prot_P-wetherbeei_contig1628.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1628.1.2 vs. uniprot
Match: A0A835ZG91_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG91_9STRA) HSP 1 Score: 168 bits (425), Expect = 7.800e-50 Identity = 92/145 (63.45%), Postives = 110/145 (75.86%), Query Frame = 0
Query: 1 MGAPPGAPQFALGPLAPPTPPISALPAF-PGAASLYEQLDRRLLVVLRDGRHLVGVMRSYDQFANIVLEDTHERHFVGDLYGDIPLGLYIVRGDSVVLMGEM-----DDGREAATGLRKVSQEEILEAQQQSDADSAPHRVEWEF 139
MG PP P PL P PP+ A P+F PGAASL+EQLD+ ++VVLRDGRHLVG+MRSYDQF+NIVLEDTHERHFVG LYGDIPLGLYIVRGDSVVL+GE+ L++V+ +EIL+AQQ+SD D P +VEW+F
Sbjct: 90 MGPPPQFPXXGAMPLGRPXPPVIAPPSFFPGAASLHEQLDKVVMVVLRDGRHLVGLMRSYDQFSNIVLEDTHERHFVGALYGDIPLGLYIVRGDSVVLLGEVAAEXXXXXXXXXALLKRVTADEILQAQQESDVD--PFKVEWDF 232
BLAST of mRNA_P-wetherbeei_contig1628.1.2 vs. uniprot
Match: D8LL00_ECTSI (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL00_ECTSI) HSP 1 Score: 159 bits (402), Expect = 1.250e-47 Identity = 76/113 (67.26%), Postives = 98/113 (86.73%), Query Frame = 0
Query: 28 FPGAASLYEQLDRRLLVVLRDGRHLVGVMRSYDQFANIVLEDTHERHFVGDLYGDIPLGLYIVRGDSVVLMGEMDDGREAATGLRKVSQEEILEAQQQSDADSAPH-RVEWEF 139
FPG+ASL+EQLD+R++VVLRDGRHLVGVMRSYDQF+NIVLEDTHERHFV D++GDI LGLY+VRGD++VLMGE+D+ RE LR+VS +EI+EAQQ++ A+ +++W F
Sbjct: 22 FPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEERQDAKLDWLF 134
BLAST of mRNA_P-wetherbeei_contig1628.1.2 vs. uniprot
Match: A0A6H5JKJ0_9PHAE (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKJ0_9PHAE) HSP 1 Score: 160 bits (404), Expect = 1.550e-46 Identity = 77/113 (68.14%), Postives = 98/113 (86.73%), Query Frame = 0
Query: 28 FPGAASLYEQLDRRLLVVLRDGRHLVGVMRSYDQFANIVLEDTHERHFVGDLYGDIPLGLYIVRGDSVVLMGEMDDGREAATGLRKVSQEEILEAQQQSDA-DSAPHRVEWEF 139
FPG+ASL+EQLD+R++VVLRDGRHLVGVMRSYDQF+NIVLEDTHERHFV D++GDI LGLY+VRGD++VLMGE+D+ RE LR+VS +EI+EAQQ++ A D +++W F
Sbjct: 129 FPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEDRQDAKLDWLF 241
BLAST of mRNA_P-wetherbeei_contig1628.1.2 vs. uniprot
Match: A0A4D9CWQ3_9STRA (Sm domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWQ3_9STRA) HSP 1 Score: 149 bits (375), Expect = 4.920e-41 Identity = 84/140 (60.00%), Postives = 106/140 (75.71%), Query Frame = 0
Query: 2 GAPPGAPQFALGPLAPPTPPISALPAF-PGAASLYEQLDRRLLVVLRDGRHLVGVMRSYDQFANIVLEDTHERHFVGDLYGDIPLGLYIVRGDSVVLMGEMDDGREAATGLRKVSQEEILEAQQQSDADSAPHRVEWEFD 140
GAPP P + L PP P ++ LP + PGAASL EQLDRR+LVVLRDGR+LVGV+RS+DQF+N+VLEDT+ERH V YGD+PLGLY+VRGD+VVL+GE++ RE + L KV+ EEILE Q S A +VEW+F+
Sbjct: 218 GAPPPGPHYML----PPRPFVAVLPDYLPGAASLVEQLDRRVLVVLRDGRNLVGVLRSFDQFSNMVLEDTYERHVVDGKYGDLPLGLYLVRGDAVVLLGEVEAEREGKS-LEKVTTEEILELLQGSGEAGA--KVEWDFE 350
BLAST of mRNA_P-wetherbeei_contig1628.1.2 vs. uniprot
Match: A0A7S2XVC4_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVC4_9STRA) HSP 1 Score: 137 bits (344), Expect = 4.560e-39 Identity = 68/114 (59.65%), Postives = 94/114 (82.46%), Query Frame = 0
Query: 28 FPGAASLYEQLDRRLLVVLRDGRHLVGVMRSYDQFANIVLEDTHERHFVGDLYGDIPLGLYIVRGDSVVLMGEMDDGREAATGL-RKVSQEEILEAQQQSDADSAPHRVEWEFD 140
F G SL EQLD+++LVVLRDGRHLVGV+RS+DQF+N+V+E+THERH V ++GDIPLGLYIVRGD+VVL+GE+D+ +E+++ R+VS EEIL AQ+ ++ + +V W+FD
Sbjct: 5 FAGGMSLVEQLDKKILVVLRDGRHLVGVLRSFDQFSNMVMENTHERHVVEGIFGDIPLGLYIVRGDNVVLLGEVDEEKESSSQHPRRVSAEEILHAQRNTEDKT---KVAWDFD 115
BLAST of mRNA_P-wetherbeei_contig1628.1.2 vs. uniprot
Match: W4GB80_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GB80_9STRA) HSP 1 Score: 135 bits (341), Expect = 1.610e-38 Identity = 68/121 (56.20%), Postives = 91/121 (75.21%), Query Frame = 0
Query: 22 ISALPAFPGAASLYEQLDRRLLVVLRDGRHLVGVMRSYDQFANIVLEDTHERHFVGDLYGDIPLGLYIVRGDSVVLMGEMDDGREAA-TGLRKVSQEEILEAQQQSDADSAPH-RVEWEFD 140
++++ FPG +SL EQLD++LLVVLRDGRHLVG++RS+DQF+NIVLE T ERH VG+ Y DIPLGLYI+RG+++VLMGE+D +EA L + S EE+L A+ + + P R W FD
Sbjct: 1 MNSMTGFPGVSSLVEQLDKQLLVVLRDGRHLVGIIRSFDQFSNIVLEGTCERHVVGNTYCDIPLGLYIIRGENIVLMGELDQAKEAEDVNLTRKSAEEVLTAEMEQNEQGLPTVRDAWNFD 121
BLAST of mRNA_P-wetherbeei_contig1628.1.2 vs. uniprot
Match: A0A7S2CG66_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CG66_9STRA) HSP 1 Score: 135 bits (339), Expect = 3.240e-38 Identity = 67/124 (54.03%), Postives = 93/124 (75.00%), Query Frame = 0
Query: 17 PPTPPISALPAFPGAASLYEQLDRRLLVVLRDGRHLVGVMRSYDQFANIVLEDTHERHFVGDLYGDIPLGLYIVRGDSVVLMGEMDDGREAATGLRKVSQEEILEAQQQSDADSAPHRVEWEFD 140
PP P PGAASL +QLD+R+L+VLRDGRHLVG++RS+DQF+N+VLEDTHERH L D+ LGL+IVRGD++VL+GE+D +EA++GL + +LEA++ +SA +VEW+F+
Sbjct: 4 PPMEPTQMGLLLPGAASLVDQLDKRILIVLRDGRHLVGILRSFDQFSNMVLEDTHERHVANGLRSDMALGLFIVRGDNIVLLGELDPEKEASSGLIDAEPDVVLEAER----NSAFTKVEWDFE 123
BLAST of mRNA_P-wetherbeei_contig1628.1.2 vs. uniprot
Match: A0A6G0XJC2_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJC2_9STRA) HSP 1 Score: 134 bits (338), Expect = 4.200e-38 Identity = 66/116 (56.90%), Postives = 88/116 (75.86%), Query Frame = 0
Query: 27 AFPGAASLYEQLDRRLLVVLRDGRHLVGVMRSYDQFANIVLEDTHERHFVGDLYGDIPLGLYIVRGDSVVLMGEMDDGREAATG--LRKVSQEEILEAQQQSDADSAPHRVEWEFD 140
AFPG SL EQLD+++LVVLRDGRHLVG++RS+DQ++NIVLE+T ERH VG+ Y DIPLGLYI+RG+++VLMGE+D +EAA +RK ++E + +Q + A R W FD
Sbjct: 3 AFPGVTSLVEQLDKQMLVVLRDGRHLVGMIRSFDQYSNIVLEETCERHVVGNTYCDIPLGLYIIRGENIVLMGELDQAKEAADENLVRKTAEEVLTAEMEQQEQGQATVRDTWNFD 118
BLAST of mRNA_P-wetherbeei_contig1628.1.2 vs. uniprot
Match: A0A485L216_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L216_9STRA) HSP 1 Score: 134 bits (338), Expect = 4.460e-38 Identity = 69/116 (59.48%), Postives = 87/116 (75.00%), Query Frame = 0
Query: 27 AFPGAASLYEQLDRRLLVVLRDGRHLVGVMRSYDQFANIVLEDTHERHFVGDLYGDIPLGLYIVRGDSVVLMGEMDDGREAAT-GLRKVSQEEILEAQQQSDADSAPH-RVEWEFD 140
AFPG SL EQ+D+++LVVLRDGRHLVG++RS+DQF+NIVLEDT ERH VG Y DIPLGLYI+RG+++VLMGE+D +EAA L + S EE+L A+ + P R W FD
Sbjct: 4 AFPGVTSLVEQVDKQMLVVLRDGRHLVGIIRSFDQFSNIVLEDTCERHVVGTTYCDIPLGLYIIRGENIVLMGELDQEKEAADENLTRKSPEEVLTAEMEQMEQGQPTVRDAWNFD 119
BLAST of mRNA_P-wetherbeei_contig1628.1.2 vs. uniprot
Match: A0A7R9YFM7_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFM7_9STRA) HSP 1 Score: 133 bits (334), Expect = 1.810e-37 Identity = 70/113 (61.95%), Postives = 83/113 (73.45%), Query Frame = 0
Query: 29 PGAASLYEQLDRRLLVVLRDGRHLVGVMRSYDQFANIVLEDTHERHFVGDLYGDIPLGLYIVRGDSVVLMGEMDDGREAATGLRKVSQEEILEAQQ-QSDADSAPHRVEWEFD 140
PGAASL E LDRRLLVVLRDGRHLVG+MRSYDQFAN+VLE+T ER D Y + PLGLYIVRGDSVVL+GE EA GL+KVS EEI E ++ +++ +W F+
Sbjct: 9 PGAASLMESLDRRLLVVLRDGRHLVGIMRSYDQFANMVLEETVEREVFQDCYAETPLGLYIVRGDSVVLLGETHQDGEARMGLQKVSLEEIAEKRKLENEETGGAGSADWNFE 121 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1628.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-wetherbeei_contig1628.1.2 ID=prot_P-wetherbeei_contig1628.1.2|Name=mRNA_P-wetherbeei_contig1628.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=143bpback to top |