prot_P-wetherbeei_contig15692.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig15692.1.1
Unique Nameprot_P-wetherbeei_contig15692.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length154
Homology
BLAST of mRNA_P-wetherbeei_contig15692.1.1 vs. uniprot
Match: D7FLF8_ECTSI (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF8_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 2.250e-46
Identity = 94/154 (61.04%), Postives = 112/154 (72.73%), Query Frame = 0
Query:    1 GGNYGQFEIGDHGTLRFRGGSGGERDVFALNLKDVSQCVLPGNNRKGNDVELQFHESDAMDNQAEDALVEMRLCLPAGEAGGDDEPSAAEQFQEQVMERANIRDVKGAVLVEFDRDQGTFLTPRGRYTIEMYGGFMRMHGSKYDYKIQYDDINR 154
            GGNYG  E+ D+  +RF   S G + +F LN+KDVSQCV+PG  +K NDVELQ HESDA D Q ED LV +R+ LP  +   D E S AE  Q  VMERANI DVKG VLVEF+  QGTF  PRGRY++EMY  FMRMHGS+YDYKIQY+DI++
Sbjct:   99 GGNYGDIEVLDN-IVRF---SSGNKTLFDLNIKDVSQCVMPGV-KKSNDVELQLHESDATD-QTEDTLVAIRVTLPEKDEDTD-ERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISK 245          
BLAST of mRNA_P-wetherbeei_contig15692.1.1 vs. uniprot
Match: A0A6H5L083_9PHAE (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L083_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 3.350e-43
Identity = 84/130 (64.62%), Postives = 98/130 (75.38%), Query Frame = 0
Query:   25 RDVFALNLKDVSQCVLPGNNRKGNDVELQFHESDAMDNQAEDALVEMRLCLPAGEAGGDDEPSAAEQFQEQVMERANIRDVKGAVLVEFDRDQGTFLTPRGRYTIEMYGGFMRMHGSKYDYKIQYDDINR 154
            R +F LN+KDVSQCV+PG  +K NDVELQ HESDA D Q ED LV +R+ LP  +   D E S AE  Q  VMERANI DVKG VLVEF+  QGTF  PRGRY++EMY  FMRMHGS+YDYKIQY+DI++
Sbjct:    3 RTLFDLNIKDVSQCVMPGV-KKSNDVELQLHESDATD-QTEDTLVAIRVTLPEKDEDTD-ERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISK 129          
BLAST of mRNA_P-wetherbeei_contig15692.1.1 vs. uniprot
Match: A0A812V1D9_SYMMI (FACT complex subunit SSRP1 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812V1D9_SYMMI)

HSP 1 Score: 152 bits (385), Expect = 6.780e-41
Identity = 82/162 (50.62%), Postives = 111/162 (68.52%), Query Frame = 0
Query:    1 GGNYGQFEIGDHGTLRFRGGSGGERDVFALNLKDVSQCVLPGNNRKGNDVELQFHESDAMDNQAEDALVEMRLCLPAGEAG--------GDDEPSAAEQFQEQVMERANIRDVKGAVLVEFDRDQGTFLTPRGRYTIEMYGGFMRMHGSKYDYKIQYDDINR 154
            GGN+G  E+ D+  +     +G  + VF L L +VSQCVLPGNN+  ++VE+QFHE+D  D + ED LV++RL  P  E           ++E + A+ FQ+++MER  IR V G V+ EF +DQGTF+TPRGRY I+MY  FMRMHG+KYDYKI+YDDI+R
Sbjct:  118 GGNFGDIELDDNSMVMKSAKTG--KQVFDLKLTNVSQCVLPGNNK--DEVEIQFHEADTGDRE-EDMLVQIRLRFPTVEQADVEDRDEDAEEEETNAQIFQKKIMERGMIRSVTGNVIAEFSQDQGTFVTPRGRYAIQMYSTFMRMHGAKYDYKIKYDDIDR 274          
BLAST of mRNA_P-wetherbeei_contig15692.1.1 vs. uniprot
Match: A0A7S0C3Q8_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C3Q8_9STRA)

HSP 1 Score: 142 bits (357), Expect = 7.090e-40
Identity = 68/129 (52.71%), Postives = 97/129 (75.19%), Query Frame = 0
Query:   27 VFALNLKDVSQCVLPGNNRKGNDVELQFHESDAMDNQAEDALVEMRLCLPAG-EAGGDDEPSAAEQFQEQVMERANIRDVKGAVLVEFDRDQGTFLTPRGRYTIEMYGGFMRMHGSKYDYKIQYDDINR 154
            + +++L DVSQCVLPGN R  N++ELQFHESDA++  + D LV++R  +P   +   ++  ++AE F E++M +ANI++  G V+ EFD  +GTFLTPRGRYTIE+Y  F+R+ G+KYDYKI+YDDI R
Sbjct:    8 IISIDLTDVSQCVLPGNTR--NEIELQFHESDAVERNS-DQLVQIRFYVPPDPDTDPNENETSAEMFHERIMTKANIKNTSGNVICEFDESKGTFLTPRGRYTIELYDSFLRLRGNKYDYKIKYDDITR 133          
BLAST of mRNA_P-wetherbeei_contig15692.1.1 vs. uniprot
Match: A0A3F2RE26_9STRA (FACT complex subunit SSRP1 n=28 Tax=Peronosporaceae TaxID=4777 RepID=A0A3F2RE26_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.400e-36
Identity = 77/149 (51.68%), Postives = 100/149 (67.11%), Query Frame = 0
Query:   10 GDHGTLRFRGGSGGERDVFA----LNLKDVSQCVLPGNNRKGNDVELQFHESDAMDNQAEDALVEMRLCLPAGEAGGDDEPSAAEQFQEQVMERANIRDVKGAVLVEFDRDQGTFLTPRGRYTIEMYGGFMRMHGSKYDYKIQYDDINR 154
            G+ G ++F G +   RDV A    L L+ +SQC LPG N    +VELQFHE D +    E+ LVEMRL LP G+  G+DE   AE F+++V+E+ANIR V G  +V+ D   GTFLTPRGRY +E+YG F+RMHG  +DYKI Y +INR
Sbjct:   82 GNWGEMKFEGPNLNFRDVNASVMELPLEQISQCALPGKN----EVELQFHEDDTVAGD-EETLVEMRLYLPPGD--GEDEVVTAEDFRQEVLEKANIRSVMGKSIVDLDETIGTFLTPRGRYGVEIYGSFLRMHGKTFDYKIMYSNINR 223          
BLAST of mRNA_P-wetherbeei_contig15692.1.1 vs. uniprot
Match: A0A0P1AN61_PLAHL (FACT complex subunit SSRP1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AN61_PLAHL)

HSP 1 Score: 139 bits (349), Expect = 2.550e-35
Identity = 76/154 (49.35%), Postives = 102/154 (66.23%), Query Frame = 0
Query:    1 GGNYGQFEIGDHGTLRFRGGSGGERDVFALNLKDVSQCVLPGNNRKGNDVELQFHESDAMDNQAEDALVEMRLCLPAGEAGGDDEPSAAEQFQEQVMERANIRDVKGAVLVEFDRDQGTFLTPRGRYTIEMYGGFMRMHGSKYDYKIQYDDINR 154
            GGN+G  +  +   L FR  +     V  L L+ +SQC LPG +    +VELQFHE D +    E+ LVEMRL LP G+  G+DE  +AE+F+++V+E+ANIR V G  +V+ D   GTFLTPRGRY +E+YG F+RMHG  +DYKI Y +INR
Sbjct:  102 GGNWGDMKF-EGPNLNFRTANA---SVMELPLEQISQCALPGKH----EVELQFHEDDTVAGD-EETLVEMRLYLPPGD--GEDEVVSAEEFRQEVLEKANIRSVMGKSIVDLDETIGTFLTPRGRYGVEIYGSFLRMHGKTFDYKIMYSNINR 244          
BLAST of mRNA_P-wetherbeei_contig15692.1.1 vs. uniprot
Match: A0A6U3RIK7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RIK7_9STRA)

HSP 1 Score: 139 bits (349), Expect = 3.750e-35
Identity = 69/132 (52.27%), Postives = 98/132 (74.24%), Query Frame = 0
Query:   26 DVFALNLKDVSQCVLPGNNRKGNDVELQFHESDAMDNQAEDALVEMRLCLPAG---EAGGDDEPSAAEQFQEQVMERANIRDVKGAVLVEFDRDQGTFLTPRGRYTIEMYGGFMRMHGSKYDYKIQYDDINR 154
            ++ +L L +VSQCVLPGNNR  N++ELQFHESD ++    D LV +R+ +P     +   +D  + AE  Q+++M+ ANI++  G+V+VEFD  +GTFLTPRGRYTIE+Y  F+RM G+KYDYKI+YDDI++
Sbjct:  160 EMMSLQLAEVSQCVLPGNNR--NEIELQFHESDTVE-AGTDQLVGVRIYIPPDPDMDPQDNDVQTPAEILQQRIMKMANIKNTTGSVIVEFDESRGTFLTPRGRYTIELYDSFLRMRGNKYDYKIKYDDISK 288          
BLAST of mRNA_P-wetherbeei_contig15692.1.1 vs. uniprot
Match: A0A7S3Y0B3_HETAK (FACT complex subunit SSRP1 n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0B3_HETAK)

HSP 1 Score: 138 bits (348), Expect = 4.240e-35
Identity = 73/152 (48.03%), Postives = 102/152 (67.11%), Query Frame = 0
Query:    1 GGNYGQFEIGDHGTLRFRGGSGGERDVFALNLKDVSQCVLPGNNRKGNDVELQFHESDAMDNQAEDALVEMRLCLPAGEAGGDDEPSAAEQFQEQVMERANIRDVKGAVLVEFDRDQGTFLTPRGRYTIEMYGGFMRMHGSKYDYKIQYDDI 152
            GGNY  FE   +  +     +  E+ +  ++ + +SQCVLPGNN+K N VEL F   D     AE+ L  +RL +P GE   ++E + AE+FQ +V+ERANI  VKG VLVE  +++G FLTPRG+YT+E+Y  FMRM+G+KYDYKI+Y D+
Sbjct:   32 GGNYADFEFKGNRIVF----TVDEKHLLEIDAQAISQCVLPGNNKKDNTVELMFPIVDEGVGPAEERLTSLRLWVPPGE-DAEEEGTGAERFQAEVLERANIGKVKGDVLVELGKERGNFLTPRGKYTLELYQDFMRMYGAKYDYKIRYGDV 178          
BLAST of mRNA_P-wetherbeei_contig15692.1.1 vs. uniprot
Match: A0A7S2SJ65_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SJ65_9STRA)

HSP 1 Score: 137 bits (345), Expect = 4.970e-35
Identity = 68/132 (51.52%), Postives = 95/132 (71.97%), Query Frame = 0
Query:   26 DVFALNLKDVSQCVLPGNNRKGNDVELQFHESDAMDNQAEDALVEMRLCLPAG---EAGGDDEPSAAEQFQEQVMERANIRDVKGAVLVEFDRDQGTFLTPRGRYTIEMYGGFMRMHGSKYDYKIQYDDINR 154
            ++ ++ L +VSQCVLPGNNR  N++ELQFHESD ++    D LV +R  +P     +    D P++AE F +++M+ A I++  G V+VEFD ++GTFLTPRGRY IE+Y  F+RM G+KYDYKI+YDDI R
Sbjct:  150 EMMSMKLAEVSQCVLPGNNR--NEIELQFHESDTVE-AGTDQLVAIRFYIPPDPEMDPSDRDAPTSAEVFHQRIMKNAKIKNTAGDVIVEFDENKGTFLTPRGRYLIELYDSFLRMRGNKYDYKIKYDDIAR 278          
BLAST of mRNA_P-wetherbeei_contig15692.1.1 vs. uniprot
Match: A0A5D6XJ40_9STRA (FACT complex subunit SSRP1 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJ40_9STRA)

HSP 1 Score: 137 bits (344), Expect = 5.180e-35
Identity = 75/154 (48.70%), Postives = 99/154 (64.29%), Query Frame = 0
Query:    1 GGNYGQFEIGDHGTLRFRGGSGGERDVFALNLKDVSQCVLPGNNRKGNDVELQFHESDAMDNQAEDALVEMRLCLPAGEAGGDDEPSAAEQFQEQVMERANIRDVKGAVLVEFDRDQGTFLTPRGRYTIEMYGGFMRMHGSKYDYKIQYDDINR 154
            GGN+G  +  +   L FR     +  V  + L+ VSQC LPG N    +VELQFHE D +    E+ LVEMR+ LP G+  G D+   AE F+++V++RANIR V G  +V+ D   GTFLTPRGRY +E+YG F+RMHG  +DYKI Y +INR
Sbjct:  102 GGNWGDMKF-EGPNLNFRAN---DASVLEIPLEHVSQCALPGKN----EVELQFHEDDTVAGD-EETLVEMRVYLPPGD--GTDDVMTAELFRDEVLQRANIRAVAGKSIVDLDESMGTFLTPRGRYGVEIYGSFLRMHGKTFDYKIMYSNINR 244          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15692.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF8_ECTSI2.250e-4661.04FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sili... [more]
A0A6H5L083_9PHAE3.350e-4364.62FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sp. ... [more]
A0A812V1D9_SYMMI6.780e-4150.62FACT complex subunit SSRP1 n=1 Tax=Symbiodinium mi... [more]
A0A7S0C3Q8_9STRA7.090e-4052.71FACT complex subunit SSRP1 (Fragment) n=1 Tax=Prob... [more]
A0A3F2RE26_9STRA1.400e-3651.68FACT complex subunit SSRP1 n=28 Tax=Peronosporacea... [more]
A0A0P1AN61_PLAHL2.550e-3549.35FACT complex subunit SSRP1 n=1 Tax=Plasmopara hals... [more]
A0A6U3RIK7_9STRA3.750e-3552.27Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S3Y0B3_HETAK4.240e-3548.03FACT complex subunit SSRP1 n=2 Tax=Heterosigma aka... [more]
A0A7S2SJ65_9STRA4.970e-3551.52FACT complex subunit SSRP1 (Fragment) n=1 Tax=Euca... [more]
A0A5D6XJ40_9STRA5.180e-3548.70FACT complex subunit SSRP1 n=1 Tax=Pythium brassic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000969Structure-specific recognition proteinPRINTSPR00887SSRCOGNITIONcoord: 122..138
score: 50.0
coord: 144..154
score: 36.76
NoneNo IPR availableGENE3D2.30.29.150coord: 100..154
e-value: 1.4E-13
score: 52.7
NoneNo IPR availablePANTHERPTHR45849FACT COMPLEX SUBUNIT SSRP1coord: 24..154
NoneNo IPR availablePANTHERPTHR45849:SF1FACT COMPLEX SUBUNIT SSRP1coord: 24..154
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 119..154
IPR038167SSRP1 domain superfamilyGENE3D2.30.29.220coord: 1..84
e-value: 9.1E-10
score: 40.1
IPR024954SSRP1 domainPFAMPF03531SSrecogcoord: 1..77
e-value: 5.7E-12
score: 45.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15692contigP-wetherbeei_contig15692:145..1318 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15692.1.1mRNA_P-wetherbeei_contig15692.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig15692 145..1318 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig15692.1.1 ID=prot_P-wetherbeei_contig15692.1.1|Name=mRNA_P-wetherbeei_contig15692.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=154bp
GGNYGQFEIGDHGTLRFRGGSGGERDVFALNLKDVSQCVLPGNNRKGNDV
ELQFHESDAMDNQAEDALVEMRLCLPAGEAGGDDEPSAAEQFQEQVMERA
NIRDVKGAVLVEFDRDQGTFLTPRGRYTIEMYGGFMRMHGSKYDYKIQYD
DINR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000969SSrcognition
IPR038167SSRP1_sf
IPR024954SSRP1_dom