prot_P-wetherbeei_contig14943.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig14943.3.1
Unique Nameprot_P-wetherbeei_contig14943.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length156
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig14943.3.1 vs. uniprot
Match: A0A6A7MD68_9PROT (Redox-sensitive transcriptional activator SoxR n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A6A7MD68_9PROT)

HSP 1 Score: 243 bits (621), Expect = 4.550e-80
Identity = 120/148 (81.08%), Postives = 134/148 (90.54%), Query Frame = 0 
Query:    7 LSIGELSRRTGMSVSAIRFYEAHGLVTAIRSSGNQRRFLRADIRRLSFVLIAQRLGLTLAEVSAELATLPQKRAPTRQDWQKMSARIRGTLQQRIEMLERTRDLLDGCIGCGCLSLDRCALYNPGDRAASAGAGPRFLLGDRAKDFEE 154
            L+IGEL+RRTGMSVSAIRFYE+ GLV A+R+SGNQRRF+RADIRRLSF LIAQ+LGLTL+E+ AEL+TLPQ RAP RQDWQ +SARIRG LQ RI MLE+TRDLLDGCIGCGCLSL+ C LYNP DRAA AGAGPRFLLGDRA+DFEE
Sbjct:   38 LTIGELARRTGMSVSAIRFYESRGLVRAVRTSGNQRRFMRADIRRLSFALIAQQLGLTLSEIEAELSTLPQGRAPNRQDWQAISARIRGALQARINMLEKTRDLLDGCIGCGCLSLENCRLYNPNDRAARAGAGPRFLLGDRAQDFEE 185
[Close]
BLAST of mRNA_P-wetherbeei_contig14943.3.1 vs. uniprot
Match: A0A495RVK5_SPHMI (MerR family transcriptional regulator n=1 Tax=Sphingosinicella microcystinivorans TaxID=335406 RepID=A0A495RVK5_SPHMI)

HSP 1 Score: 231 bits (590), Expect = 9.380e-76
Identity = 114/146 (78.08%), Postives = 129/146 (88.36%), Query Frame = 0 
Query:    7 LSIGELSRRTGMSVSAIRFYEAHGLVTAIRSSGNQRRFLRADIRRLSFVLIAQRLGLTLAEVSAELATLPQKRAPTRQDWQKMSARIRGTLQQRIEMLERTRDLLDGCIGCGCLSLDRCALYNPGDRAASAGAGPRFLLGDRAKDF 152
            L+IGEL+RRTG+SVSAIRFYE  GLV++IR+ GNQRRFLR+DIRRLSF LIAQRLGLTLAE+ AEL+TLP  R PT+ DW ++S R+R  L  RI MLERTRDLLDGCIGCGCLSLDRCALYNPGDRAA AGAGPRFL+GDRA+DF
Sbjct:    6 LTIGELARRTGLSVSAIRFYEERGLVSSIRTGGNQRRFLRSDIRRLSFALIAQRLGLTLAEIEAELSTLPDGRVPTQADWTRISRRMRKALDARIAMLERTRDLLDGCIGCGCLSLDRCALYNPGDRAARAGAGPRFLMGDRAEDF 151
[Close]
BLAST of mRNA_P-wetherbeei_contig14943.3.1 vs. uniprot
Match: A0A521LVT7_9HYPH (Redox-sensitive transcriptional activator SoxR n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521LVT7_9HYPH)

HSP 1 Score: 225 bits (573), Expect = 5.420e-73
Identity = 111/149 (74.50%), Postives = 128/149 (85.91%), Query Frame = 0 
Query:    6 LLSIGELSRRTGMSVSAIRFYEAHGLVTAIRSSGNQRRFLRADIRRLSFVLIAQRLGLTLAEVSAELATLPQKRAPTRQDWQKMSARIRGTLQQRIEMLERTRDLLDGCIGCGCLSLDRCALYNPGDRAASAGAGPRFLLGDRAKDFEE 154
            ++SIG+L+RRTG+SV+AIRFYEA G +TAIRS GNQRRFLRADIRR SF LIAQ+LGLTLAE+ AEL TL   R PTR DWQ +S RIRG L+ R+ MLERTRDLLDGCIGCGCLSLDRCALYN GD+AA  GAGPR+LLG+RA+DF +
Sbjct:    1 MVSIGQLARRTGLSVAAIRFYEARGPLTAIRSGGNQRRFLRADIRRFSFALIAQQLGLTLAEIEAELTTLSLGRTPTRSDWQAISKRIRGALEARLHMLERTRDLLDGCIGCGCLSLDRCALYNRGDKAAVGGAGPRYLLGNRAQDFAD 149
[Close]
BLAST of mRNA_P-wetherbeei_contig14943.3.1 vs. uniprot
Match: A0A522CZX1_9CAUL (Redox-sensitive transcriptional activator SoxR n=1 Tax=Phenylobacterium sp. TaxID=1871053 RepID=A0A522CZX1_9CAUL)

HSP 1 Score: 223 bits (568), Expect = 1.840e-72
Identity = 111/151 (73.51%), Postives = 127/151 (84.11%), Query Frame = 0 
Query:    1 MPQAPLLSIGELSRRTGMSVSAIRFYEAHGLVTAIRSSGNQRRFLRADIRRLSFVLIAQRLGLTLAEVSAELATLPQKRAPTRQDWQKMSARIRGTLQQRIEMLERTRDLLDGCIGCGCLSLDRCALYNPGDRAASAGAGPRFLLGDRAKD 151
            MP    LSIG+L+RR G+SVSA+RFYEA GLV AIRS GNQRRF+R+DIRRLSF LIAQRLGLTLAE+ AEL+TLP  +AP+ QDW+ +S R+RG L  RI MLERTR+LLDGCIGCGCLSL+RCALYNP DRAA AGAGPR+LLGD   D
Sbjct:    1 MPPPATLSIGDLARRVGISVSAVRFYEARGLVRAIRSEGNQRRFMRSDIRRLSFALIAQRLGLTLAEIEAELSTLPLDQAPSAQDWRAISERMRGALDARIAMLERTRELLDGCIGCGCLSLERCALYNPADRAARAGAGPRYLLGDHWDD 151
[Close]
BLAST of mRNA_P-wetherbeei_contig14943.3.1 vs. uniprot
Match: A0A1H8XSF1_9PROT (MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR n=1 Tax=Rhodospirillales bacterium URHD0017 TaxID=1380357 RepID=A0A1H8XSF1_9PROT)

HSP 1 Score: 222 bits (566), Expect = 2.190e-72
Identity = 108/137 (78.83%), Postives = 123/137 (89.78%), Query Frame = 0 
Query:   18 MSVSAIRFYEAHGLVTAIRSSGNQRRFLRADIRRLSFVLIAQRLGLTLAEVSAELATLPQKRAPTRQDWQKMSARIRGTLQQRIEMLERTRDLLDGCIGCGCLSLDRCALYNPGDRAASAGAGPRFLLGDRAKDFEE 154
            MSVSAIRFYE+ GL+ A+R+SGNQRRFLR+DIRRLSF LIAQ+LGLTL+E+ AEL+ LPQ R PT QDWQ +SARIRG LQ RI+MLE+TRDLLDGCIGCGCLSLD+C LYNP DRAA AGAGPRFLLGDRA+DFE+
Sbjct:    1 MSVSAIRFYESRGLLRAVRTSGNQRRFLRSDIRRLSFALIAQQLGLTLSEIEAELSLLPQGRGPTHQDWQAISARIRGALQARIQMLEKTRDLLDGCIGCGCLSLDKCRLYNPNDRAARAGAGPRFLLGDRAQDFED 137
[Close]
BLAST of mRNA_P-wetherbeei_contig14943.3.1 vs. uniprot
Match: W0ALI0_9SPHN (HTH merR-type domain-containing protein n=1 Tax=Sphingomonas sanxanigenens DSM 19645 = NX02 TaxID=1123269 RepID=W0ALI0_9SPHN)

HSP 1 Score: 221 bits (562), Expect = 1.560e-71
Identity = 111/147 (75.51%), Postives = 126/147 (85.71%), Query Frame = 0 
Query:    1 MPQAPLLSIGELSRRTGMSVSAIRFYEAHGLVTAIRSSGNQRRFLRADIRRLSFVLIAQRLGLTLAEVSAELATLPQKRAPTRQDWQKMSARIRGTLQQRIEMLERTRDLLDGCIGCGCLSLDRCALYNPGDRAASAGAGPRFLLGD 147
            M Q+ LL+IGEL+RRTG+SVSAIRFYEA GLV+AIR+ GNQRRFLRADIRRLSF LIAQ+LGL+L E+ AELATLP  RAPT+ DW  +SARIRG + +RI ML+RTRD LDGCIGCGCLSL  CALYNP DRAA AGAGPRF+L D
Sbjct:    1 MAQSTLLTIGELARRTGLSVSAIRFYEARGLVSAIRTGGNQRRFLRADIRRLSFALIAQQLGLSLGEIEAELATLPHGRAPTQADWAAISARIRGAIDRRIAMLQRTRDRLDGCIGCGCLSLSNCALYNPEDRAARAGAGPRFVLHD 147
[Close]
BLAST of mRNA_P-wetherbeei_contig14943.3.1 vs. uniprot
Match: UPI0018F3451F (redox-sensitive transcriptional activator SoxR n=1 Tax=Sandaracinobacteroides hominis TaxID=2780086 RepID=UPI0018F3451F)

HSP 1 Score: 219 bits (558), Expect = 5.560e-71
Identity = 108/147 (73.47%), Postives = 125/147 (85.03%), Query Frame = 0 
Query:    6 LLSIGELSRRTGMSVSAIRFYEAHGLVTAIRSSGNQRRFLRADIRRLSFVLIAQRLGLTLAEVSAELATLPQKRAPTRQDWQKMSARIRGTLQQRIEMLERTRDLLDGCIGCGCLSLDRCALYNPGDRAASAGAGPRFLLGDRAKDF 152
            L+ IGEL+RRTG+SVSAIRFYEA GLV  IR++GNQRR+LR+DIRRLSF +IAQ+LGL+L+E++AELATLPQ RAPT+ DW+ +S  IR  L  RI MLE TRDLLDGCIGCGCLSLDRC LYNP DRA  AG GPRFLLG+RA DF
Sbjct:    3 LIPIGELARRTGLSVSAIRFYEARGLVEPIRTAGNQRRYLRSDIRRLSFAMIAQQLGLSLSEITAELATLPQGRAPTQADWEAISTHIRSRLDARIRMLENTRDLLDGCIGCGCLSLDRCKLYNPEDRANQAGPGPRFLLGNRASDF 149
[Close]
BLAST of mRNA_P-wetherbeei_contig14943.3.1 vs. uniprot
Match: A0A537LUD5_9PROT (Redox-sensitive transcriptional activator SoxR n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537LUD5_9PROT)

HSP 1 Score: 218 bits (556), Expect = 1.050e-70
Identity = 108/144 (75.00%), Postives = 124/144 (86.11%), Query Frame = 0 
Query:    4 APLLSIGELSRRTGMSVSAIRFYEAHGLVTAIRSSGNQRRFLRADIRRLSFVLIAQRLGLTLAEVSAELATLPQKRAPTRQDWQKMSARIRGTLQQRIEMLERTRDLLDGCIGCGCLSLDRCALYNPGDRAASAGAGPRFLLGD 147
            +PLL+IGEL+RRTG+SVSAIRFYEA GL++ IR++GNQRRFLR+DIRRLSF L+AQRLGLTL E+  ELA LP  RAPTR+DWQ +S RIR  L+ RI +LER RD LDGCIGCGCLSLDRCALYNP DRAA+ G GPRFLLGD
Sbjct:    2 SPLLTIGELARRTGLSVSAIRFYEAKGLLSPIRTAGNQRRFLRSDIRRLSFALVAQRLGLTLGEIEEELARLPLGRAPTREDWQSVSRRIRDRLETRIALLERMRDRLDGCIGCGCLSLDRCALYNPEDRAAATGPGPRFLLGD 145
[Close]
BLAST of mRNA_P-wetherbeei_contig14943.3.1 vs. uniprot
Match: A0A257UUA5_9PROT (Redox-sensitive transcriptional activator SoxR n=2 Tax=Acidiphilium TaxID=522 RepID=A0A257UUA5_9PROT)

HSP 1 Score: 210 bits (535), Expect = 2.150e-67
Identity = 103/150 (68.67%), Postives = 122/150 (81.33%), Query Frame = 0 
Query:    4 APLLSIGELSRRTGMSVSAIRFYEAHGLVTAIRSSGNQRRFLRADIRRLSFVLIAQRLGLTLAEVSAELATLPQKRAPTRQDWQKMSARIRGTLQQRIEMLERTRDLLDGCIGCGCLSLDRCALYNPGDRAASAGAGPRFLLGDRAKDFE 153
            A  LSIG+L+RRTG+SVSAIRFYE  GLVTA R +GNQRRF RADIRRLSF LIAQ+LGLT++E+ AELATLP+  AP+  DWQ +  R +  L  +I +L++T +LL GCIGCGCLSLDRCALYNP DRAA AG GPRFLLG++A DFE
Sbjct:    5 AATLSIGDLARRTGLSVSAIRFYETRGLVTATRGAGNQRRFARADIRRLSFALIAQQLGLTISEIEAELATLPRGHAPSAADWQAIGTRFQSALAAKITLLQKTHELLGGCIGCGCLSLDRCALYNPNDRAARAGPGPRFLLGNQASDFE 154
[Close]
BLAST of mRNA_P-wetherbeei_contig14943.3.1 vs. uniprot
Match: A0A4Y8ZSZ3_9SPHN (Redox-sensitive transcriptional activator SoxR n=1 Tax=Sphingomonas parva TaxID=2555898 RepID=A0A4Y8ZSZ3_9SPHN)

HSP 1 Score: 209 bits (531), Expect = 7.670e-67
Identity = 103/144 (71.53%), Postives = 123/144 (85.42%), Query Frame = 0 
Query:    4 APLLSIGELSRRTGMSVSAIRFYEAHGLVTAIRSSGNQRRFLRADIRRLSFVLIAQRLGLTLAEVSAELATLPQKRAPTRQDWQKMSARIRGTLQQRIEMLERTRDLLDGCIGCGCLSLDRCALYNPGDRAASAGAGPRFLLGD 147
            A LL+IG+++RRTG+SVSAIRFYEA GL++ IR+ GNQRRFL +DIRRLSF LIAQ+LGL++ ++ AELA LP  RAPTR+DWQ +SARIR  L  RI +L+RTRD LDGCIGCGCLSLDRCALYNP DRAA+ G GPR+LLGD
Sbjct:    2 ARLLTIGDMARRTGVSVSAIRFYEARGLLSPIRTGGNQRRFLPSDIRRLSFALIAQKLGLSVRDIEAELARLPLGRAPTREDWQALSARIRDRLDARITLLQRTRDRLDGCIGCGCLSLDRCALYNPDDRAAANGPGPRYLLGD 145
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14943.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A7MD68_9PROT4.550e-8081.08Redox-sensitive transcriptional activator SoxR n=2... [more]
A0A495RVK5_SPHMI9.380e-7678.08MerR family transcriptional regulator n=1 Tax=Sphi... [more]
A0A521LVT7_9HYPH5.420e-7374.50Redox-sensitive transcriptional activator SoxR n=1... [more]
A0A522CZX1_9CAUL1.840e-7273.51Redox-sensitive transcriptional activator SoxR n=1... [more]
A0A1H8XSF1_9PROT2.190e-7278.83MerR family transcriptional regulator, redox-sensi... [more]
W0ALI0_9SPHN1.560e-7175.51HTH merR-type domain-containing protein n=1 Tax=Sp... [more]
UPI0018F3451F5.560e-7173.47redox-sensitive transcriptional activator SoxR n=1... [more]
A0A537LUD5_9PROT1.050e-7075.00Redox-sensitive transcriptional activator SoxR n=1... [more]
A0A257UUA5_9PROT2.150e-6768.67Redox-sensitive transcriptional activator SoxR n=2... [more]
A0A4Y8ZSZ3_9SPHN7.670e-6771.53Redox-sensitive transcriptional activator SoxR n=1... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000551MerR-type HTH domainPRINTSPR00040HTHMERRcoord: 8..19
score: 29.58
coord: 42..62
score: 45.12
coord: 19..32
score: 46.07
IPR000551MerR-type HTH domainSMARTSM00422merrmega3coord: 7..75
e-value: 4.9E-22
score: 89.2
IPR000551MerR-type HTH domainPFAMPF00376MerRcoord: 8..44
e-value: 1.9E-13
score: 49.9
IPR000551MerR-type HTH domainPROSITEPS50937HTH_MERR_2coord: 6..74
score: 30.671091
IPR010211Redox-sensitive transcriptional activator SoxRTIGRFAMTIGR01950TIGR01950coord: 7..145
e-value: 8.9E-57
score: 188.8
IPR010211Redox-sensitive transcriptional activator SoxRPANTHERPTHR30204:SF0REDOX-SENSITIVE TRANSCRIPTIONAL ACTIVATOR SOXRcoord: 6..148
IPR010211Redox-sensitive transcriptional activator SoxRCDDcd01110HTH_SoxRcoord: 6..144
e-value: 1.86939E-71
score: 209.357
IPR015358Transcription regulator MerR, DNA bindingPFAMPF09278MerR-DNA-bindcoord: 49..114
e-value: 6.8E-14
score: 52.2
NoneNo IPR availableGENE3D1.10.1660.10coord: 2..130
e-value: 1.7E-32
score: 114.1
NoneNo IPR availablePANTHERPTHR30204REDOX-CYCLING DRUG-SENSING TRANSCRIPTIONAL ACTIVATOR SOXRcoord: 6..148
IPR009061Putative DNA-binding domain superfamilySUPERFAMILY46955Putative DNA-binding domaincoord: 7..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14943contigP-wetherbeei_contig14943:988..1455 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14943.3.1mRNA_P-wetherbeei_contig14943.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig14943 988..1455 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig14943.3.1 ID=prot_P-wetherbeei_contig14943.3.1|Name=mRNA_P-wetherbeei_contig14943.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=156bp
MPQAPLLSIGELSRRTGMSVSAIRFYEAHGLVTAIRSSGNQRRFLRADIR
RLSFVLIAQRLGLTLAEVSAELATLPQKRAPTRQDWQKMSARIRGTLQQR
IEMLERTRDLLDGCIGCGCLSLDRCALYNPGDRAASAGAGPRFLLGDRAK
DFEEG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000551MerR-type_HTH_dom
IPR010211Redox-sen_tscrpt-act_SoxR
IPR015358Tscrpt_reg_MerR_DNA-bd
IPR009061DNA-bd_dom_put_sf