prot_P-wetherbeei_contig18568.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig18568.1.1
Unique Nameprot_P-wetherbeei_contig18568.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length67
Homology
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BLAST of mRNA_P-wetherbeei_contig18568.1.1 vs. uniprot
Match: D8LD88_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD88_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 1.280e-9
Identity = 32/53 (60.38%), Postives = 40/53 (75.47%), Query Frame = 0 
Query:    1 LLQAASSIRVTRSLLASLQQDFAVDLIREHLQGGRGAWLTRYGDARAGRPGSG 53
            LL+  + +++TRS L SLQQDFAV L++EHLQG  G WLTRYGDA    PG+G
Sbjct:  444 LLRETADVKLTRSTLNSLQQDFAVQLLKEHLQG-EGQWLTRYGDAPDPTPGAG 495
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BLAST of mRNA_P-wetherbeei_contig18568.1.1 vs. uniprot
Match: A0A6H5KV33_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV33_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 1.310e-9
Identity = 32/53 (60.38%), Postives = 40/53 (75.47%), Query Frame = 0 
Query:    1 LLQAASSIRVTRSLLASLQQDFAVDLIREHLQGGRGAWLTRYGDARAGRPGSG 53
            LL+  + +++TRS L SLQQDFAV L++EHLQG  G WLTRYGDA    PG+G
Sbjct:  487 LLRETAEVKLTRSTLNSLQQDFAVQLLKEHLQG-EGQWLTRYGDAPDPTPGAG 538
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18568.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LD88_ECTSI1.280e-960.38Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KV33_9PHAE1.310e-960.38Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18568contigP-wetherbeei_contig18568:131..331 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18568.1.1mRNA_P-wetherbeei_contig18568.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig18568 131..331 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig18568.1.1 ID=prot_P-wetherbeei_contig18568.1.1|Name=mRNA_P-wetherbeei_contig18568.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=67bp
LLQAASSIRVTRSLLASLQQDFAVDLIREHLQGGRGAWLTRYGDARAGRP
GSGGSSSGGGGGGGNGI
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