prot_P-wetherbeei_contig203.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig203.2.1
Unique Nameprot_P-wetherbeei_contig203.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length66
Homology
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BLAST of mRNA_P-wetherbeei_contig203.2.1 vs. uniprot
Match: D7FGT3_ECTSI (ABC1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGT3_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 5.930e-9
Identity = 30/65 (46.15%), Postives = 44/65 (67.69%), Query Frame = 0 
Query:    1 MHSTLAFSTFFNAALILTVAGGGAAGLSLPARAAWLLAAVAGAQVPLGLLKLRRQDKTFEKFGVR 65
            M+  +AFSTF NAALIL+      + L LP R AW LA V G ++P+GL K+R+QD+ +  +G++
Sbjct:  695 MYDAIAFSTFLNAALILSATLSAGSPL-LPVRVAWTLAGVFGLRIPVGLFKIRKQDQKYSTYGLK 758
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig203.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FGT3_ECTSI5.930e-946.15ABC1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig203contigP-wetherbeei_contig203:1749..1946 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig203.2.1mRNA_P-wetherbeei_contig203.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig203 1416..2099 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig203.2.1 ID=prot_P-wetherbeei_contig203.2.1|Name=mRNA_P-wetherbeei_contig203.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=66bp
MHSTLAFSTFFNAALILTVAGGGAAGLSLPARAAWLLAAVAGAQVPLGLL
KLRRQDKTFEKFGVR*
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