prot_P-wetherbeei_contig14488.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig14488.1.1
Unique Name	prot_P-wetherbeei_contig14488.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	81

Homology

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BLAST of mRNA_P-wetherbeei_contig14488.1.1 vs. uniprot
Match: A0A6A7M659_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6A7M659_9PROT)

HSP 1 Score: 109 bits (273), Expect = 8.020e-27
Identity = 53/79 (67.09%), Postives = 70/79 (88.61%), Query Frame = 0

Query:    3 ILVFVSDPGEKIVSDLAVLSELFGFPPAEGRLVLALLSGATAPEFAQMVGVTYNTVRTLLSRAMARTGSRSQVELVLLV 81
            +L+F+SDP +++VSDLA+L ELFGFPP+E RLVLALL+G   P+FA+ VG++YNT+RTLL RAM RTG+RSQVELVL++
Sbjct:  292 VLLFISDPTQQLVSDLAILKELFGFPPSEARLVLALLNGIAPPDFAREVGLSYNTIRTLLVRAMDRTGTRSQVELVLVM 370

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BLAST of mRNA_P-wetherbeei_contig14488.1.1 vs. uniprot
Match: A0A512NS25_9HYPH (Helix-turn-helix transcriptional regulator n=1 Tax=Reyranella soli TaxID=1230389 RepID=A0A512NS25_9HYPH)

HSP 1 Score: 103 bits (257), Expect = 1.540e-24
Identity = 54/79 (68.35%), Postives = 65/79 (82.28%), Query Frame = 0

Query:    3 ILVFVSDPGEKIVSDLAVLSELFGFPPAEGRLVLALLSGATAPEFAQMVGVTYNTVRTLLSRAMARTGSRSQVELVLLV 81
            +LVFVSDP  K+ +DL+VL+ LFGFPPAE RLVLAL++G   PE A   GVTYNT+RT L+RAMART +RSQ+ELVLLV
Sbjct:  288 VLVFVSDPAAKMAADLSVLAGLFGFPPAEARLVLALMAGKQLPEIAIDTGVTYNTIRTQLARAMARTETRSQLELVLLV 366

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BLAST of mRNA_P-wetherbeei_contig14488.1.1 vs. uniprot
Match: A0A5C5TDN7_9HYPH (HTH luxR-type domain-containing protein n=1 Tax=Reyranella sp. CPCC 100927 TaxID=2599616 RepID=A0A5C5TDN7_9HYPH)

HSP 1 Score: 82.8 bits (203), Expect = 7.690e-17
Identity = 43/79 (54.43%), Postives = 55/79 (69.62%), Query Frame = 0

Query:    3 ILVFVSDPGEKIVSDLAVLSELFGFPPAEGRLVLALLSGATAPEFAQMVGVTYNTVRTLLSRAMARTGSRSQVELVLLV 81
            +LVF++DP      D   L +LF F PAE RLVLAL+SG   P F+   G++YNTVRTLL+RAM RT + SQ++LV LV
Sbjct:  292 VLVFIADPDATPAIDPVALEQLFDFTPAEARLVLALVSGVPLPAFSHQTGLSYNTVRTLLARAMTRTETNSQLQLVRLV 370

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BLAST of mRNA_P-wetherbeei_contig14488.1.1 vs. uniprot
Match: A0A259MD66_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillales bacterium 39-66-50 TaxID=1970570 RepID=A0A259MD66_9PROT)

HSP 1 Score: 82.0 bits (201), Expect = 1.390e-16
Identity = 42/78 (53.85%), Postives = 56/78 (71.79%), Query Frame = 0

Query:    4 LVFVSDPGEKIVSDLAVLSELFGFPPAEGRLVLALLSGATAPEFAQMVGVTYNTVRTLLSRAMARTGSRSQVELVLLV 81
            LVFV+DP E     +  L +LFGFP AE  L   LL+G + P++A+   ++YNT RTLL+RAMART +RSQ+ELVLL+
Sbjct:  293 LVFVADPAEGNAVGIGALRDLFGFPRAEAELAAGLLNGISLPDYARRSRISYNTARTLLARAMARTSTRSQLELVLLL 370

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BLAST of mRNA_P-wetherbeei_contig14488.1.1 vs. uniprot
Match: A0A5C8PSZ2_9HYPH (Helix-turn-helix transcriptional regulator n=1 Tax=Vineibacter terrae TaxID=2586908 RepID=A0A5C8PSZ2_9HYPH)

HSP 1 Score: 82.0 bits (201), Expect = 1.460e-16
Identity = 43/75 (57.33%), Postives = 54/75 (72.00%), Query Frame = 0

Query:    3 ILVFVSDPGEKIVSDLAVLSELFGFPPAEGRLVLALLSGATAPEFAQMVGVTYNTVRTLLSRAMARTGSRSQVEL 77
            +LVF++DP  +  +D A L  LF   PAE RLVLAL +G T P FA   G++YNTVRTLL+RAMART + SQ+EL
Sbjct:  292 VLVFIADPQARPDTDPAALMALFDLTPAEARLVLALANGVTLPAFASQAGLSYNTVRTLLARAMARTQTSSQLEL 366

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BLAST of mRNA_P-wetherbeei_contig14488.1.1 vs. uniprot
Match: A0A512NS06_9HYPH (Transcriptional regulator n=2 Tax=Reyranella soli TaxID=1230389 RepID=A0A512NS06_9HYPH)

HSP 1 Score: 64.7 bits (156), Expect = 2.330e-10
Identity = 34/75 (45.33%), Postives = 49/75 (65.33%), Query Frame = 0

Query:    4 LVFVSDPGEKIVSDLAVLSELFGFPPAEGRLVLALLSGATAPEFAQMVGVTYNTVRTLLSRAMARTGSRSQVELV 78
            ++ V+DP      DL  L  LFGF PAE RLV  L+SG + P+ A+ +G+ + T RT L+RA A+T + SQ++LV
Sbjct:  285 MLIVTDPDADPQLDLQALKALFGFTPAEARLVNLLVSGRSLPDVAKELGIGFETARTHLARARAKTETTSQIDLV 359

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BLAST of mRNA_P-wetherbeei_contig14488.1.1 vs. uniprot
Match: A0A521QPL5_9HYPH (HTH luxR-type domain-containing protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521QPL5_9HYPH)

HSP 1 Score: 62.4 bits (150), Expect = 1.560e-9
Identity = 34/79 (43.04%), Postives = 50/79 (63.29%), Query Frame = 0

Query:    3 ILVFVSDPGEKIVSDLAVLSELFGFPPAEGRLVLALLSGATAPEFAQMVGVTYNTVRTLLSRAMARTGSRSQVELVLLV 81
            +++ ++DP      +   LS LFGF PAE RLV  L +G + P  A+ +GV++ T RT L+ A A+T + SQV+LV LV
Sbjct:  296 VMLIITDPETARTVEPRTLSALFGFTPAEARLVGLLTTGLSLPAIAKRLGVSFETARTQLASARAKTDTASQVDLVRLV 374

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BLAST of mRNA_P-wetherbeei_contig14488.1.1 vs. uniprot
Match: UPI0005C284A4 (helix-turn-helix transcriptional regulator n=1 Tax=Reyranella massiliensis TaxID=445220 RepID=UPI0005C284A4)

HSP 1 Score: 62.4 bits (150), Expect = 1.560e-9
Identity = 36/79 (45.57%), Postives = 50/79 (63.29%), Query Frame = 0

Query:    3 ILVFVSDPGEKIVSDLAVLSELFGFPPAEGRLVLALLSGATAPEFAQMVGVTYNTVRTLLSRAMARTGSRSQVELVLLV 81
            +++ V+DP      +  VLS LFG  PAE RLV  L +G   P  A+ +GV++ TVRT L+ A A+T + SQV+LV LV
Sbjct:  296 VMLIVTDPEAAPRIEPRVLSTLFGLTPAEARLVSLLAAGLPLPAIAKRLGVSFETVRTQLATARAKTDTASQVDLVRLV 374

[Close]

BLAST of mRNA_P-wetherbeei_contig14488.1.1 vs. uniprot
Match: A0A5C8PSR5_9HYPH (HTH luxR-type domain-containing protein n=1 Tax=Vineibacter terrae TaxID=2586908 RepID=A0A5C8PSR5_9HYPH)

HSP 1 Score: 61.2 bits (147), Expect = 4.040e-9
Identity = 32/75 (42.67%), Postives = 45/75 (60.00%), Query Frame = 0

Query:    4 LVFVSDPGEKIVSDLAVLSELFGFPPAEGRLVLALLSGATAPEFAQMVGVTYNTVRTLLSRAMARTGSRSQVELV 78
            +VF++DP      +  ++  L    PAE R+V  L SG   P+     G +YNTVRTLL+RAM +T + SQV+LV
Sbjct:  293 VVFINDPDGVPGPEAGLVQALLDLTPAEARVVAMLASGVPLPQIGAATGTSYNTVRTLLARAMTKTQTTSQVDLV 367

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BLAST of mRNA_P-wetherbeei_contig14488.1.1 vs. uniprot
Match: A0A2D6BN28_9DELT (HTH luxR-type domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D6BN28_9DELT)

HSP 1 Score: 58.2 bits (139), Expect = 4.110e-8
Identity = 33/77 (42.86%), Postives = 47/77 (61.04%), Query Frame = 0

Query:    5 VFVSDPGEKIVSDLAVLSELFGFPPAEGRLVLALLSGATAPEFAQMVGVTYNTVRTLLSRAMARTGSRSQVELVLLV 81
            +F++DP          L  L+G  PAE R V  +  GA+    A+++GVT++TVR  L RA A+TG+RSQ +LV LV
Sbjct:  191 LFLADPERSGQCAPGELEALYGLTPAEARTVRCVARGASVARSAEILGVTHHTVRFNLKRAFAKTGARSQAQLVRLV 267

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig14488.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig14488.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22


Match Name	E-value	Identity	Description
A0A6A7M659_9PROT	8.020e-27	67.09	Uncharacterized protein n=1 Tax=Rhodospirillales b...	[more]
A0A512NS25_9HYPH	1.540e-24	68.35	Helix-turn-helix transcriptional regulator n=1 Tax...	[more]
A0A5C5TDN7_9HYPH	7.690e-17	54.43	HTH luxR-type domain-containing protein n=1 Tax=Re...	[more]
A0A259MD66_9PROT	1.390e-16	53.85	Uncharacterized protein n=1 Tax=Rhodospirillales b...	[more]
A0A5C8PSZ2_9HYPH	1.460e-16	57.33	Helix-turn-helix transcriptional regulator n=1 Tax...	[more]
A0A512NS06_9HYPH	2.330e-10	45.33	Transcriptional regulator n=2 Tax=Reyranella soli ...	[more]
A0A521QPL5_9HYPH	1.560e-9	43.04	HTH luxR-type domain-containing protein n=1 Tax=Re...	[more]
UPI0005C284A4	1.560e-9	45.57	helix-turn-helix transcriptional regulator n=1 Tax...	[more]
A0A5C8PSR5_9HYPH	4.040e-9	42.67	HTH luxR-type domain-containing protein n=1 Tax=Vi...	[more]
A0A2D6BN28_9DELT	4.110e-8	42.86	HTH luxR-type domain-containing protein n=1 Tax=De...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000792	Transcription regulator LuxR, C-terminal	SMART	SM00421	luxrmega5	coord: 24..81 e-value: 7.2E-4 score: 24.5
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 23..81 e-value: 1.7E-7 score: 32.5
IPR016032	Signal transduction response regulator, C-terminal effector	SUPERFAMILY	46894	C-terminal effector domain of the bipartite response regulators	coord: 16..80

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig14488	contig	P-wetherbeei_contig14488:212..454 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig14488.1.1	mRNA_P-wetherbeei_contig14488.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig14488 212..454 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig14488.1.1 ID=prot_P-wetherbeei_contig14488.1.1|Name=mRNA_P-wetherbeei_contig14488.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=81bp
SEILVFVSDPGEKIVSDLAVLSELFGFPPAEGRLVLALLSGATAPEFAQM
VGVTYNTVRTLLSRAMARTGSRSQVELVLLV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000792	Tscrpt_reg_LuxR_C
IPR036388	WH-like_DNA-bd_sf
IPR016032	Sig_transdc_resp-reg_C-effctor