prot_P-wetherbeei_contig157.6.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig157.6.1
Unique Nameprot_P-wetherbeei_contig157.6.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length925
Homology
BLAST of mRNA_P-wetherbeei_contig157.6.1 vs. uniprot
Match: D7FYQ1_ECTSI (CID domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYQ1_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 2.590e-20
Identity = 72/194 (37.11%), Postives = 105/194 (54.12%), Query Frame = 0
Query:  248 GDAPSDPAARRRFRAVKFEACHMIRALVLGASLTPAASFTAFHLLHHYQWMCGVPRE---EERLLPALCAACVFLAGKAEDPSCNKWGKLALVVAALRDG---LPPHRG----GDRVRKSAVLEFEGRLLLSRGYDLGIRHPSECVAVILRRLRAPPEMHGPVLEVLESPVYTHDSLCLEEEPEAAVAAAVLYA 431
            G++P +   +R+  ++  + C +IR +            TAFHL HHYQW CG+          LPA+C AC+  A KAED  CN   KL +++  +R     LPP  G    G R     V+ +E +LLLSRG+DL + HP+E ++  L    AP ++     +VL S VYT  +LCLEE+P + + AAV +A
Sbjct:  366 GESPQE--LQRKALSLTLDGCGLIRRIGKAMRFPGRVMLTAFHLFHHYQW-CGLVSSFKFSPPKLPAVCLACLLAATKAED--CN--AKLEVMLHQMRQLEPILPPLEGIFPLGQRPTSKEVVNYEYKLLLSRGFDLEVVHPTEQISAFLVLTGAPLQVGDLAYQVLCSRVYTDSTLCLEEDPLSCLCAAVQFA 552          
BLAST of mRNA_P-wetherbeei_contig157.6.1 vs. uniprot
Match: A0A6H5JRI0_9PHAE (CID domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRI0_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 5.370e-20
Identity = 70/193 (36.27%), Postives = 105/193 (54.40%), Query Frame = 0
Query:  248 GDAPSDPAARRRFRAVKFEACHMIRALVLGASLTPAASFTAFHLLHHYQWMCGVP--REEERLLPALCAACVFLAGKAEDPSCNKWGKLALVVAALRDG---LPPHRG----GDRVRKSAVLEFEGRLLLSRGYDLGIRHPSECVAVILRRLRAPPEMHGPVLEVLESPVYTHDSLCLEEEPEAAVAAAVLYA 431
            G++P +   +R+  ++  + C +IR +            TAFHL HHYQW   V   +     LPA+C AC+  A KAED  CN   KL +++  ++     LPP  G    G R     V+++E +LLLSRG+DL + HP+E ++  L    AP ++     +VL S VYT  +LCLEE+P + + AAV +A
Sbjct:  370 GESPQE--LQRKALSLTLDGCGLIRRIGKAMRFPVRVMLTAFHLFHHYQWCGSVSSFKFSPPKLPAVCLACLLAATKAED--CN--AKLEVMLQQMKQLEPILPPLEGIFPLGQRPTSKEVVDYEYKLLLSRGFDLEVVHPTEQISAFLVLTGAPLQVGDLAYQVLCSRVYTDSTLCLEEDPLSCLCAAVQFA 556          
BLAST of mRNA_P-wetherbeei_contig157.6.1 vs. uniprot
Match: A0A836CAK0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAK0_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 2.990e-15
Identity = 59/188 (31.38%), Postives = 94/188 (50.00%), Query Frame = 0
Query:  263 VKFEACHMIRALVLGASLTPAASFTAFHLLHHYQWMCGVPREEERL-----LPALCAACVFLAGKAEDPSCNKWGKLALVVAALRDGLPPH-----RGGDRVR----------KSAVLEFEGRLLLSRGYDLGIRHPSECVAVILRRLRAPPEMHGPVLEVLESPVYTHDSLCLEEEPEAAVAAAVLY 430
            +K +AC MIR +         A  +AFH  HH+ W   V  +  ++     LPA+C AC+ LAGKAED +  +   L  +   ++  LPP+     RGG              ++ V+ +E R+L +R ++  ++HPS  +   L R R P  +   V  V ++  YT   LCL+E+  A +AAA++Y
Sbjct:    2 LKMDACAMIRHIGRAMRYGERAMLSAFHFFHHFHW---VSLDAGQMWPATDLPAVCLACLHLAGKAEDTA-FRIDYLMDIADQMKMALPPYGAGTGRGGGSSADILAAGRAPSRADVVRYEYRILETRRFNTNVQHPSRRLPEALARARVPAALRDVVPGVFQTRAYTDCDLCLQEDYRAVIAAAIVY 185          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig157.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FYQ1_ECTSI2.590e-2037.11CID domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JRI0_9PHAE5.370e-2036.27CID domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CAK0_9STRA2.990e-1531.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.10coord: 311..375
e-value: 1.7E-5
score: 25.9
NoneNo IPR availableGENE3D1.10.472.10coord: 376..448
e-value: 1.7E-5
score: 25.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 800..819
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 546..924
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 693..725
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 857..872
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..173
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 576..594
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 500..533
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..249
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 763..777
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 546..569
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 628..657
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..255
NoneNo IPR availablePANTHERPTHR48126RE24507Pcoord: 11..911
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 264..375

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig157contigP-wetherbeei_contig157:3649..6519 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig157.6.1mRNA_P-wetherbeei_contig157.6.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig157 3377..6550 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig157.6.1 ID=prot_P-wetherbeei_contig157.6.1|Name=mRNA_P-wetherbeei_contig157.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=925bp
MAVNDIAATAPPRSQPPLPQPAFGMLPAAVAPTKVDGKRPQSSGGWGASV
KGSGRAWLDTAKRQRVVSEGSPGGTSSPALRPPPDDTDMTDLFVEEYNRS
GLEGEGESAYSAIEAEPLLETPALATAAARTAATAAAEREPTAESALASG
DGDGDRSGLGGGDDGGGITGGTAATAAAEATAVTNVKQEDGGATATGDGI
DDGQALPVVTPSPDGAAAAPDMSPEGAGAAADADDDDAAVESDEDGDGDA
PSDPAARRRFRAVKFEACHMIRALVLGASLTPAASFTAFHLLHHYQWMCG
VPREEERLLPALCAACVFLAGKAEDPSCNKWGKLALVVAALRDGLPPHRG
GDRVRKSAVLEFEGRLLLSRGYDLGIRHPSECVAVILRRLRAPPEMHGPV
LEVLESPVYTHDSLCLEEEPEAAVAAAVLYASCLHAVAVPVDWDRTLKLE
RRRVFYFFERMLRTRLRLRAAAARYDPSYLTGAATHERLAAAWAERHRRD
REYKKEGKRQDRDEPRRRASEPPPLHNRDRHERRCERRCGRHDRHDRHSD
GDGDSDAGGSDDDGARFSDDGGRGGSGGNGRRRDGGRDVRPGTRSDHGLS
SAGTAAAFARTSPGEAPGDDTRGPSEWGAASPPPPPLATPPPLPMAPSLP
GSSLQQPPLPPSGVHAGQDGPFGRPRPDQPGQYPGPALPPWQGQGQGSPQ
QQGYQPTPSSLLLPQQQQHRQLPLPSHHHQPQGPGSHHQPPPQQHLGISL
PPRQLPRPPGFVDFGQQQQQQQQPPPQHGHGVGPRYGGGPQHGGMTMGFP
PGQRQQQQLPPQQHGQHGTFGGSRLMHPLQPQQQGRPFTGGPLPHEMHRM
GPGALPPPHQQQQQQQRHGVGSQYGGGPQYGGGPMGFLSGQGPLPQQGPP
PGPGAGRMPGPMGWDSSLRPGQLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036915Cyclin-like_sf