sbjct:   29 LGKRVSVVRQVVREVAGLMPYEKRILDMIKVGGASAEKRMYKFAKKRL 76          
BLAST of mRNA_P-wetherbeei_contig2077.1.1 vs. uniprot
Match: B7ZGM7_9PHAE (60S ribosomal protein L36 (Fragment) n=3 Tax=Phaeophyceae TaxID=2870 RepID=B7ZGM7_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 2.780e-17
Identity = 41/48 (85.42%), Postives = 46/48 (95.83%), Query Frame = 0
Query:  137 LGKRVKLVREVVREVAGLMPYEKRILDMIKVGGGSAEKRMYKYAKKRV 184
            LGKRVK+VREVVREVAGLMPYEKRILDMIK GG SAEKR+YK+AK+R+
Sbjct:   36 LGKRVKMVREVVREVAGLMPYEKRILDMIKTGGASAEKRIYKFAKRRL 83          
BLAST of mRNA_P-wetherbeei_contig2077.1.1 vs. uniprot
Match: M4BXW6_HYAAE (60S ribosomal protein L36 n=21 Tax=Peronosporaceae TaxID=4777 RepID=M4BXW6_HYAAE)

HSP 1 Score: 77.0 bits (188), Expect = 4.390e-15
Identity = 41/59 (69.49%), Postives = 49/59 (83.05%), Query Frame = 0
Query:  126 RGATRLGKQQLLGKRVKLVREVVREVAGLMPYEKRILDMIKVGGGSAEKRMYKYAKKRV 184
            R A+R G+    GK+ KLVRE+VREV GLMPYEKRILDMIK GG SAEKR+YK++KKR+
Sbjct:   24 RPASRKGRA---GKKTKLVREIVREVVGLMPYEKRILDMIKSGGSSAEKRIYKFSKKRL 79          
BLAST of mRNA_P-wetherbeei_contig2077.1.1 vs. uniprot
Match: H3G707_PHYRM (60S ribosomal protein L36 n=4 Tax=Oomycota TaxID=4762 RepID=H3G707_PHYRM)

HSP 1 Score: 75.9 bits (185), Expect = 9.680e-15
Identity = 40/59 (67.80%), Postives = 49/59 (83.05%), Query Frame = 0
Query:  126 RGATRLGKQQLLGKRVKLVREVVREVAGLMPYEKRILDMIKVGGGSAEKRMYKYAKKRV 184
            R A+R G+    GK+ KLVR++VREV GLMPYEKRILDMIK GG SAEKR+YK++KKR+
Sbjct:   21 RPASRKGRA---GKKTKLVRDIVREVVGLMPYEKRILDMIKSGGSSAEKRIYKFSKKRL 76          
BLAST of mRNA_P-wetherbeei_contig2077.1.1 vs. uniprot
Match: A0A5D6XYW5_9STRA (60S ribosomal protein L36 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYW5_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 1.390e-14
Identity = 41/59 (69.49%), Postives = 49/59 (83.05%), Query Frame = 0
Query:  126 RGATRLGKQQLLGKRVKLVREVVREVAGLMPYEKRILDMIKVGGGSAEKRMYKYAKKRV 184
            R A+R G+    GK++KLVR VVREV GLMPYEKRILDMIK GG SAEKR+YK++KKR+
Sbjct:   57 RPASRKGRA---GKKIKLVRSVVREVVGLMPYEKRILDMIKSGGSSAEKRIYKFSKKRL 112          
BLAST of mRNA_P-wetherbeei_contig2077.1.1 vs. uniprot
Match: F0WSK9_9STRA (60S ribosomal protein L36 n=2 Tax=Albugo TaxID=65356 RepID=F0WSK9_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.680e-14
Identity = 36/47 (76.60%), Postives = 43/47 (91.49%), Query Frame = 0
Query:  138 GKRVKLVREVVREVAGLMPYEKRILDMIKVGGGSAEKRMYKYAKKRV 184
            GK+ KLVR++VREV GLMPYEKRILDMIK GG SAEKR+YK++KKR+
Sbjct:   33 GKKTKLVRQIVREVVGLMPYEKRILDMIKSGGSSAEKRIYKFSKKRL 79          
BLAST of mRNA_P-wetherbeei_contig2077.1.1 vs. uniprot
Match: A0A0P1B1R0_PLAHL (60S ribosomal protein L36 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B1R0_PLAHL)

HSP 1 Score: 75.9 bits (185), Expect = 4.360e-14
Identity = 40/59 (67.80%), Postives = 49/59 (83.05%), Query Frame = 0
Query:  126 RGATRLGKQQLLGKRVKLVREVVREVAGLMPYEKRILDMIKVGGGSAEKRMYKYAKKRV 184
            R A+R G+    GK+ KLVR++VREV GLMPYEKRILDMIK GG SAEKR+YK++KKR+
Sbjct:   76 RPASRKGRA---GKKTKLVRDIVREVVGLMPYEKRILDMIKSGGSSAEKRIYKFSKKRL 131          
BLAST of mRNA_P-wetherbeei_contig2077.1.1 vs. uniprot
Match: F0YH51_AURAN (60S ribosomal protein L36 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YH51_AURAN)

HSP 1 Score: 73.9 bits (180), Expect = 5.220e-14
Identity = 37/48 (77.08%), Postives = 42/48 (87.50%), Query Frame = 0
Query:  137 LGKRVKLVREVVREVAGLMPYEKRILDMIKVGGGSAEKRMYKYAKKRV 184
            L  R K+VREVVREVAGL+PYEKRILDMIK GG S+EKRMYK+AK R+
Sbjct:   22 LSARTKVVREVVREVAGLVPYEKRILDMIKTGGASSEKRMYKFAKMRL 69          
BLAST of mRNA_P-wetherbeei_contig2077.1.1 vs. uniprot
Match: K8YZ07_NANGC (60S ribosomal protein L36 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YZ07_NANGC)

HSP 1 Score: 73.9 bits (180), Expect = 6.590e-14
Identity = 36/53 (67.92%), Postives = 46/53 (86.79%), Query Frame = 0
Query:  132 GKQQLLGKRVKLVREVVREVAGLMPYEKRILDMIKVGGGSAEKRMYKYAKKRV 184
            G++  L K+VKLVREVVR+V GLMPYEKRILD+IK GG  AEK++YK+AK+R+
Sbjct:   27 GRKGTLVKKVKLVREVVRDVVGLMPYEKRILDVIKTGGSGAEKKVYKFAKRRL 79          
BLAST of mRNA_P-wetherbeei_contig2077.1.1 vs. uniprot
Match: A0A662XRD4_9STRA (60S ribosomal protein L36 n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XRD4_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.220e-13
Identity = 39/50 (78.00%), Postives = 44/50 (88.00%), Query Frame = 0
Query:  135 QLLGKRVKLVREVVREVAGLMPYEKRILDMIKVGGGSAEKRMYKYAKKRV 184
            Q  GK+ KLVREV+REV GLMPYEKRILDMIK GG SAEKR+YK++KKRV
Sbjct:   82 QRAGKKTKLVREVIREVVGLMPYEKRILDMIKSGGSSAEKRIYKFSKKRV 131          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2077.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YST3_9STRA1.160e-1787.5060S ribosomal protein L36 n=1 Tax=Tribonema minus ... [more]
B7ZGM7_9PHAE2.780e-1785.4260S ribosomal protein L36 (Fragment) n=3 Tax=Phaeo... [more]
M4BXW6_HYAAE4.390e-1569.4960S ribosomal protein L36 n=21 Tax=Peronosporaceae... [more]
H3G707_PHYRM9.680e-1567.8060S ribosomal protein L36 n=4 Tax=Oomycota TaxID=4... [more]
A0A5D6XYW5_9STRA1.390e-1469.4960S ribosomal protein L36 n=1 Tax=Pythium brassicu... [more]
F0WSK9_9STRA1.680e-1476.6060S ribosomal protein L36 n=2 Tax=Albugo TaxID=653... [more]
A0A0P1B1R0_PLAHL4.360e-1467.8060S ribosomal protein L36 n=1 Tax=Plasmopara halst... [more]
F0YH51_AURAN5.220e-1477.0860S ribosomal protein L36 n=1 Tax=Aureococcus anop... [more]
K8YZ07_NANGC6.590e-1467.9260S ribosomal protein L36 n=3 Tax=Monodopsidaceae ... [more]
A0A662XRD4_9STRA1.220e-1378.0060S ribosomal protein L36 n=1 Tax=Nothophytophthor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038097Ribosomal protein L36e domain superfamilyGENE3D1.10.10.176060S ribosomal protein L36coord: 132..185
e-value: 1.4E-15
score: 58.9
IPR000509Ribosomal protein L36ePFAMPF01158Ribosomal_L36ecoord: 133..184
e-value: 2.6E-14
score: 53.2
IPR000509Ribosomal protein L36ePROSITEPS01190RIBOSOMAL_L36Ecoord: 156..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2077contigP-wetherbeei_contig2077:416..973 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2077.1.1mRNA_P-wetherbeei_contig2077.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig2077 241..1478 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig2077.1.1 ID=prot_P-wetherbeei_contig2077.1.1|Name=mRNA_P-wetherbeei_contig2077.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=186bp
MFFARRSIFLFVSGNKLLRALVSRPRRCCLVIKRDCAHFHLSIWHRTSVD
CAGGTCIGVPIVSTFLMTHFPVHLADNKNHAGFLGYPTAPATLPSITDTA
KPLGGGVDRSADQQWNRRLIGSALRRGATRLGKQQLLGKRVKLVREVVRE
VAGLMPYEKRILDMIKVGGGSAEKRMYKYAKKRVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038097L36e_sf
IPR000509Ribosomal_L36e