prot_P-wetherbeei_contig20402.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig20402.1.1
Unique Nameprot_P-wetherbeei_contig20402.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length224
Homology
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BLAST of mRNA_P-wetherbeei_contig20402.1.1 vs. uniprot
Match: D7G8V7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8V7_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 2.340e-20
Identity = 49/84 (58.33%), Postives = 57/84 (67.86%), Query Frame = 0 
Query:    1 LAPEAIRVEVTFEVGNTPNVLLEESQPGNRLIVKGFPKRRDGRPGAAEQSGRIERGDFLEACNYIILEGIPFRSAIDLLMAQPY 84
            + PEA   EV F  G TPN+LLEESQPGN+L VK FPKR DG  G AE  G+IE+GDFL A N I LEG+ F  AI +L  Q +
Sbjct:  287 IGPEATVFEVVFPPGRTPNILLEESQPGNKLTVKSFPKRADGSRGTAEADGKIEKGDFLLAVNSIRLEGLGFNDAIRVLTTQQW 370
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20402.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8V7_ECTSI2.340e-2058.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 45..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20402contigP-wetherbeei_contig20402:409..1227 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20402.1.1mRNA_P-wetherbeei_contig20402.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig20402 409..1227 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig20402.1.1 ID=prot_P-wetherbeei_contig20402.1.1|Name=mRNA_P-wetherbeei_contig20402.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=224bp
LAPEAIRVEVTFEVGNTPNVLLEESQPGNRLIVKGFPKRRDGRPGAAEQS
GRIERGDFLEACNYIILEGIPFRSAIDLLMAQPYPLTLRFRRVPRHLLAH
AFERWSVNALRSVLLEVGVELTGLERHAQLVAMARRSFWHRPVPLPPAPP
KVEPGAAAVANGETSIMGWLLVKPPGEAVFRRFFCDLHGAELFLHNPVAY
EATPAMSVDMSTIRLVATTRSSEE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036034PDZ_sf