prot_P-wetherbeei_contig20562.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig20562.1.1
Unique Nameprot_P-wetherbeei_contig20562.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length79
Homology
BLAST of mRNA_P-wetherbeei_contig20562.1.1 vs. uniprot
Match: UPI0019845A95 (DNA mismatch repair protein MutS n=1 Tax=Rhizobacter sp. TaxID=1909292 RepID=UPI0019845A95)

HSP 1 Score: 121 bits (304), Expect = 2.440e-34
Identity = 56/73 (76.71%), Postives = 65/73 (89.04%), Query Frame = 0
Query:    6 AANSPVMQQYLGIKAEHPNSLLFYRMGDFYELFFDDAKRAAKLLDLTLTARGTSDGQPIPMAGVPAHAADPYL 78
            + ++P+MQQYL +KAEHP+ L+ YRMGDFYELFFDDA+RAAKLLD+TLTARGTSDG PIPMAGVP HA D YL
Sbjct:    2 STHTPMMQQYLALKAEHPDKLVLYRMGDFYELFFDDARRAAKLLDITLTARGTSDGAPIPMAGVPFHALDGYL 74          
BLAST of mRNA_P-wetherbeei_contig20562.1.1 vs. uniprot
Match: UPI0019F30BCF (DNA mismatch repair protein MutS n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019F30BCF)

HSP 1 Score: 120 bits (302), Expect = 2.770e-33
Identity = 54/74 (72.97%), Postives = 69/74 (93.24%), Query Frame = 0
Query:    5 KAANSPVMQQYLGIKAEHPNSLLFYRMGDFYELFFDDAKRAAKLLDLTLTARGTSDGQPIPMAGVPAHAADPYL 78
            + A++P+MQQYL IKA+HP++LLFYRMGDFYELF+DDAK+A+K+LD+TLTARG S+G+PIPMAG+P HAAD YL
Sbjct:   13 ETAHTPMMQQYLRIKADHPDTLLFYRMGDFYELFYDDAKKASKILDITLTARGQSNGKPIPMAGIPYHAADNYL 86          
BLAST of mRNA_P-wetherbeei_contig20562.1.1 vs. uniprot
Match: A0A2D7YYD6_9GAMM (DNA mismatch repair protein MutS (Fragment) n=1 Tax=Pseudomonadales bacterium TaxID=1891229 RepID=A0A2D7YYD6_9GAMM)

HSP 1 Score: 120 bits (300), Expect = 1.360e-32
Identity = 54/76 (71.05%), Postives = 66/76 (86.84%), Query Frame = 0
Query:    3 TDKAANSPVMQQYLGIKAEHPNSLLFYRMGDFYELFFDDAKRAAKLLDLTLTARGTSDGQPIPMAGVPAHAADPYL 78
            T+ +A++P+MQQY  IK +HP  LLFYRMGDFYELF+DDAK+AA+LLD+TLTARG S GQPIPMAG+P HAA+ YL
Sbjct:    6 TESSAHTPMMQQYFSIKQQHPEQLLFYRMGDFYELFYDDAKKAARLLDITLTARGQSGGQPIPMAGIPFHAAEGYL 81          
BLAST of mRNA_P-wetherbeei_contig20562.1.1 vs. uniprot
Match: A0A3D1Y2C5_9GAMM (DNA mismatch repair protein MutS (Fragment) n=1 Tax=Oceanospirillales bacterium TaxID=1914300 RepID=A0A3D1Y2C5_9GAMM)

HSP 1 Score: 115 bits (288), Expect = 6.690e-32
Identity = 53/73 (72.60%), Postives = 66/73 (90.41%), Query Frame = 0
Query:    6 AANSPVMQQYLGIKAEHPNSLLFYRMGDFYELFFDDAKRAAKLLDLTLTARGTSDGQPIPMAGVPAHAADPYL 78
            ++++P+MQQY  IK+E P++LLFYRMGDFYELFFDDAKRAA++LD+TLTARG S GQPIPMAGVP HAA+ Y+
Sbjct:    5 SSHTPMMQQYFKIKSEFPDTLLFYRMGDFYELFFDDAKRAAQILDITLTARGQSGGQPIPMAGVPFHAAENYI 77          
BLAST of mRNA_P-wetherbeei_contig20562.1.1 vs. uniprot
Match: A0A2M8DVU7_9PROT (DNA mismatch repair protein MutS (Fragment) n=3 Tax=unclassified Nitrosomonadales TaxID=1660158 RepID=A0A2M8DVU7_9PROT)

HSP 1 Score: 115 bits (288), Expect = 8.210e-32
Identity = 54/71 (76.06%), Postives = 65/71 (91.55%), Query Frame = 0
Query:    8 NSPVMQQYLGIKAEHPNSLLFYRMGDFYELFFDDAKRAAKLLDLTLTARGTSDGQPIPMAGVPAHAADPYL 78
            ++P+MQQYLGIKA+HP+ LLFYRMGDFYELF +DA+RAAKLL++TLT RGTS+GQPI MAGVP HAA+ YL
Sbjct:   18 HTPMMQQYLGIKAQHPDLLLFYRMGDFYELFHEDAERAAKLLNITLTQRGTSNGQPIKMAGVPYHAAEQYL 88          
BLAST of mRNA_P-wetherbeei_contig20562.1.1 vs. uniprot
Match: UPI001A0AABFB (DNA mismatch repair protein MutS n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI001A0AABFB)

HSP 1 Score: 125 bits (314), Expect = 1.020e-31
Identity = 58/75 (77.33%), Postives = 69/75 (92.00%), Query Frame = 0
Query:    4 DKAANSPVMQQYLGIKAEHPNSLLFYRMGDFYELFFDDAKRAAKLLDLTLTARGTSDGQPIPMAGVPAHAADPYL 78
            + A+++P+MQQYL IKAEHPN+LLFYRMGDFYELFFDDAK+AAK+LD+TLTARG S G+PIPMAG+P HAAD YL
Sbjct:   13 EPASHTPMMQQYLRIKAEHPNTLLFYRMGDFYELFFDDAKKAAKILDITLTARGQSAGKPIPMAGIPYHAADNYL 87          
BLAST of mRNA_P-wetherbeei_contig20562.1.1 vs. uniprot
Match: A0A6L7WV49_9CHLR (DNA mismatch repair protein MutS (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L7WV49_9CHLR)

HSP 1 Score: 118 bits (295), Expect = 1.920e-31
Identity = 56/75 (74.67%), Postives = 65/75 (86.67%), Query Frame = 0
Query:    4 DKAANSPVMQQYLGIKAEHPNSLLFYRMGDFYELFFDDAKRAAKLLDLTLTARGTSDGQPIPMAGVPAHAADPYL 78
            D  A++P+MQQYL IKA++P++LLFYRMGDFYELF+DDAKRAA LLD+TLTARG S G PIPMAGVP HA D YL
Sbjct:    2 DLTAHTPMMQQYLSIKAQYPDTLLFYRMGDFYELFYDDAKRAAGLLDITLTARGQSAGNPIPMAGVPFHAVDGYL 76          
BLAST of mRNA_P-wetherbeei_contig20562.1.1 vs. uniprot
Match: A0A3B0WRK6_9ZZZZ (DNA mismatch repair protein MutS n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0WRK6_9ZZZZ)

HSP 1 Score: 124 bits (310), Expect = 3.540e-31
Identity = 57/74 (77.03%), Postives = 67/74 (90.54%), Query Frame = 0
Query:    5 KAANSPVMQQYLGIKAEHPNSLLFYRMGDFYELFFDDAKRAAKLLDLTLTARGTSDGQPIPMAGVPAHAADPYL 78
            K  ++P+MQQYL IKA+HP++LLFYRMGDFYELFFDDAK+AAK+LD+TLTARG SDG PIPMAG+P HAAD YL
Sbjct:   12 KIEHTPMMQQYLRIKADHPDTLLFYRMGDFYELFFDDAKKAAKILDITLTARGKSDGNPIPMAGIPYHAADNYL 85          
BLAST of mRNA_P-wetherbeei_contig20562.1.1 vs. uniprot
Match: A0A536VJW0_9PROT (DNA mismatch repair protein MutS (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536VJW0_9PROT)

HSP 1 Score: 114 bits (285), Expect = 3.640e-31
Identity = 53/73 (72.60%), Postives = 63/73 (86.30%), Query Frame = 0
Query:    6 AANSPVMQQYLGIKAEHPNSLLFYRMGDFYELFFDDAKRAAKLLDLTLTARGTSDGQPIPMAGVPAHAADPYL 78
            +A++P+MQQYL +KAEHP+ L+FYRMGDFYELF+ DA+RAA LLD+TLTARG S G PIPMAGVP HA D YL
Sbjct:   16 SAHTPMMQQYLRVKAEHPDKLVFYRMGDFYELFYGDAQRAAPLLDITLTARGQSAGSPIPMAGVPYHAVDQYL 88          
BLAST of mRNA_P-wetherbeei_contig20562.1.1 vs. uniprot
Match: A0A7V5XDN2_9GAMM (DNA mismatch repair protein MutS (Fragment) n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7V5XDN2_9GAMM)

HSP 1 Score: 117 bits (292), Expect = 3.920e-31
Identity = 54/71 (76.06%), Postives = 65/71 (91.55%), Query Frame = 0
Query:    8 NSPVMQQYLGIKAEHPNSLLFYRMGDFYELFFDDAKRAAKLLDLTLTARGTSDGQPIPMAGVPAHAADPYL 78
            ++P+MQQYL IKAE P++LLFYRMGDFYELF+DDA+RAA+L+D+TLTARG S GQPIPMAG+P HAAD YL
Sbjct:   16 HTPMMQQYLRIKAEFPDTLLFYRMGDFYELFYDDARRAAELIDITLTARGKSAGQPIPMAGIPYHAADTYL 86          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20562.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0019845A952.440e-3476.71DNA mismatch repair protein MutS n=1 Tax=Rhizobact... [more]
UPI0019F30BCF2.770e-3372.97DNA mismatch repair protein MutS n=1 Tax=Proteobac... [more]
A0A2D7YYD6_9GAMM1.360e-3271.05DNA mismatch repair protein MutS (Fragment) n=1 Ta... [more]
A0A3D1Y2C5_9GAMM6.690e-3272.60DNA mismatch repair protein MutS (Fragment) n=1 Ta... [more]
A0A2M8DVU7_9PROT8.210e-3276.06DNA mismatch repair protein MutS (Fragment) n=3 Ta... [more]
UPI001A0AABFB1.020e-3177.33DNA mismatch repair protein MutS n=1 Tax=Proteobac... [more]
A0A6L7WV49_9CHLR1.920e-3174.67DNA mismatch repair protein MutS (Fragment) n=1 Ta... [more]
A0A3B0WRK6_9ZZZZ3.540e-3177.03DNA mismatch repair protein MutS n=1 Tax=hydrother... [more]
A0A536VJW0_9PROT3.640e-3172.60DNA mismatch repair protein MutS (Fragment) n=1 Ta... [more]
A0A7V5XDN2_9GAMM3.920e-3176.06DNA mismatch repair protein MutS (Fragment) n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016151DNA mismatch repair protein MutS, N-terminalGENE3D3.40.1170.10DNA repair protein MutS, domain Icoord: 2..79
e-value: 2.3E-27
score: 97.5
IPR016151DNA mismatch repair protein MutS, N-terminalSUPERFAMILY55271DNA repair protein MutS, domain Icoord: 4..78
IPR007695DNA mismatch repair protein MutS-like, N-terminalPFAMPF01624MutS_Icoord: 10..78
e-value: 1.4E-23
score: 83.2
NoneNo IPR availablePANTHERPTHR11361:SF130DNA MISMATCH REPAIR PROTEIN MSH1, MITOCHONDRIALcoord: 8..78
IPR045076DNA mismatch repair MutS familyPANTHERPTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERcoord: 8..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20562contigP-wetherbeei_contig20562:45..281 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20562.1.1mRNA_P-wetherbeei_contig20562.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig20562 45..281 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig20562.1.1 ID=prot_P-wetherbeei_contig20562.1.1|Name=mRNA_P-wetherbeei_contig20562.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=79bp
MATDKAANSPVMQQYLGIKAEHPNSLLFYRMGDFYELFFDDAKRAAKLLD
LTLTARGTSDGQPIPMAGVPAHAADPYLX
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016151DNA_mismatch_repair_MutS_N
IPR007695DNA_mismatch_repair_MutS-lik_N
IPR045076MutS_family