prot_P-wetherbeei_contig20199.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig20199.1.1
Unique Name	prot_P-wetherbeei_contig20199.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	107

Homology

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BLAST of mRNA_P-wetherbeei_contig20199.1.1 vs. uniprot
Match: UPI001390035B (metalloregulator ArsR/SmtB family transcription factor n=3 Tax=Gemmata TaxID=113 RepID=UPI001390035B)

HSP 1 Score: 94.4 bits (233), Expect = 7.540e-23
Identity = 52/98 (53.06%), Postives = 68/98 (69.39%), Query Frame = 0

Query:    3 EQSHMEAVARLFEVLSDVNRLAILQSLREQPHAVGQLVDQLKLSQPMVSKHLAVLYEAGLLHRERRRTHVFYSIREPMVFKLWELVTEKLRADAEHQV 100
            +++ +EAV+RLF VL++  RLAILQ L+  P AV +LVD+L   Q  +SK L +LY AGLL RER    V YSI E M+F+L ELV  KLR DAE ++
Sbjct:    7 DRNALEAVSRLFAVLAEPTRLAILQCLKSGPKAVSELVDELGAKQANISKQLGILYAAGLLSRERDGNLVRYSIAESMIFELCELVCGKLRRDAERRL 104

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BLAST of mRNA_P-wetherbeei_contig20199.1.1 vs. uniprot
Match: UPI001D06D710 (metalloregulator ArsR/SmtB family transcription factor n=1 Tax=Frigoriglobus tundricola TaxID=2774151 RepID=UPI001D06D710)

HSP 1 Score: 90.9 bits (224), Expect = 1.280e-20
Identity = 48/94 (51.06%), Postives = 66/94 (70.21%), Query Frame = 0

Query:    7 MEAVARLFEVLSDVNRLAILQSLREQPHAVGQLVDQLKLSQPMVSKHLAVLYEAGLLHRERRRTHVFYSIREPMVFKLWELVTEKLRADAEHQV 100
            +EAVARLF VL++  RL +LQ L+  P +V +LV++L+  Q  VSK L +L+ AGL+ R R    + YSI EPM+F+L ELV +KLR DAE Q+
Sbjct:   88 LEAVARLFGVLAEPTRLGLLQDLKAGPRSVSELVERLQAKQANVSKQLGILHAAGLVARARDGNVIRYSIAEPMIFELCELVCDKLRRDAERQL 181

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BLAST of mRNA_P-wetherbeei_contig20199.1.1 vs. uniprot
Match: A0A142XD56_9BACT (Putative HTH-type transcriptional regulator n=1 Tax=Gemmata sp. SH-PL17 TaxID=1630693 RepID=A0A142XD56_9BACT)

HSP 1 Score: 88.2 bits (217), Expect = 1.410e-20
Identity = 49/91 (53.85%), Postives = 62/91 (68.13%), Query Frame = 0

Query:   10 VARLFEVLSDVNRLAILQSLREQPHAVGQLVDQLKLSQPMVSKHLAVLYEAGLLHRERRRTHVFYSIREPMVFKLWELVTEKLRADAEHQV 100
            ++RLF VL++  RLAILQ L+  P AV +LVD+L   Q  +SK L +LY AGLL RER    V YSI E M+F+L ELV  KLR DAE ++
Sbjct:    1 MSRLFAVLAEPTRLAILQCLKSGPKAVSELVDELGAKQANISKQLGILYAAGLLSRERDGNLVRYSIAESMIFELCELVCGKLRRDAERRL 91

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BLAST of mRNA_P-wetherbeei_contig20199.1.1 vs. uniprot
Match: A0A2E0QZV8_9BACT (Transcriptional regulator n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2E0QZV8_9BACT)

HSP 1 Score: 88.6 bits (218), Expect = 1.750e-20
Identity = 45/93 (48.39%), Postives = 64/93 (68.82%), Query Frame = 0

Query:    7 MEAVARLFEVLSDVNRLAILQSLREQPHAVGQLVDQLKLSQPMVSKHLAVLYEAGLLHRERRRTHVFYSIREPMVFKLWELVTEKLRADAEHQ 99
            +E +A LF+V ++  RLAILQ LR  PH+V ++V+ L  SQ  VSK L +LY+A LL RE+R   V YS+ EP+V++L ELV +KL   A+ +
Sbjct:   24 LEKIAALFKVFAEPTRLAILQLLRRGPHSVNEIVEALPTSQANVSKQLRLLYDADLLSREQRGNQVIYSVHEPLVYELCELVCDKLNRQAKSE 116

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BLAST of mRNA_P-wetherbeei_contig20199.1.1 vs. uniprot
Match: A0A2E2B2L1_9BACT (Transcriptional regulator n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A2E2B2L1_9BACT)

HSP 1 Score: 88.2 bits (217), Expect = 2.110e-20
Identity = 47/95 (49.47%), Postives = 65/95 (68.42%), Query Frame = 0

Query:    7 MEAVARLFEVLSDVNRLAILQSLREQPHAVGQLVDQLKLSQPMVSKHLAVLYEAGLLHRERRRTHVFYSIREPMVFKLWELVTEKLRADAEHQVR 101
            ++ VAR+F+VL D  RLAIL+ L +QP  V ++V+ L+  Q  +SKHL +L++AGL+ RER    V Y+I EPMVF L +LV  KL+ DA  Q R
Sbjct:   13 IKTVARMFKVLGDPTRLAILKMLFDQPLTVTEMVEALEAKQANISKHLGMLHDAGLVSRERNGNQVIYAICEPMVFDLCQLVCCKLQKDAVQQAR 107

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BLAST of mRNA_P-wetherbeei_contig20199.1.1 vs. uniprot
Match: A0A7V2D0E5_9BACT (ArsR family transcriptional regulator n=1 Tax=Chthoniobacterales bacterium TaxID=2201154 RepID=A0A7V2D0E5_9BACT)

HSP 1 Score: 85.1 bits (209), Expect = 5.230e-19
Identity = 47/97 (48.45%), Postives = 63/97 (64.95%), Query Frame = 0

Query:    7 MEAVARLFEVLSDVNRLAILQSLREQPHAVGQLVDQLKLSQPMVSKHLAVLYEAGLLHRERRRTHVFYSIREPMVFKLWELVTEKLRADAEHQVRLF 103
            + AVARLF VL++ +RLA+LQ+L+  P +V  LV+   + Q  VSKHLAVL    L+ RER+ + VFYSI +PM+F L  LV  K+  DA     LF
Sbjct:   14 LRAVARLFGVLAEPSRLALLQTLQSGPRSVTDLVESTGMKQANVSKHLAVLLHHRLVERERQGSTVFYSIADPMIFPLCRLVCGKMERDAAAAAALF 110

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BLAST of mRNA_P-wetherbeei_contig20199.1.1 vs. uniprot
Match: K9U4N0_CHRTP (Transcriptional regulator, ArsR family n=4 Tax=Cyanobacteria TaxID=1117 RepID=K9U4N0_CHRTP)

HSP 1 Score: 81.6 bits (200), Expect = 7.890e-18
Identity = 40/97 (41.24%), Postives = 58/97 (59.79%), Query Frame = 0

Query:    7 MEAVARLFEVLSDVNRLAILQSLREQPHAVGQLVDQLKLSQPMVSKHLAVLYEAGLLHRERRRTHVFYSIREPMVFKLWELVTEKLRADAEHQVRLF 103
            M+ VA  F +LS+  RL +L  LR+    V +LVD  + SQ  VSKHL ++++AG+L R    T  +Y + + M+F+LW LV  +L    EHQ R F
Sbjct:   12 MQQVAEYFSLLSEPMRLRLLSLLRDGEKCVQELVDATQTSQANVSKHLKIMWQAGILSRRSEGTSAYYRVEDDMIFQLWNLVCHRLATRVEHQARQF 108

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BLAST of mRNA_P-wetherbeei_contig20199.1.1 vs. uniprot
Match: A0A3M1SH54_9BACT (ArsR family transcriptional regulator n=2 Tax=Acidobacteria TaxID=57723 RepID=A0A3M1SH54_9BACT)

HSP 1 Score: 80.1 bits (196), Expect = 2.640e-17
Identity = 42/98 (42.86%), Postives = 64/98 (65.31%), Query Frame = 0

Query:    8 EAVARLFEVLSDVNRLAILQSLREQPHAVGQLVDQLKLSQPMVSKHLAVLYEAGLLHRERRRTHVFYSIREPMVFKLWELVTEKLRADAEHQVRLFNS 105
            E +A  F++LS+  RL I+ SL+E+  +V QL +++K SQP VSKHL +L +AGL+HR ++   V+YSI +  VF L E V   L    ++Q ++F S
Sbjct:   11 EIIALRFKILSEPLRLRIIHSLQEKEKSVNQLREEVKTSQPNVSKHLRILQDAGLVHRRQQGNVVYYSIADESVFDLCETVCNSLEKRFKNQAKIFAS 108

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BLAST of mRNA_P-wetherbeei_contig20199.1.1 vs. uniprot
Match: E8V633_TERSS (Regulatory protein ArsR n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) TaxID=401053 RepID=E8V633_TERSS)

HSP 1 Score: 79.3 bits (194), Expect = 6.200e-17
Identity = 47/101 (46.53%), Postives = 62/101 (61.39%), Query Frame = 0

Query:    1 MPEQSHMEAVARLFEVLSDVNRLAILQSLREQPHAVGQLVDQLKLSQPMVSKHLAVLYEAGLLHRERRRTHVFYSIREPMVFKLWELV----TEKLRADAE 97
            M  +  +E VAR F  L +  RL ILQ L     +VG+LV  L+ +QP VSKHL +L +AGL+ R R  T +FY+I +PMVFKL  LV    T+K R + E
Sbjct:    5 MMSEKMLELVARRFRTLGEPFRLRILQELEAGEKSVGELVAALEGNQPNVSKHLQILSDAGLIARRREGTSIFYTISDPMVFKLCALVCSSETQKSRREFE 105

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BLAST of mRNA_P-wetherbeei_contig20199.1.1 vs. uniprot
Match: A0A2T2RHU2_9CYAN (Transcriptional regulator n=1 Tax=Cyanobacteria bacterium SW_9_44_58 TaxID=1919144 RepID=A0A2T2RHU2_9CYAN)

HSP 1 Score: 79.0 bits (193), Expect = 9.490e-17
Identity = 40/95 (42.11%), Postives = 63/95 (66.32%), Query Frame = 0

Query:   10 VARLFEVLSDVNRLAILQSLREQPHAVGQLVDQLKLSQPMVSKHLAVLYEAGLLHRERRRTHVFYSIREPMVFKLWELVTEKLRADAEHQVRLFN 104
            VA  F+VLS+V+RL IL +LRE+P    ++ +   L Q  +SKHL VL +AG+L RE++    +YSI++PM+F+L ELV + +  + + +   FN
Sbjct:   15 VADYFKVLSEVSRLQILNALREKPMNGKEIAEATGLGQANLSKHLKVLTQAGILKREQKGVSAYYSIKDPMIFELCELVCDTISNEFQERAESFN 109

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig20199.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig20199.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
UPI001390035B	7.540e-23	53.06	metalloregulator ArsR/SmtB family transcription fa...	[more]
UPI001D06D710	1.280e-20	51.06	metalloregulator ArsR/SmtB family transcription fa...	[more]
A0A142XD56_9BACT	1.410e-20	53.85	Putative HTH-type transcriptional regulator n=1 Ta...	[more]
A0A2E0QZV8_9BACT	1.750e-20	48.39	Transcriptional regulator n=1 Tax=Verrucomicrobial...	[more]
A0A2E2B2L1_9BACT	2.110e-20	49.47	Transcriptional regulator n=1 Tax=Phycisphaeraceae...	[more]
A0A7V2D0E5_9BACT	5.230e-19	48.45	ArsR family transcriptional regulator n=1 Tax=Chth...	[more]
K9U4N0_CHRTP	7.890e-18	41.24	Transcriptional regulator, ArsR family n=4 Tax=Cya...	[more]
A0A3M1SH54_9BACT	2.640e-17	42.86	ArsR family transcriptional regulator n=2 Tax=Acid...	[more]
E8V633_TERSS	6.200e-17	46.53	Regulatory protein ArsR n=1 Tax=Terriglobus saanen...	[more]
A0A2T2RHU2_9CYAN	9.490e-17	42.11	Transcriptional regulator n=1 Tax=Cyanobacteria ba...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001845	HTH ArsR-type DNA-binding domain	PRINTS	PR00778	HTHARSR	coord: 14..29 score: 41.88 coord: 46..61 score: 46.46 coord: 61..76 score: 27.92
IPR001845	HTH ArsR-type DNA-binding domain	SMART	SM00418	arsrmega2	coord: 12..90 e-value: 1.9E-21 score: 87.3
IPR001845	HTH ArsR-type DNA-binding domain	PFAM	PF01022	HTH_5	coord: 19..63 e-value: 1.8E-15 score: 56.5
IPR001845	HTH ArsR-type DNA-binding domain	PROSITE	PS50987	HTH_ARSR_2	coord: 2..96 score: 17.451685
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 1..101 e-value: 4.3E-25 score: 89.6
None	No IPR available	PANTHER	PTHR43132	ARSENICAL RESISTANCE OPERON REPRESSOR ARSR-RELATED	coord: 2..102
IPR011991	ArsR-like helix-turn-helix domain	CDD	cd00090	HTH_ARSR	coord: 14..78 e-value: 3.94844E-16 score: 65.3977
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 6..97

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig20199	contig	P-wetherbeei_contig20199:493..813 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig20199.1.1	mRNA_P-wetherbeei_contig20199.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig20199 490..813 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig20199.1.1 ID=prot_P-wetherbeei_contig20199.1.1|Name=mRNA_P-wetherbeei_contig20199.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=107bp
MPEQSHMEAVARLFEVLSDVNRLAILQSLREQPHAVGQLVDQLKLSQPMV
SKHLAVLYEAGLLHRERRRTHVFYSIREPMVFKLWELVTEKLRADAEHQV
RLFNSN*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001845	HTH_ArsR_DNA-bd_dom
IPR036388	WH-like_DNA-bd_sf
IPR011991	ArsR-like_HTH
IPR036390	WH_DNA-bd_sf