prot_P-wetherbeei_contig16102.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig16102.1.1
Unique Nameprot_P-wetherbeei_contig16102.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length148
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig16102.1.1 vs. uniprot
Match: A0A4D9DHE1_9STRA (Rho-GAP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DHE1_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 4.780e-14
Identity = 56/173 (32.37%), Postives = 82/173 (47.40%), Query Frame = 0 
Query:    1 PALSTEVVCFLRLAIKHLDENALQEEGLYRISGRSDVVASLTKAIKDGRLTT-EMLAS-CGDVHAVAGAVKRTLRDHAPVIPYDMYLSFCAP-------------------------DADFAALRHQLPPASERLLECLLQHLRRVLAHSDVNRMTAPALARVVGLNMARRGE 146
            P ++      +++A+  L   AL  EGLYR+SG    V SL   + +G L + E L S   D H VAGA+K+ L++H P++ Y +Y  F A                          +  + AL   L PA   LL  L++HL RV    + NRMT   LA  VG+++ R+ E
Sbjct:  132 PPMTPAATASVKIALDFLGSTALGVEGLYRVSGNKLDVDSLKALMAEGLLVSAETLRSHYPDKHVVAGAIKKVLQEHEPLLSYRLYADFVAASFNPIAGPLEGNEGDRACKEESGGKEGRYMALVQDLRPAPRDLLGHLMRHLVRVAERKEANRMTPENLAVTVGMHLLRKSE 304
[Close]
BLAST of mRNA_P-wetherbeei_contig16102.1.1 vs. uniprot
Match: A0A8C7VYK4_ONCMY (Rho GTPase activating protein 12a n=2 Tax=Oncorhynchus mykiss TaxID=8022 RepID=A0A8C7VYK4_ONCMY)

HSP 1 Score: 77.8 bits (190), Expect = 7.200e-14
Identity = 47/146 (32.19%), Postives = 75/146 (51.37%), Query Frame = 0 
Query:    4 STEVVCFLRLAIKHLDENALQEEGLYRISGRSDVVASLTKAIKDGRLTTEMLASCGDVHAVAGAVKRTLRD-HAPVIPYDMYLSFCAPDADFAALRHQLPPASERLLECLLQHLRRVLAHSDVNRMTAPALARVVGLNMARRGEET 148
            +T V  F+ + I H++ NAL  +GLYR+SG   V+  L  A+              D+H + GA+K   R+   P+  Y ++  F    ++      QLP  ++  ++ L +HLRRV+ HS+ NRMT  ++A V G  + R   ET
Sbjct:  579 NTAVPSFVTMCIDHVENNALNVDGLYRVSGNLAVIQKLRFAVNHDEKVNLEEGKWEDIHVITGALKMFFRELPEPLFTYGLFHDFVNSISEERV--KQLPKPNQDTMQVLFKHLRRVIDHSEENRMTTQSVAIVFGPTLLRPETET 722
[Close]
BLAST of mRNA_P-wetherbeei_contig16102.1.1 vs. uniprot
Match: A0A060YWY8_ONCMY (Rho-GAP domain-containing protein n=7 Tax=Oncorhynchus TaxID=8016 RepID=A0A060YWY8_ONCMY)

HSP 1 Score: 75.5 bits (184), Expect = 8.970e-14
Identity = 50/155 (32.26%), Postives = 78/155 (50.32%), Query Frame = 0 
Query:    4 STEVVCFLRLAIKHLDENALQEEGLYRISGRSDVVASLTKAIKDGRLTTEMLASCGDVHAVAGAVKRTLRD-HAPVIPYDMYLSFC----APDAD--FAALRH---QLPPASERLLECLLQHLRRVLAHSDVNRMTAPALARVVGLNMARRGEET 148
            +T V  F+ + I H++ NAL  +GLYR+SG   V+  L  A+              D+H + GA+K   R+   P+  Y ++  F      PD      ++R    QLP  ++  ++ L +HLRRV+ HS+ NRMT  ++A V G  + R   ET
Sbjct:   55 NTAVPSFVTMCIDHVENNALNVDGLYRVSGNLAVIQKLRFAVNHDEKVNLEEGKWEDIHVITGALKMFFRELPEPLFTYGLFHDFVNSIKIPDNKQRVQSIRERVKQLPKPNQDTMQVLFKHLRRVIDHSEENRMTTQSVAIVFGPTLLRPETET 209
[Close]
BLAST of mRNA_P-wetherbeei_contig16102.1.1 vs. uniprot
Match: A0A8C7S3H8_ONCMY (Rho GTPase activating protein 12a n=5 Tax=Oncorhynchus TaxID=8016 RepID=A0A8C7S3H8_ONCMY)

HSP 1 Score: 75.5 bits (184), Expect = 4.630e-13
Identity = 50/155 (32.26%), Postives = 78/155 (50.32%), Query Frame = 0 
Query:    4 STEVVCFLRLAIKHLDENALQEEGLYRISGRSDVVASLTKAIKDGRLTTEMLASCGDVHAVAGAVKRTLRD-HAPVIPYDMYLSFC----APDAD--FAALRH---QLPPASERLLECLLQHLRRVLAHSDVNRMTAPALARVVGLNMARRGEET 148
            +T V  F+ + I H++ NAL  +GLYR+SG   V+  L  A+              D+H + GA+K   R+   P+  Y ++  F      PD      ++R    QLP  ++  ++ L +HLRRV+ HS+ NRMT  ++A V G  + R   ET
Sbjct:  603 NTAVPSFVTMCIDHVENNALNVDGLYRVSGNLAVIQKLRFAVNHDEKVNLEEGKWEDIHVITGALKMFFRELPEPLFTYGLFHDFVNSIKIPDNKQRVQSIRERVKQLPKPNQDTMQVLFKHLRRVIDHSEENRMTTQSVAIVFGPTLLRPETET 757
[Close]
BLAST of mRNA_P-wetherbeei_contig16102.1.1 vs. uniprot
Match: A0A8K9XNW6_ONCMY (Rho GTPase activating protein 12a n=3 Tax=Oncorhynchus mykiss TaxID=8022 RepID=A0A8K9XNW6_ONCMY)

HSP 1 Score: 75.5 bits (184), Expect = 4.680e-13
Identity = 50/155 (32.26%), Postives = 78/155 (50.32%), Query Frame = 0 
Query:    4 STEVVCFLRLAIKHLDENALQEEGLYRISGRSDVVASLTKAIKDGRLTTEMLASCGDVHAVAGAVKRTLRD-HAPVIPYDMYLSFC----APDAD--FAALRH---QLPPASERLLECLLQHLRRVLAHSDVNRMTAPALARVVGLNMARRGEET 148
            +T V  F+ + I H++ NAL  +GLYR+SG   V+  L  A+              D+H + GA+K   R+   P+  Y ++  F      PD      ++R    QLP  ++  ++ L +HLRRV+ HS+ NRMT  ++A V G  + R   ET
Sbjct:  677 NTAVPSFVTMCIDHVENNALNVDGLYRVSGNLAVIQKLRFAVNHDEKVNLEEGKWEDIHVITGALKMFFRELPEPLFTYGLFHDFVNSIKIPDNKQRVQSIRERVKQLPKPNQDTMQVLFKHLRRVIDHSEENRMTTQSVAIVFGPTLLRPETET 831
[Close]
BLAST of mRNA_P-wetherbeei_contig16102.1.1 vs. uniprot
Match: A0A8C8HRJ0_ONCTS (Rho-GAP domain-containing protein n=1 Tax=Oncorhynchus tshawytscha TaxID=74940 RepID=A0A8C8HRJ0_ONCTS)

HSP 1 Score: 75.1 bits (183), Expect = 5.510e-13
Identity = 49/155 (31.61%), Postives = 75/155 (48.39%), Query Frame = 0 
Query:    4 STEVVCFLRLAIKHLDENALQEEGLYRISGRSDVVASLTKAIKDGRLTTEMLASCGDVHAVAGAVKRTLRD-HAPVIPYDMYLSFC----APD-----ADFAALRHQLPPASERLLECLLQHLRRVLAHSDVNRMTAPALARVVGLNMARRGEET 148
            +T V  F+ + I H++ NAL  +GLYR+SG   V+  L  A+              D+H + GA+K   R+   P+  Y ++  F      PD             QLP  ++  ++ L +HLRRV+ HS+ NRMT  ++A V G  + R   ET
Sbjct:  267 NTAVPSFVTMCIDHVENNALNVDGLYRVSGNLAVIQKLRFAVNHDEKVNLEEGKWEDIHVITGALKMFFRELPEPLFTYGLFHDFVNSIKIPDNKQRVQSIKERVKQLPKPNQDTMQVLFKHLRRVIDHSEENRMTTQSVAIVFGPTLLRPETET 421
[Close]
BLAST of mRNA_P-wetherbeei_contig16102.1.1 vs. uniprot
Match: A0A8C8M628_ONCTS (Uncharacterized protein n=1 Tax=Oncorhynchus tshawytscha TaxID=74940 RepID=A0A8C8M628_ONCTS)

HSP 1 Score: 75.1 bits (183), Expect = 6.280e-13
Identity = 49/155 (31.61%), Postives = 75/155 (48.39%), Query Frame = 0 
Query:    4 STEVVCFLRLAIKHLDENALQEEGLYRISGRSDVVASLTKAIKDGRLTTEMLASCGDVHAVAGAVKRTLRD-HAPVIPYDMYLSFC----APD-----ADFAALRHQLPPASERLLECLLQHLRRVLAHSDVNRMTAPALARVVGLNMARRGEET 148
            +T V  F+ + I H++ NAL  +GLYR+SG   V+  L  A+              D+H + GA+K   R+   P+  Y ++  F      PD             QLP  ++  ++ L +HLRRV+ HS+ NRMT  ++A V G  + R   ET
Sbjct:  577 NTAVPSFVTMCIDHVENNALNVDGLYRVSGNLAVIQKLRFAVNHDEKVNLEEGKWEDIHVITGALKMFFRELPEPLFTYGLFHDFVNSIKIPDNKQRVQSIKERVKQLPKPNQDTMQVLFKHLRRVIDHSEENRMTTQSVAIVFGPTLLRPETET 731
[Close]
BLAST of mRNA_P-wetherbeei_contig16102.1.1 vs. uniprot
Match: A0A8C8HXR1_ONCTS (Uncharacterized protein n=1 Tax=Oncorhynchus tshawytscha TaxID=74940 RepID=A0A8C8HXR1_ONCTS)

HSP 1 Score: 75.1 bits (183), Expect = 6.290e-13
Identity = 49/155 (31.61%), Postives = 75/155 (48.39%), Query Frame = 0 
Query:    4 STEVVCFLRLAIKHLDENALQEEGLYRISGRSDVVASLTKAIKDGRLTTEMLASCGDVHAVAGAVKRTLRD-HAPVIPYDMYLSFC----APD-----ADFAALRHQLPPASERLLECLLQHLRRVLAHSDVNRMTAPALARVVGLNMARRGEET 148
            +T V  F+ + I H++ NAL  +GLYR+SG   V+  L  A+              D+H + GA+K   R+   P+  Y ++  F      PD             QLP  ++  ++ L +HLRRV+ HS+ NRMT  ++A V G  + R   ET
Sbjct:  588 NTAVPSFVTMCIDHVENNALNVDGLYRVSGNLAVIQKLRFAVNHDEKVNLEEGKWEDIHVITGALKMFFRELPEPLFTYGLFHDFVNSIKIPDNKQRVQSIKERVKQLPKPNQDTMQVLFKHLRRVIDHSEENRMTTQSVAIVFGPTLLRPETET 742
[Close]
BLAST of mRNA_P-wetherbeei_contig16102.1.1 vs. uniprot
Match: A0A8C8HRE0_ONCTS (Uncharacterized protein n=1 Tax=Oncorhynchus tshawytscha TaxID=74940 RepID=A0A8C8HRE0_ONCTS)

HSP 1 Score: 75.1 bits (183), Expect = 6.320e-13
Identity = 49/155 (31.61%), Postives = 75/155 (48.39%), Query Frame = 0 
Query:    4 STEVVCFLRLAIKHLDENALQEEGLYRISGRSDVVASLTKAIKDGRLTTEMLASCGDVHAVAGAVKRTLRD-HAPVIPYDMYLSFC----APD-----ADFAALRHQLPPASERLLECLLQHLRRVLAHSDVNRMTAPALARVVGLNMARRGEET 148
            +T V  F+ + I H++ NAL  +GLYR+SG   V+  L  A+              D+H + GA+K   R+   P+  Y ++  F      PD             QLP  ++  ++ L +HLRRV+ HS+ NRMT  ++A V G  + R   ET
Sbjct:  623 NTAVPSFVTMCIDHVENNALNVDGLYRVSGNLAVIQKLRFAVNHDEKVNLEEGKWEDIHVITGALKMFFRELPEPLFTYGLFHDFVNSIKIPDNKQRVQSIKERVKQLPKPNQDTMQVLFKHLRRVIDHSEENRMTTQSVAIVFGPTLLRPETET 777
[Close]
BLAST of mRNA_P-wetherbeei_contig16102.1.1 vs. uniprot
Match: UPI001C3D9E1B (rho GTPase-activating protein 12 isoform X1 n=3 Tax=Oncorhynchus tshawytscha TaxID=74940 RepID=UPI001C3D9E1B)

HSP 1 Score: 75.1 bits (183), Expect = 6.410e-13
Identity = 49/155 (31.61%), Postives = 75/155 (48.39%), Query Frame = 0 
Query:    4 STEVVCFLRLAIKHLDENALQEEGLYRISGRSDVVASLTKAIKDGRLTTEMLASCGDVHAVAGAVKRTLRD-HAPVIPYDMYLSFC----APD-----ADFAALRHQLPPASERLLECLLQHLRRVLAHSDVNRMTAPALARVVGLNMARRGEET 148
            +T V  F+ + I H++ NAL  +GLYR+SG   V+  L  A+              D+H + GA+K   R+   P+  Y ++  F      PD             QLP  ++  ++ L +HLRRV+ HS+ NRMT  ++A V G  + R   ET
Sbjct:  725 NTAVPSFVTMCIDHVENNALNVDGLYRVSGNLAVIQKLRFAVNHDEKVNLEEGKWEDIHVITGALKMFFRELPEPLFTYGLFHDFVNSIKIPDNKQRVQSIKERVKQLPKPNQDTMQVLFKHLRRVIDHSEENRMTTQSVAIVFGPTLLRPETET 879
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16102.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4D9DHE1_9STRA4.780e-1432.37Rho-GAP domain-containing protein n=2 Tax=Monodops... [more]
A0A8C7VYK4_ONCMY7.200e-1432.19Rho GTPase activating protein 12a n=2 Tax=Oncorhyn... [more]
A0A060YWY8_ONCMY8.970e-1432.26Rho-GAP domain-containing protein n=7 Tax=Oncorhyn... [more]
A0A8C7S3H8_ONCMY4.630e-1332.26Rho GTPase activating protein 12a n=5 Tax=Oncorhyn... [more]
A0A8K9XNW6_ONCMY4.680e-1332.26Rho GTPase activating protein 12a n=3 Tax=Oncorhyn... [more]
A0A8C8HRJ0_ONCTS5.510e-1331.61Rho-GAP domain-containing protein n=1 Tax=Oncorhyn... [more]
A0A8C8M628_ONCTS6.280e-1331.61Uncharacterized protein n=1 Tax=Oncorhynchus tshaw... [more]
A0A8C8HXR1_ONCTS6.290e-1331.61Uncharacterized protein n=1 Tax=Oncorhynchus tshaw... [more]
A0A8C8HRE0_ONCTS6.320e-1331.61Uncharacterized protein n=1 Tax=Oncorhynchus tshaw... [more]
UPI001C3D9E1B6.410e-1331.61rho GTPase-activating protein 12 isoform X1 n=3 Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000198Rho GTPase-activating protein domainSMARTSM00324RhoGAP_3coord: 5..148
e-value: 5.9E-14
score: 62.4
IPR000198Rho GTPase-activating protein domainPFAMPF00620RhoGAPcoord: 10..144
e-value: 1.1E-25
score: 90.3
IPR000198Rho GTPase-activating protein domainPROSITEPS50238RHOGAPcoord: 1..148
score: 22.076027
IPR008936Rho GTPase activation proteinGENE3D1.10.555.10Rho GTPase activation proteincoord: 2..148
e-value: 1.8E-30
score: 107.8
IPR008936Rho GTPase activation proteinSUPERFAMILY48350GTPase activation domain, GAPcoord: 9..146
NoneNo IPR availablePANTHERPTHR23176RHO/RAC/CDC GTPASE-ACTIVATING PROTEINcoord: 10..140
NoneNo IPR availableCDDcd00159RhoGAPcoord: 10..148
e-value: 7.90239E-30
score: 104.306

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16102contigP-wetherbeei_contig16102:43..736 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16102.1.1mRNA_P-wetherbeei_contig16102.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig16102 43..736 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig16102.1.1 ID=prot_P-wetherbeei_contig16102.1.1|Name=mRNA_P-wetherbeei_contig16102.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=148bp
PALSTEVVCFLRLAIKHLDENALQEEGLYRISGRSDVVASLTKAIKDGRL
TTEMLASCGDVHAVAGAVKRTLRDHAPVIPYDMYLSFCAPDADFAALRHQ
LPPASERLLECLLQHLRRVLAHSDVNRMTAPALARVVGLNMARRGEET
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000198RhoGAP_dom
IPR008936Rho_GTPase_activation_prot