prot_P-wetherbeei_contig1981.6.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1981.6.1
Unique Nameprot_P-wetherbeei_contig1981.6.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length93
Homology
BLAST of mRNA_P-wetherbeei_contig1981.6.1 vs. uniprot
Match: A0A835ZBL6_9STRA (Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBL6_9STRA)

HSP 1 Score: 110 bits (274), Expect = 7.080e-29
Identity = 55/78 (70.51%), Postives = 63/78 (80.77%), Query Frame = 0
Query:   16 MAKIGKGSPGNLGSGRQPVTTGGSGTGTAVITKDKIKEKSGEKVQRKEQLDKESWWRVILHNDEIHTFDYVTKSIIKV 93
            MA IGK  PGNLGSG+  V TG   TGT+V+ KD++KEK  ++VQRKEQLDKE WWRVILHND+IHTFDYVT SI KV
Sbjct:   24 MADIGKKGPGNLGSGKGEVQTGSPSTGTSVLVKDRVKEKVEDQVQRKEQLDKEKWWRVILHNDDIHTFDYVTLSITKV 101          
BLAST of mRNA_P-wetherbeei_contig1981.6.1 vs. uniprot
Match: D8LIY1_ECTSI (ClpS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIY1_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 2.070e-16
Identity = 40/59 (67.80%), Postives = 46/59 (77.97%), Query Frame = 0
Query:   35 TTGGSGTGTAVITKDKIKEKSGEKVQRKEQLDKESWWRVILHNDEIHTFDYVTKSIIKV 93
            T GG+GTG   I K+K+KE    +V  KE+LDKE WWRVILHNDEIHTFDYVT+SI KV
Sbjct:   79 TGGGTGTGVQTIVKEKVKEMV--EVDNKEELDKEQWWRVILHNDEIHTFDYVTQSITKV 135          
BLAST of mRNA_P-wetherbeei_contig1981.6.1 vs. uniprot
Match: A0A835ZHY3_9STRA (Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHY3_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 2.200e-15
Identity = 35/44 (79.55%), Postives = 39/44 (88.64%), Query Frame = 0
Query:   50 KIKEKSGEKVQRKEQLDKESWWRVILHNDEIHTFDYVTKSIIKV 93
            ++KEK  +KVQRKEQLDKE WWRVILHND+IHTFDYVT SI KV
Sbjct:   11 RVKEKVEDKVQRKEQLDKEKWWRVILHNDDIHTFDYVTLSITKV 54          
BLAST of mRNA_P-wetherbeei_contig1981.6.1 vs. uniprot
Match: A0A7S1TKB3_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKB3_9RHOD)

HSP 1 Score: 70.1 bits (170), Expect = 7.960e-13
Identity = 42/79 (53.16%), Postives = 55/79 (69.62%), Query Frame = 0
Query:   16 MAKIGKGSPGNLGSGR-QPVTTGGSGTGTAVITKDKIKEKSGEKVQRKEQLDKESWWRVILHNDEIHTFDYVTKSIIKV 93
            MA IG+  P N+G G+ Q   TGG G G   I K ++K+KS    +R+EQ D+E  WRV+LHND++HTFDYVT SI+KV
Sbjct:   65 MADIGRSKP-NIGGGKFQREDTGGKG-GVVTIQKPEVKKKS----KREEQTDREPNWRVLLHNDDVHTFDYVTGSIVKV 137          
BLAST of mRNA_P-wetherbeei_contig1981.6.1 vs. uniprot
Match: A0A7S1T7M9_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T7M9_9RHOD)

HSP 1 Score: 67.8 bits (164), Expect = 3.170e-12
Identity = 41/82 (50.00%), Postives = 55/82 (67.07%), Query Frame = 0
Query:   12 GWTMMAKIGKGSPGNLGSGRQPVTTGGSGTGTAVITKDKIKEKSGEKVQRKEQLDKESWWRVILHNDEIHTFDYVTKSIIKV 93
            G   MA IG+  P ++G G+ P  T GS  G+ V+  + I +K   K +R+EQ DKE  WRV+LHND++HTFDYVT SI+KV
Sbjct:   24 GKVHMADIGRPRP-DVGGGKGP--TFGSEKGSGVLVAEPIVKKKP-KTRREEQTDKEPSWRVLLHNDDVHTFDYVTMSIVKV 101          
BLAST of mRNA_P-wetherbeei_contig1981.6.1 vs. uniprot
Match: A0A7S2GQ17_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GQ17_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 3.600e-12
Identity = 33/69 (47.83%), Postives = 45/69 (65.22%), Query Frame = 0
Query:   25 GNLGSGRQPVTTGGSGTGTAVITKDKIKEKSGEKVQRKEQLDKESWWRVILHNDEIHTFDYVTKSIIKV 93
            G+ G G +       G G   IT DK+      +VQ KE L++E WWRV+LHNDEIHTF+YVT++I+K+
Sbjct:    2 GDGGGGSEKQKQSRKGAGVQTITIDKV----DNEVQEKEDLNEEGWWRVLLHNDEIHTFEYVTEAIVKI 66          
BLAST of mRNA_P-wetherbeei_contig1981.6.1 vs. uniprot
Match: R7Q4R1_CHOCR (ClpS domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4R1_CHOCR)

HSP 1 Score: 67.4 bits (163), Expect = 6.350e-12
Identity = 45/94 (47.87%), Postives = 59/94 (62.77%), Query Frame = 0
Query:    3 SRPARTPAPGWT--MMAKIGKGSPGNLGSGRQPVTTGGS-GTGTAVITKDKIKEKSGEKVQRKEQLDKESWWRVILHNDEIHTFDYVTKSIIKV 93
            SR    PAP ++  MMA I K  PG  G  R P   G   G G AVITK  +K+K+    +RK + +KE  WRV+LHND++HTF+YVT +I+KV
Sbjct:   85 SRKPGHPAPCFSVSMMADISKPRPGVGGPKRGPEFGGADKGGGVAVITKPDVKQKT----KRKAKTEKEPSWRVLLHNDDVHTFEYVTGAIVKV 174          
BLAST of mRNA_P-wetherbeei_contig1981.6.1 vs. uniprot
Match: A0A7S2W133_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W133_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 6.590e-11
Identity = 30/54 (55.56%), Postives = 39/54 (72.22%), Query Frame = 0
Query:   40 GTGTAVITKDKIKEKSGEKVQRKEQLDKESWWRVILHNDEIHTFDYVTKSIIKV 93
            G G   IT D+    +  KV+ K  LDKE WWRV+LHNDEIHTF+YVT++++KV
Sbjct:    7 GRGVTTITIDRTD--TDTKVEEKMDLDKEGWWRVLLHNDEIHTFEYVTEALVKV 58          
BLAST of mRNA_P-wetherbeei_contig1981.6.1 vs. uniprot
Match: L1J9P0_GUITC (ClpS domain-containing protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1J9P0_GUITC)

HSP 1 Score: 64.7 bits (156), Expect = 9.340e-11
Identity = 41/87 (47.13%), Postives = 56/87 (64.37%), Query Frame = 0
Query:   11 PGWTMMAKIGKG-SPGNLGSGRQPVTTG---GSGTGTAVITKDKIKEKSGEKVQRKEQLDKESWWRVILHNDEIHTFDYVTKSIIKV 93
            PG    +KI KG S GN+G    P  +    G G G AV+TK    +K+ +  ++KEQ+DKE  WRV+LHND++HTFDYV  +I+KV
Sbjct:   54 PGDGGASKINKGGSGGNVGGKGGPDFSKDQEGGGAGVAVLTKPPDLDKAAD-YEKKEQVDKEPIWRVLLHNDDVHTFDYVIDTIVKV 139          
BLAST of mRNA_P-wetherbeei_contig1981.6.1 vs. uniprot
Match: A0A5J4Z744_PORPP (ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z744_PORPP)

HSP 1 Score: 64.7 bits (156), Expect = 1.060e-10
Identity = 39/79 (49.37%), Postives = 52/79 (65.82%), Query Frame = 0
Query:   15 MMAKIGKGSPGNLGSGRQPVTTGGSGTGTAVITKDKIKEKSGEKVQRKEQLDKESWWRVILHNDEIHTFDYVTKSIIKV 93
            MMA IGKGSP N+G G+    T  S      I K ++K+KS    +RK + +KE  WRV+LHND++HTFDYVT  I++V
Sbjct:   75 MMADIGKGSP-NIGGGKFEQDT--SRGNVITIQKPEVKKKS----ERKSETEKEKNWRVLLHNDDVHTFDYVTGIIVQV 146          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1981.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZBL6_9STRA7.080e-2970.51Ribosomal protein L7/L12, C-terminal/adaptor prote... [more]
D8LIY1_ECTSI2.070e-1667.80ClpS domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835ZHY3_9STRA2.200e-1579.55Ribosomal protein L7/L12, C-terminal/adaptor prote... [more]
A0A7S1TKB3_9RHOD7.960e-1353.16Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7S1T7M9_9RHOD3.170e-1250.00Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S2GQ17_9STRA3.600e-1247.83Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
R7Q4R1_CHOCR6.350e-1247.87ClpS domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A7S2W133_9STRA6.590e-1155.56Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
L1J9P0_GUITC9.340e-1147.13ClpS domain-containing protein n=2 Tax=Geminigerac... [more]
A0A5J4Z744_PORPP1.060e-1049.37ATP-dependent Clp protease adapter protein ClpS n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003769Adaptor protein ClpS, corePFAMPF02617ClpScoord: 67..92
e-value: 1.7E-6
score: 27.7
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeGENE3D3.30.1390.10coord: 45..93
e-value: 3.5E-9
score: 38.2
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeSUPERFAMILY54736ClpS-likecoord: 64..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1981contigP-wetherbeei_contig1981:5884..6162 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1981.6.1mRNA_P-wetherbeei_contig1981.6.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1981 5884..6162 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1981.6.1 ID=prot_P-wetherbeei_contig1981.6.1|Name=mRNA_P-wetherbeei_contig1981.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=93bp
VASRPARTPAPGWTMMAKIGKGSPGNLGSGRQPVTTGGSGTGTAVITKDK
IKEKSGEKVQRKEQLDKESWWRVILHNDEIHTFDYVTKSIIKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003769ClpS_core
IPR014719Ribosomal_L7/12_C/ClpS-like