prot_P-wetherbeei_contig17243.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig17243.2.1
Unique Nameprot_P-wetherbeei_contig17243.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length176
Homology
BLAST of mRNA_P-wetherbeei_contig17243.2.1 vs. uniprot
Match: A0A1F4DKJ3_9PROT (Lipopolysaccharide export system protein LptA n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4DKJ3_9PROT)

HSP 1 Score: 210 bits (535), Expect = 3.290e-66
Identity = 108/168 (64.29%), Postives = 136/168 (80.95%), Query Frame = 0
Query:   12 AAPAFAERADREKPVNLEADRVDLDDAKKEAVFVGSVTLTQGTLTIKADKIIVKQDAEGFQYGIAYGNPVHFRQKREGSDEYIEGFSERLEYDGKADKMQMFVNARIQRGVDEVRGDYIAYNAVTEFFQVIGGGKAAATTGNPQGRVRAVIQPKSK---PGAPASASP 176
            A  A+AE+ADREKP+NLEADRV +DDA++ AVF G V LTQGTL I+ D++ V+QD +GF++G  +GN  +FRQKREG D+YIEG++ER+EYDG+ADKMQMF  A ++RG DEVRG+YI+Y+A TEFFQVIGGG  AAT  NP+GRVRAV+QPK K   P AP S +P
Sbjct:   33 ATAAYAEKADREKPINLEADRVTVDDARQIAVFEGHVVLTQGTLMIRGDRMQVRQDNDGFKHGTTWGNLAYFRQKREGYDDYIEGWAERIEYDGRADKMQMFNRALMKRGQDEVRGNYISYDATTEFFQVIGGGPKAATPNNPEGRVRAVLQPKPKEKTPAAPVSLTP 200          
BLAST of mRNA_P-wetherbeei_contig17243.2.1 vs. uniprot
Match: A0A7C3JPE8_9PROT (Lipopolysaccharide export system protein LptA n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C3JPE8_9PROT)

HSP 1 Score: 208 bits (530), Expect = 1.210e-65
Identity = 108/168 (64.29%), Postives = 136/168 (80.95%), Query Frame = 0
Query:    7 AAGLGAAP-AFAERADREKPVNLEADRVDLDDAKKEAVFVGSVTLTQGTLTIKADKIIVKQDAEGFQYGIAYGNPVHFRQKREGSDEYIEGFSERLEYDGKADKMQMFVNARIQRGVDEVRGDYIAYNAVTEFFQVIGGGKAAATTGNPQGRVRAVIQPKSKPGAPAS 173
            A  L AAP A AE+ADR+KP+NLEADRV +DDAK+ A+F G+V LTQGTL I+ D++ V+QD EGF+YG  +G+  HFRQKREG DEYIEG++ER+EYDG+A+ MQMF  AR++R  DEVRG+YI+Y+A TEF+QV+GGG  AAT  NP+GRVRAVIQPK K   PA+
Sbjct:   12 ALALLAAPLARAEKADRDKPINLEADRVTIDDAKQTAMFEGNVVLTQGTLQIRGDRMEVRQDKEGFRYGTTWGDLAHFRQKREGYDEYIEGWAERIEYDGRAETMQMFARARMRRAQDEVRGNYISYDARTEFYQVVGGGPRAATANNPEGRVRAVIQPKPKEQPPAA 179          
BLAST of mRNA_P-wetherbeei_contig17243.2.1 vs. uniprot
Match: A0A7V8ZNN2_9BURK (Lipopolysaccharide export system protein LptA n=2 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7V8ZNN2_9BURK)

HSP 1 Score: 206 bits (524), Expect = 5.320e-65
Identity = 103/163 (63.19%), Postives = 135/163 (82.82%), Query Frame = 0
Query:   13 APAFAERADREKPVNLEADRVDLDDAKKEAVFVGSVTLTQGTLTIKADKIIVKQDAEGFQYGIAYGNPVHFRQKREGSDEYIEGFSERLEYDGKADKMQMFVNARIQRGVDEVRGDYIAYNAVTEFFQVIGGGKAAATTGNPQGRVRAVIQPKSKPGAPASAS 175
            A A AE  D +KPVNLEADRV++DDA++ +VF G+V +TQGTL I+ADKI+++QD  GFQ+GIAYG PV F+QKREG++E+IEG+ ER+EYDGK++K++ F  AR++RG DEVRG+YI+Y+AV E +QV GGGK AAT  NPQGRVRAVIQPK +P   A++S
Sbjct:    7 AVAQAELGDSDKPVNLEADRVNIDDARQVSVFEGNVKMTQGTLAIQADKIVIRQDDSGFQHGIAYGAPVIFKQKREGTNEFIEGYGERVEYDGKSNKIEFFTKARVKRGDDEVRGNYISYDAVAESYQVRGGGKEAATANNPQGRVRAVIQPKKQPAESAASS 169          
BLAST of mRNA_P-wetherbeei_contig17243.2.1 vs. uniprot
Match: A0A1F4A5S4_9PROT (Lipopolysaccharide export system protein LptA n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 TaxID=1797482 RepID=A0A1F4A5S4_9PROT)

HSP 1 Score: 206 bits (525), Expect = 6.710e-65
Identity = 103/162 (63.58%), Postives = 132/162 (81.48%), Query Frame = 0
Query:   12 AAPAFAERADREKPVNLEADRVDLDDAKKEAVFVGSVTLTQGTLTIKADKIIVKQDAEGFQYGIAYGNPVHFRQKREGSDEYIEGFSERLEYDGKADKMQMFVNARIQRGVDEVRGDYIAYNAVTEFFQVIGGGKAAATTGNPQGRVRAVIQPKSKPGAPAS 173
            A  A  E+ADR+KP+NLEADRV +DDAK+ A F G+V LTQGT+ I+ D++ V+QD +GF++GI++G   +FRQKREG DEYIEG++ER+EYDG+ADK+QMF  A ++RG DEVRGDYI+Y+A TEFFQVIGGG  AA+  NP GRVRAV+QPKS+   PAS
Sbjct:   17 AGAAHGEKADRDKPINLEADRVTVDDAKQLATFEGNVVLTQGTMVIRGDRMEVRQDYDGFRHGISWGKLAYFRQKREGFDEYIEGWAERIEYDGRADKVQMFTRAAMKRGQDEVRGDYISYDATTEFFQVIGGGAKAASPNNPDGRVRAVMQPKSREKPPAS 178          
BLAST of mRNA_P-wetherbeei_contig17243.2.1 vs. uniprot
Match: A0A1F4DTU7_9PROT (Lipopolysaccharide export system protein LptA n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DTU7_9PROT)

HSP 1 Score: 206 bits (523), Expect = 2.180e-64
Identity = 109/175 (62.29%), Postives = 140/175 (80.00%), Query Frame = 0
Query:    1 MALLALAAGLGAAPA-FAERADREKPVNLEADRVDLDDAKKEAVFVGSVTLTQGTLTIKADKIIVKQDAEGFQYGIAYGNPVHFRQKREGSDEYIEGFSERLEYDGKADKMQMFVNARIQRGVDEVRGDYIAYNAVTEFFQVIGGGKAAATTGNPQGRVRAVIQPKSKPGAPASA 174
            +A+LA    L  A A  AE+ADR+KP+NLEADRV +DDAK+ ++F G+V LTQGT+ I+  ++ V+QD +GF+ G A+G+  +FRQKREG DEYIEG++ER+EYDG+ADKMQMFV A ++RG DEVRG+YI+Y+A TEFFQVIGGG  AAT  NP GRVRAV+QPKSK   PA+A
Sbjct:   20 LAILATCCALLLATASHAEKADRDKPINLEADRVTVDDAKQVSIFDGNVVLTQGTMVIRGYRMEVRQDNDGFKRGTAWGDLAYFRQKREGFDEYIEGWAERIEYDGRADKMQMFVRAYMKRGEDEVRGNYISYDAATEFFQVIGGGAKAATPNNPDGRVRAVLQPKSKQKPPAAA 194          
BLAST of mRNA_P-wetherbeei_contig17243.2.1 vs. uniprot
Match: A0A6F8VFJ9_9PROT (Lipopolysaccharide export system protein LptA n=1 Tax=Sulfurimicrobium lacus TaxID=2715678 RepID=A0A6F8VFJ9_9PROT)

HSP 1 Score: 204 bits (520), Expect = 3.500e-64
Identity = 102/168 (60.71%), Postives = 132/168 (78.57%), Query Frame = 0
Query:   10 LGAAPAFAERADREKPVNLEADRVDLDDAKKEAVFVGSVTLTQGTLTIKADKIIVKQDAEGFQYGIAYGNPVHFRQKREGSDEYIEGFSERLEYDGKADKMQMFVNARIQRGVDEVRGDYIAYNAVTEFFQVIGGGKAAATTGNPQGRVRAVIQPKSKPG-APASASP 176
            L  A   AE ADR+KP+NLEAD V +DDA K + ++G+V LTQGTL I+ADK++V +DA G Q+G AYGNP  FRQKREG DEY+EG+ +R+EYDGK DK+++F  AR++RG DEVRG+YI+Y+A TEFFQ +GGGK  A+ G  +GRV AVIQPK KPG +PA+ +P
Sbjct:   16 LAPATVLAELADRDKPINLEADTVTVDDATKVSTYMGNVQLTQGTLLIRADKLVVTEDATGLQHGTAYGNPASFRQKREGLDEYVEGYGQRIEYDGKNDKVELFTQARMKRGQDEVRGNYISYDAKTEFFQALGGGKEVASPGREKGRVHAVIQPKPKPGKSPAAPAP 183          
BLAST of mRNA_P-wetherbeei_contig17243.2.1 vs. uniprot
Match: A0A4P5UCB1_9PROT (Lipopolysaccharide export system protein LptA n=1 Tax=Nitrosomonadaceae bacterium TaxID=2026767 RepID=A0A4P5UCB1_9PROT)

HSP 1 Score: 201 bits (511), Expect = 4.420e-63
Identity = 102/176 (57.95%), Postives = 137/176 (77.84%), Query Frame = 0
Query:    1 MALLALAAGLGAAPAFAERADREKPVNLEADRVDLDDAKKEAVFVGSVTLTQGTLTIKADKIIVKQDAEGFQYGIAYGNPVHFRQKREGSDEYIEGFSERLEYDGKADKMQMFVNARIQRGVDEVRGDYIAYNAVTEFFQVIGGGKAAATTGNPQGRVRAVIQPKSKPGAPASASP 176
            ++++ L A L +    AERADR+KPVNLEADR  +++A + +VF G+V LTQGTL I+ADK++VK+D+ GF++  A+GNPV FRQKR+G DEYIE +SER+EYDGKADK+Q+F  AR++RG DEV GDYI+Y+AV+EFFQV G  + + T  NP GRVR VIQPK+K  + A+  P
Sbjct:    4 LSVIFLLALLPSGHTLAERADRDKPVNLEADRASVENATRTSVFTGNVVLTQGTLIIRADKMLVKEDSNGFRHATAFGNPVSFRQKRDGKDEYIESWSERMEYDGKADKVQLFKKARLKRGQDEVEGDYISYDAVSEFFQVSGNNEKSDTQANPSGRVRIVIQPKNKQESSAAEKP 179          
BLAST of mRNA_P-wetherbeei_contig17243.2.1 vs. uniprot
Match: A0A1I2ZPT3_9PROT (Lipopolysaccharide export system protein LptA n=2 Tax=Nitrosospira sp. Nsp14 TaxID=1855333 RepID=A0A1I2ZPT3_9PROT)

HSP 1 Score: 200 bits (509), Expect = 2.180e-62
Identity = 102/154 (66.23%), Postives = 124/154 (80.52%), Query Frame = 0
Query:   16 FAERADREKPVNLEADRVDLDDAKKEAVFVGSVTLTQGTLTIKADKIIVKQDAEGFQYGIAYGNPVHFRQKREGSDEYIEGFSERLEYDGKADKMQMFVNARIQRGVDEVRGDYIAYNAVTEFFQVIGGGKAAATTGNPQGRVRAVIQPKSKPG 169
             AERADR++PV+LEADR  + DA K A F G V LTQGTL I+ADK+ VK+DA GFQY  A+GN V FRQKR+G DEY+EG+SER+EYDGKADK+Q+F  AR++RG DEV GDYI+Y+AV EFFQV G G+A+  T + +GRVRAVIQPK KPG
Sbjct:   51 LAERADRDQPVHLEADRATVQDANKLATFTGHVVLTQGTLVIRADKMTVKEDANGFQYATAFGNLVSFRQKRDGRDEYVEGWSERMEYDGKADKVQLFKKARLRRGQDEVHGDYISYDAVNEFFQVNGSGEASTQT-HSEGRVRAVIQPKKKPG 203          
BLAST of mRNA_P-wetherbeei_contig17243.2.1 vs. uniprot
Match: A0A7X1P7P0_9PROT (Lipopolysaccharide export system protein LptA n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7X1P7P0_9PROT)

HSP 1 Score: 199 bits (507), Expect = 2.630e-62
Identity = 99/156 (63.46%), Postives = 129/156 (82.69%), Query Frame = 0
Query:   12 AAPAFAERADREKPVNLEADRVDLDDAKKEAVFVGSVTLTQGTLTIKADKIIVKQDAEGFQYGIAYGNPVHFRQKREGSDEYIEGFSERLEYDGKADKMQMFVNARIQRGVDEVRGDYIAYNAVTEFFQVIGGGKAAATTGNPQGRVRAVIQPKSK 167
            A  A AERADR+KP+NLEADRV +DDAKK +VF G+V LTQGT  +K+D++ V++DA+GFQYG+AYGNP +F+QKR+G DEYIEG++ER+EYDGKA+++Q+F NAR++RG DEVRG YI+Y+  TEF++V+G     A    P GRVRAVIQPKSK
Sbjct:    2 AGTAAAERADRDKPINLEADRVTIDDAKKVSVFEGNVVLTQGTTMLKSDRMTVREDAQGFQYGVAYGNPAYFKQKRDGVDEYIEGWAERIEYDGKAERVQLFDNARMKRGADEVRGSYISYDQPTEFYRVVGAQDNTAGNHAP-GRVRAVIQPKSK 156          
BLAST of mRNA_P-wetherbeei_contig17243.2.1 vs. uniprot
Match: A0A658BRA2_9PROT (Lipopolysaccharide export system protein LptA n=1 Tax=Nitrosomonadales bacterium TaxID=2026761 RepID=A0A658BRA2_9PROT)

HSP 1 Score: 199 bits (507), Expect = 3.740e-62
Identity = 105/164 (64.02%), Postives = 129/164 (78.66%), Query Frame = 0
Query:   13 APAFAERADREKPVNLEADRVDLDDAKKEAVFVGSVTLTQGTLTIKADKIIVKQDAEGFQYGIAYGNPVHFRQKREGSDEYIEGFSERLEYDGKADKMQMFVNARIQRGVDEVRGDYIAYNAVTEFFQVIGGGKAAATTGNPQGRVRAVIQPKSKPGAPASASP 176
            A   AE ADR+KPVNLEAD V+LDDA K +V+ G+V L+QGTL I+ADK++VK+DA G Q+  AYGNP  FRQKREG DEYIEG+  R+EYD + +K ++F  AR++R  DEVRG+YI+Y+A TEFFQVIGGGK AA  G  +GRVRAVIQPK+K GA ASA P
Sbjct:   23 ATGHAELADRDKPVNLEADTVNLDDASKVSVYQGNVQLSQGTLLIRADKLVVKEDAAGLQHATAYGNPASFRQKREGLDEYIEGYGLRIEYDARIEKAELFTQARMKRNQDEVRGNYISYDARTEFFQVIGGGKEAAAPGREKGRVRAVIQPKAKAGA-ASAXP 185          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17243.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F4DKJ3_9PROT3.290e-6664.29Lipopolysaccharide export system protein LptA n=1 ... [more]
A0A7C3JPE8_9PROT1.210e-6564.29Lipopolysaccharide export system protein LptA n=1 ... [more]
A0A7V8ZNN2_9BURK5.320e-6563.19Lipopolysaccharide export system protein LptA n=2 ... [more]
A0A1F4A5S4_9PROT6.710e-6563.58Lipopolysaccharide export system protein LptA n=1 ... [more]
A0A1F4DTU7_9PROT2.180e-6462.29Lipopolysaccharide export system protein LptA n=1 ... [more]
A0A6F8VFJ9_9PROT3.500e-6460.71Lipopolysaccharide export system protein LptA n=1 ... [more]
A0A4P5UCB1_9PROT4.420e-6357.95Lipopolysaccharide export system protein LptA n=1 ... [more]
A0A1I2ZPT3_9PROT2.180e-6266.23Lipopolysaccharide export system protein LptA n=2 ... [more]
A0A7X1P7P0_9PROT2.630e-6263.46Lipopolysaccharide export system protein LptA n=1 ... [more]
A0A658BRA2_9PROT3.740e-6264.02Lipopolysaccharide export system protein LptA n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014340Lipopolysaccharide export system protein LptATIGRFAMTIGR03002TIGR03002coord: 17..165
e-value: 3.6E-45
score: 151.3
IPR014340Lipopolysaccharide export system protein LptAHAMAPMF_01914LPS_assembly_LptAcoord: 1..165
score: 26.054335
IPR005653Organic solvent tolerance-like, N-terminalPFAMPF03968LptD_Ncoord: 28..137
e-value: 1.3E-28
score: 99.5
NoneNo IPR availableGENE3D2.60.450.10Lipopolysaccharide (LPS) transport protein A like domaincoord: 19..168
e-value: 1.3E-40
score: 140.4
NoneNo IPR availablePANTHERPTHR36504LIPOPOLYSACCHARIDE EXPORT SYSTEM PROTEIN LPTAcoord: 2..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17243contigP-wetherbeei_contig17243:846..1373 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17243.2.1mRNA_P-wetherbeei_contig17243.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig17243 846..1382 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig17243.2.1 ID=prot_P-wetherbeei_contig17243.2.1|Name=mRNA_P-wetherbeei_contig17243.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=176bp
MALLALAAGLGAAPAFAERADREKPVNLEADRVDLDDAKKEAVFVGSVTL
TQGTLTIKADKIIVKQDAEGFQYGIAYGNPVHFRQKREGSDEYIEGFSER
LEYDGKADKMQMFVNARIQRGVDEVRGDYIAYNAVTEFFQVIGGGKAAAT
TGNPQGRVRAVIQPKSKPGAPASASP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014340LptA
IPR005653OstA-like_N