prot_P-wetherbeei_contig20661.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig20661.1.1
Unique Nameprot_P-wetherbeei_contig20661.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length126
Homology
BLAST of mRNA_P-wetherbeei_contig20661.1.1 vs. uniprot
Match: D7G468_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G468_ECTSI)

HSP 1 Score: 154 bits (389), Expect = 2.170e-45
Identity = 84/126 (66.67%), Postives = 98/126 (77.78%), Query Frame = 0
Query:    1 MAKTPRWYATEDVKQPPKRNKRKPNPPKLRASITPGTVLILLSGRFRGKRVIFLKQLASGCLLVTGPYKVNGVPLRRVNQAYVIATTTKVDLSKVTVPDIDDAYFKRVKTEKKNDEGDGFFATPAK 126
             AK P+WY+ +DVK  PK   +K NP KLR++ITPGT+LILLSGRFRGKRV+FLKQL SG LLVTGPY VNGVP+RRVNQAYVIAT+  VD+SKVT+P  DD+YF R +   K DE D FF   AK
Sbjct:    8 QAKAPKWYSGDDVK--PKAAPQKHNPTKLRSTITPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPMRRVNQAYVIATSMSVDVSKVTIPAADDSYFTREEVATKTDE-DQFFEQGAK 130          
BLAST of mRNA_P-wetherbeei_contig20661.1.1 vs. uniprot
Match: RL6_MESCR (60S ribosomal protein L6 n=2 Tax=Caryophyllales TaxID=3524 RepID=RL6_MESCR)

HSP 1 Score: 155 bits (391), Expect = 5.420e-45
Identity = 84/121 (69.42%), Postives = 100/121 (82.64%), Query Frame = 0
Query:    1 MAKTPRWYATEDVKQPPKRNKRKPNPPKLRASITPGTVLILLSGRFRGKRVIFLKQLASGCLLVTGPYKVNGVPLRRVNQAYVIATTTKVDLSKVTVPDIDDAYFKRVKTEKKNDEGDGFF 121
            + K P++Y  +DVK+P   NKRKP P KLRASITPGTVLI+L+GRF+GKRV+FLKQL+SG LLVTGP+KVNGVPLRRVNQAYVIAT+TKVD+S V V   DD YF + K EKKN +G+G F
Sbjct:   59 VEKPPKFYPADDVKKP-LINKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFKVNGVPLRRVNQAYVIATSTKVDISGVNVEKFDDKYFGK-KAEKKNKKGEGEF 177          
BLAST of mRNA_P-wetherbeei_contig20661.1.1 vs. uniprot
Match: A0A6I9U9H1_SESIN (60S ribosomal protein L6 n=2 Tax=Lamiales TaxID=4143 RepID=A0A6I9U9H1_SESIN)

HSP 1 Score: 153 bits (386), Expect = 2.680e-44
Identity = 84/121 (69.42%), Postives = 99/121 (81.82%), Query Frame = 0
Query:    3 KTPRWYATEDVKQPPKRNKRKPNPPKLRASITPGTVLILLSGRFRGKRVIFLKQLASGCLLVTGPYKVNGVPLRRVNQAYVIATTTKVDLSKVTVPDIDDAYF-KRVKTEKKNDEGDGFFA 122
            K P++Y  +DVK+P   NKRKP P KLRASITPGTVLI+LSGRF+GKRV+FLKQL+SG LLVTGPYK+NGVPLRRVNQAYVIAT+TKVD+S V V   DD YF K+V+ +KK  E + F A
Sbjct:   56 KPPKFYPADDVKKPLS-NKRKPKPTKLRASITPGTVLIILSGRFKGKRVVFLKQLSSGLLLVTGPYKINGVPLRRVNQAYVIATSTKVDISGVNVEKFDDKYFAKQVEKKKKKGENEFFEA 175          
BLAST of mRNA_P-wetherbeei_contig20661.1.1 vs. uniprot
Match: A0A1Y1Y1J0_9FUNG (60S ribosomal protein L6 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y1J0_9FUNG)

HSP 1 Score: 153 bits (386), Expect = 3.450e-44
Identity = 84/122 (68.85%), Postives = 97/122 (79.51%), Query Frame = 0
Query:    1 MAKTPRWYATEDVKQPPKRNKRKPNPPKLRASITPGTVLILLSGRFRGKRVIFLKQLASGCLLVTGPYKVNGVPLRRVNQAYVIATTTKVDLSKVTVPD-IDDAYFKRVKTEKKNDEGDGFF 121
            + K  RWY  EDV QP K++++   P KLR SITPGTVL+LL+GRFRGKRV+FLKQLASG LLVTGPYKVNGVPLRRVNQAYVIAT+TKVDLS V V +  DDAYFK+ KT K +   + FF
Sbjct:   63 LNKASRWYPAEDVAQP-KQSRKTAKPTKLRTSITPGTVLVLLAGRFRGKRVVFLKQLASGLLLVTGPYKVNGVPLRRVNQAYVIATSTKVDLSNVKVDEKFDDAYFKKEKTAKASKTEEEFF 183          
BLAST of mRNA_P-wetherbeei_contig20661.1.1 vs. uniprot
Match: UPI00053C6628 (60S ribosomal protein L6-1-like n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C6628)

HSP 1 Score: 152 bits (385), Expect = 4.130e-44
Identity = 81/119 (68.07%), Postives = 98/119 (82.35%), Query Frame = 0
Query:    3 KTPRWYATEDVKQPPKRNKRKPNPPKLRASITPGTVLILLSGRFRGKRVIFLKQLASGCLLVTGPYKVNGVPLRRVNQAYVIATTTKVDLSKVTVPDIDDAYFKRVKTEKKNDEGDGFF 121
            KTP++Y  EDVK+P   NKRKP P KLRASITPGTVLI+L+GRF+GKRV+FLKQL+SG LLVTGP+K+NGVPLRRVNQ+YVI T+TKVD+S + V   DD YF +V  EKK  +G+G F
Sbjct:   59 KTPKFYPAEDVKKPLV-NKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDISGINVEKFDDKYFAKV-AEKKKKKGEGEF 175          
BLAST of mRNA_P-wetherbeei_contig20661.1.1 vs. uniprot
Match: A0A7J9BD88_GOSGO (60S ribosomal protein L6 n=2 Tax=Gossypium TaxID=3633 RepID=A0A7J9BD88_GOSGO)

HSP 1 Score: 150 bits (380), Expect = 5.350e-44
Identity = 84/121 (69.42%), Postives = 97/121 (80.17%), Query Frame = 0
Query:    3 KTPRWYATEDVKQPPKRNKRKPNPPKLRASITPGTVLILLSGRFRGKRVIFLKQLASGCLLVTGPYKVNGVPLRRVNQAYVIATTTKVDLSKVTVPDIDDAYF-KRVKTEKKNDEGDGFFA 122
            K P++Y  EDVK+P   NKRKP P KLRASITPGTVLILL+GRF GKRV+FLKQL SG LLVTGP+K+NGVPLRRVNQ+YVIAT+TKVD+S V+V   DD YF K V  +KK  EG+ F A
Sbjct:    8 KPPKFYPAEDVKKP-LLNKRKPKPTKLRASITPGTVLILLAGRFMGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVSVEKFDDKYFAKEVDKKKKKSEGEFFEA 127          
BLAST of mRNA_P-wetherbeei_contig20661.1.1 vs. uniprot
Match: A0A7N2LCT9_QUELO (60S ribosomal protein L6 n=3 Tax=Fagaceae TaxID=3503 RepID=A0A7N2LCT9_QUELO)

HSP 1 Score: 152 bits (384), Expect = 6.020e-44
Identity = 84/122 (68.85%), Postives = 99/122 (81.15%), Query Frame = 0
Query:    2 AKTPRWYATEDVKQPPKRNKRKPNPPKLRASITPGTVLILLSGRFRGKRVIFLKQLASGCLLVTGPYKVNGVPLRRVNQAYVIATTTKVDLSKVTVPDIDDAYF-KRVKTEKKNDEGDGFFA 122
            AK P++Y  +DVK+P   NKRKP P KLRASITPGTVLI+LSGRF GKRV+FLKQL+SG LLVTGP+K+NGVPLRRVNQ+YVIAT+TKVD+S V V   DD YF K V+ +KK  EG+ F A
Sbjct:   59 AKAPKFYPADDVKKPLV-NKRKPKPTKLRASITPGTVLIILSGRFMGKRVVFLKQLSSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNVEKFDDKYFAKEVQKKKKKGEGEFFEA 179          
BLAST of mRNA_P-wetherbeei_contig20661.1.1 vs. uniprot
Match: A0A835YT51_9STRA (60S ribosomal protein L6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT51_9STRA)

HSP 1 Score: 150 bits (380), Expect = 6.030e-44
Identity = 83/123 (67.48%), Postives = 95/123 (77.24%), Query Frame = 0
Query:    6 RWYATEDVKQPPKRNKRKP--NPPKLRASITPGTVLILLSGRFRGKRVIFLKQLASGCLLVTGPYKVNGVPLRRVNQAYVIATTTKVDLSKVTVPDIDDAYFKRVKTEKKNDEGDGFFATPAK 126
            RWY  +D+K P K   ++    P KLR+SITPGTV +LLSGRFRGKRV+FLKQ+ASG LLVTGPYKVNGVPLRRVNQAYVIAT+TK+D+SKV V  IDDAYF R    KK  E D FFA  +K
Sbjct:   14 RWYPADDIKAPRKSKAKRSVHKPTKLRSSITPGTVCVLLSGRFRGKRVVFLKQMASGTLLVTGPYKVNGVPLRRVNQAYVIATSTKLDVSKVDVSAIDDAYFARAPEAKKTAE-DAFFAQASK 135          
BLAST of mRNA_P-wetherbeei_contig20661.1.1 vs. uniprot
Match: A0A2P2LJA9_RHIMU (60S ribosomal protein L6 n=2 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2LJA9_RHIMU)

HSP 1 Score: 152 bits (384), Expect = 6.370e-44
Identity = 83/121 (68.60%), Postives = 100/121 (82.64%), Query Frame = 0
Query:    3 KTPRWYATEDVKQPPKRNKRKPNPPKLRASITPGTVLILLSGRFRGKRVIFLKQLASGCLLVTGPYKVNGVPLRRVNQAYVIATTTKVDLSKVTVPDIDDAYF-KRVKTEKKNDEGDGFFA 122
            K P++Y  EDVK+P   NKRKP P KLRASITPGTVLI+L+GRF+GKRV+FLKQL+SG LLVTGP+K+NGVPLRRVNQAYVIAT+TKVD+S V V   DD YF K+V+ +KK  +G+ F A
Sbjct:   62 KPPKFYPAEDVKKPLP-NKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFKINGVPLRRVNQAYVIATSTKVDISGVNVDKFDDKYFAKQVEKKKKKGQGEFFEA 181          
BLAST of mRNA_P-wetherbeei_contig20661.1.1 vs. uniprot
Match: A0A0D2NRP6_GOSRA (60S ribosomal protein L6 n=1 Tax=Gossypium raimondii TaxID=29730 RepID=A0A0D2NRP6_GOSRA)

HSP 1 Score: 150 bits (379), Expect = 8.300e-44
Identity = 84/121 (69.42%), Postives = 96/121 (79.34%), Query Frame = 0
Query:    3 KTPRWYATEDVKQPPKRNKRKPNPPKLRASITPGTVLILLSGRFRGKRVIFLKQLASGCLLVTGPYKVNGVPLRRVNQAYVIATTTKVDLSKVTVPDIDDAYF-KRVKTEKKNDEGDGFFA 122
            K P++Y  EDVK+P   NKRKP P KLRASITPGTVLILL+GRF GKRV+FLKQL SG LLVTGP+K+NGVPLRRVNQ+YVIAT+TKVD+S V V   DD YF K V+  KK  EG+ F A
Sbjct:   60 KPPKFYPAEDVKKP-LLNKRKPKPTKLRASITPGTVLILLAGRFMGKRVVFLKQLTSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVIVDKFDDKYFAKEVEKRKKKTEGEFFEA 179          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20661.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G468_ECTSI2.170e-4566.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
RL6_MESCR5.420e-4569.4260S ribosomal protein L6 n=2 Tax=Caryophyllales Ta... [more]
A0A6I9U9H1_SESIN2.680e-4469.4260S ribosomal protein L6 n=2 Tax=Lamiales TaxID=41... [more]
A0A1Y1Y1J0_9FUNG3.450e-4468.8560S ribosomal protein L6 n=1 Tax=Basidiobolus meri... [more]
UPI00053C66284.130e-4468.0760S ribosomal protein L6-1-like n=2 Tax=Tarenaya h... [more]
A0A7J9BD88_GOSGO5.350e-4469.4260S ribosomal protein L6 n=2 Tax=Gossypium TaxID=3... [more]
A0A7N2LCT9_QUELO6.020e-4468.8560S ribosomal protein L6 n=3 Tax=Fagaceae TaxID=35... [more]
A0A835YT51_9STRA6.030e-4467.4860S ribosomal protein L6 n=1 Tax=Tribonema minus T... [more]
A0A2P2LJA9_RHIMU6.370e-4468.6060S ribosomal protein L6 n=2 Tax=Rhizophora mucron... [more]
A0A0D2NRP6_GOSRA8.300e-4469.4260S ribosomal protein L6 n=1 Tax=Gossypium raimond... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 31..114
e-value: 1.2E-15
score: 59.3
IPR00091560S ribosomal protein L6EPFAMPF01159Ribosomal_L6ecoord: 70..123
e-value: 1.1E-17
score: 64.6
IPR00091560S ribosomal protein L6EPANTHERPTHR1071560S RIBOSOMAL PROTEIN L6coord: 2..121
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availablePANTHERPTHR10715:SF960S RIBOSOMAL PROTEIN L6coord: 2..121
IPR041997Ribosomal Protein L6, KOW domainCDDcd13156KOW_RPL6coord: 25..126
e-value: 1.71384E-61
score: 183.518
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 31..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20661contigP-wetherbeei_contig20661:212..1155 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20661.1.1mRNA_P-wetherbeei_contig20661.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig20661 212..1155 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig20661.1.1 ID=prot_P-wetherbeei_contig20661.1.1|Name=mRNA_P-wetherbeei_contig20661.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=126bp
MAKTPRWYATEDVKQPPKRNKRKPNPPKLRASITPGTVLILLSGRFRGKR
VIFLKQLASGCLLVTGPYKVNGVPLRRVNQAYVIATTTKVDLSKVTVPDI
DDAYFKRVKTEKKNDEGDGFFATPAK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014722Rib_L2_dom2
IPR00091560S_ribosomal_L6E
IPR041997KOW_RPL6
IPR008991Translation_prot_SH3-like_sf