prot_P-wetherbeei_contig14038.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig14038.3.1
Unique Nameprot_P-wetherbeei_contig14038.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length128
Homology
BLAST of mRNA_P-wetherbeei_contig14038.3.1 vs. uniprot
Match: A0A3B9NVM8_9PROT (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Gallionellaceae bacterium TaxID=2052162 RepID=A0A3B9NVM8_9PROT)

HSP 1 Score: 173 bits (438), Expect = 4.130e-53
Identity = 85/118 (72.03%), Postives = 101/118 (85.59%), Query Frame = 0
Query:    1 ADVRIHAVCDALRGAAALGDIGKHFPDSDPGYKNADSRVLLRAVAGKLLAAGYVVANLDSTIIAQAPKMAPHIPLMVLNLAADLNVEPGCISVKATTTERLGFTGRGEGIAAQAIALL 118
            ADV +HAVCDA+ GAAALGDIGKHF D+D  YK+ DSR+LLR VAGK+  AG+ V N+D+TIIAQAPKMAPHIP MV N+AADL +E   ++VKATTTE+LG+TGRGEGIAAQA+ALL
Sbjct:   37 ADVLLHAVCDAILGAAALGDIGKHFSDTDAKYKDIDSRLLLRVVAGKIREAGFRVGNVDATIIAQAPKMAPHIPQMVANIAADLGIEQTAVNVKATTTEQLGYTGRGEGIAAQAVALL 154          
BLAST of mRNA_P-wetherbeei_contig14038.3.1 vs. uniprot
Match: A0A6M4GYM6_9PROT (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Usitatibacter rugosus TaxID=2732067 RepID=A0A6M4GYM6_9PROT)

HSP 1 Score: 172 bits (437), Expect = 5.670e-53
Identity = 86/118 (72.88%), Postives = 101/118 (85.59%), Query Frame = 0
Query:    1 ADVRIHAVCDALRGAAALGDIGKHFPDSDPGYKNADSRVLLRAVAGKLLAAGYVVANLDSTIIAQAPKMAPHIPLMVLNLAADLNVEPGCISVKATTTERLGFTGRGEGIAAQAIALL 118
            ADV +HA+CDAL GAA+LGDIGKHFPDSDP YK ADSR LLRAVA  + + GY V N+D+TIIA+AP+MAPHI  M LN+AADLN++P  ++VKATTTE+LGFTGRGEGIAAQAI LL
Sbjct:   37 ADVLLHALCDALLGAASLGDIGKHFPDSDPRYKGADSRELLRAVASLVSSRGYRVENVDATIIAEAPRMAPHIGQMCLNIAADLNLQPDQVNVKATTTEKLGFTGRGEGIAAQAICLL 154          
BLAST of mRNA_P-wetherbeei_contig14038.3.1 vs. uniprot
Match: A0A6L9L4R0_9PROT (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Ferrovum sp. TaxID=2609467 RepID=A0A6L9L4R0_9PROT)

HSP 1 Score: 172 bits (437), Expect = 6.440e-53
Identity = 85/118 (72.03%), Postives = 98/118 (83.05%), Query Frame = 0
Query:    1 ADVRIHAVCDALRGAAALGDIGKHFPDSDPGYKNADSRVLLRAVAGKLLAAGYVVANLDSTIIAQAPKMAPHIPLMVLNLAADLNVEPGCISVKATTTERLGFTGRGEGIAAQAIALL 118
            ADV +HAVCDAL GA ALGDIG+HFPDSD  YKNADSRVLLR V   + AAG+V  N+D+TIIAQAP+MAPHIP M+ NLAADL V    +++KATTTE+LGFTGRGEGIAAQA+ LL
Sbjct:   37 ADVLLHAVCDALLGAIALGDIGRHFPDSDAAYKNADSRVLLRQVVALIHAAGFVPINVDATIIAQAPRMAPHIPRMITNLAADLGVSEDVVNIKATTTEKLGFTGRGEGIAAQAVCLL 154          
BLAST of mRNA_P-wetherbeei_contig14038.3.1 vs. uniprot
Match: A0A7Y5DGG5_9PROT (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Sideroxydans sp. TaxID=2067989 RepID=A0A7Y5DGG5_9PROT)

HSP 1 Score: 171 bits (432), Expect = 4.080e-52
Identity = 83/118 (70.34%), Postives = 99/118 (83.90%), Query Frame = 0
Query:    1 ADVRIHAVCDALRGAAALGDIGKHFPDSDPGYKNADSRVLLRAVAGKLLAAGYVVANLDSTIIAQAPKMAPHIPLMVLNLAADLNVEPGCISVKATTTERLGFTGRGEGIAAQAIALL 118
            ADV +HA+CDAL GAAALGDIGKHF D+D  +K+ DSR+LLR VA K+ + GY V N+D+TIIAQAPKMAPHIP MV N+AADL +   C++VKATTTE LG+TGRGEGIAAQA+ALL
Sbjct:   37 ADVLLHAICDALLGAAALGDIGKHFADTDAKFKDIDSRILLRDVARKIESVGYRVGNVDATIIAQAPKMAPHIPTMVANIAADLGIGASCVNVKATTTEHLGYTGRGEGIAAQAVALL 154          
BLAST of mRNA_P-wetherbeei_contig14038.3.1 vs. uniprot
Match: A0A7X4W5W8_9GAMM (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=3 Tax=Halomonas TaxID=2745 RepID=A0A7X4W5W8_9GAMM)

HSP 1 Score: 170 bits (430), Expect = 1.400e-51
Identity = 83/119 (69.75%), Postives = 99/119 (83.19%), Query Frame = 0
Query:    2 DVRIHAVCDALRGAAALGDIGKHFPDSDPGYKNADSRVLLRAVAGKLLAAGYVVANLDSTIIAQAPKMAPHIPLMVLNLAADLNVEPGCISVKATTTERLGFTGRGEGIAAQAIALLGP 120
            DV +HA+ DAL GA ALGDIG+HFPD+DP +K ADSR LLR V   + AAGY V NLD+T++AQAPKMAPH+  M  N+AADL+VEPG ++VKATTTERLGFTGRGEGIAA+A+ALL P
Sbjct:   38 DVLLHAISDALLGACALGDIGRHFPDTDPAWKGADSRDLLRRVVALVHAAGYRVGNLDATLMAQAPKMAPHVEAMAANVAADLDVEPGAVNVKATTTERLGFTGRGEGIAAEAVALLLP 156          
BLAST of mRNA_P-wetherbeei_contig14038.3.1 vs. uniprot
Match: D5CUS1_SIDLE (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=5 Tax=root TaxID=1 RepID=D5CUS1_SIDLE)

HSP 1 Score: 169 bits (428), Expect = 1.410e-51
Identity = 84/118 (71.19%), Postives = 99/118 (83.90%), Query Frame = 0
Query:    1 ADVRIHAVCDALRGAAALGDIGKHFPDSDPGYKNADSRVLLRAVAGKLLAAGYVVANLDSTIIAQAPKMAPHIPLMVLNLAADLNVEPGCISVKATTTERLGFTGRGEGIAAQAIALL 118
            ADV +HA+CDAL GAAALGDIGKHF D+D  YK+ DSR+LLR VA K+ AAGY + N+D+TIIAQAPKMAPHIP MV N+AADL +    ++VKATTTE LG+TGRGEGIAAQA+ALL
Sbjct:   37 ADVLLHAICDALLGAAALGDIGKHFADTDAKYKDIDSRLLLRDVAKKIEAAGYRIGNVDATIIAQAPKMAPHIPQMVTNIAADLGIAHHAVNVKATTTEHLGYTGRGEGIAAQAVALL 154          
BLAST of mRNA_P-wetherbeei_contig14038.3.1 vs. uniprot
Match: A0A1F4BWX2_9PROT (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_65_24 TaxID=1797489 RepID=A0A1F4BWX2_9PROT)

HSP 1 Score: 169 bits (429), Expect = 1.450e-51
Identity = 83/122 (68.03%), Postives = 101/122 (82.79%), Query Frame = 0
Query:    1 ADVRIHAVCDALRGAAALGDIGKHFPDSDPGYKNADSRVLLRAVAGKLLAAGYVVANLDSTIIAQAPKMAPHIPLMVLNLAADLNVEPGCISVKATTTERLGFTGRGEGIAAQAIALLGPRP 122
            ADV +HA+ DA+ GAAALGD+G+HFPD+DP Y+NADSRVLLRA A K+  AG+VV N+D+TIIAQAPKMAPH+  MV N+AADL + PG ++VKA TTE LGF GRGEGIAA+A+ALL   P
Sbjct:   39 ADVLLHAITDAVLGAAALGDVGRHFPDTDPRYRNADSRVLLRAAARKVHEAGWVVVNVDATIIAQAPKMAPHVAAMVNNIAADLGIAPGHVNVKAKTTEGLGFAGRGEGIAAEAVALLNYAP 160          
BLAST of mRNA_P-wetherbeei_contig14038.3.1 vs. uniprot
Match: UPI000DB9B80A (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Marinimicrobium alkaliphilum TaxID=2202654 RepID=UPI000DB9B80A)

HSP 1 Score: 169 bits (427), Expect = 2.140e-51
Identity = 84/122 (68.85%), Postives = 98/122 (80.33%), Query Frame = 0
Query:    2 DVRIHAVCDALRGAAALGDIGKHFPDSDPGYKNADSRVLLRAVAGKLLAAGYVVANLDSTIIAQAPKMAPHIPLMVLNLAADLNVEPGCISVKATTTERLGFTGRGEGIAAQAIALLGPRPT 123
            DV +HA+CDAL GAAA+GDIG+HFPD+DP Y+NADSR LLR V  KL AAG+ + N D T++AQAP+MA HI  MV N+AADL V PG I+VKATTTERLGFTGR EGIAAQA+ LL P  T
Sbjct:   38 DVLLHALCDALLGAAAMGDIGRHFPDTDPQYRNADSRALLRMVYAKLKAAGWRLGNADMTVVAQAPRMARHIDAMVANIAADLEVAPGQINVKATTTERLGFTGREEGIAAQAVVLLNPVQT 159          
BLAST of mRNA_P-wetherbeei_contig14038.3.1 vs. uniprot
Match: UPI001679DFB7 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Halomonas qijiaojingensis TaxID=980347 RepID=UPI001679DFB7)

HSP 1 Score: 169 bits (427), Expect = 2.500e-51
Identity = 83/120 (69.17%), Postives = 96/120 (80.00%), Query Frame = 0
Query:    2 DVRIHAVCDALRGAAALGDIGKHFPDSDPGYKNADSRVLLRAVAGKLLAAGYVVANLDSTIIAQAPKMAPHIPLMVLNLAADLNVEPGCISVKATTTERLGFTGRGEGIAAQAIALLGPR 121
            DV +HA+CDAL GA ALGDIG+HFPDSDP +  ADSR LLR V   + A GY V NLD+T+IAQAPKMAPHI  MV ++A DL V PG ++VKATTTERLGFTGRGEGIAA+A+ LL PR
Sbjct:   40 DVLLHAICDALLGACALGDIGRHFPDSDPAWAGADSRDLLRHVVELVAARGYRVGNLDATLIAQAPKMAPHIEAMVAHIAEDLKVSPGAVNVKATTTERLGFTGRGEGIAAEAVVLLQPR 159          
BLAST of mRNA_P-wetherbeei_contig14038.3.1 vs. uniprot
Match: UPI001BB8E5F9 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Sulfuricella sp. TaxID=2099377 RepID=UPI001BB8E5F9)

HSP 1 Score: 168 bits (425), Expect = 4.730e-51
Identity = 82/118 (69.49%), Postives = 94/118 (79.66%), Query Frame = 0
Query:    1 ADVRIHAVCDALRGAAALGDIGKHFPDSDPGYKNADSRVLLRAVAGKLLAAGYVVANLDSTIIAQAPKMAPHIPLMVLNLAADLNVEPGCISVKATTTERLGFTGRGEGIAAQAIALL 118
            ADV +HA+CDAL GAAALGDIG+HF DSDP YK  DSR LLR     L   GY + NLD+TI+AQAPKMAPHIP MV N+A DL V P C++VKATTTE+LG+TGRGEGIAAQA+ LL
Sbjct:   38 ADVLLHAICDALLGAAALGDIGRHFSDSDPRYKGIDSRELLRETMRLLREQGYNLVNLDTTIVAQAPKMAPHIPTMVANIAEDLGVAPSCVNVKATTTEKLGYTGRGEGIAAQAVCLL 155          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14038.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3B9NVM8_9PROT4.130e-5372.032-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A6M4GYM6_9PROT5.670e-5372.882-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A6L9L4R0_9PROT6.440e-5372.032-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A7Y5DGG5_9PROT4.080e-5270.342-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A7X4W5W8_9GAMM1.400e-5169.752-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
D5CUS1_SIDLE1.410e-5171.192-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A1F4BWX2_9PROT1.450e-5168.032-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
UPI000DB9B80A2.140e-5168.852-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
UPI001679DFB72.500e-5169.172-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
UPI001BB8E5F94.730e-5169.492-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthasePFAMPF02542YgbBcoord: 1..118
e-value: 1.1E-42
score: 145.9
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseTIGRFAMTIGR00151TIGR00151coord: 1..118
e-value: 3.5E-44
score: 148.6
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthasePANTHERPTHR431812-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE, CHLOROPLASTICcoord: 1..118
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseCDDcd00554MECDP_synthasecoord: 1..118
e-value: 1.22194E-61
score: 183.8
IPR0365712-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamilyGENE3D3.30.1330.50coord: 1..121
e-value: 2.1E-48
score: 166.6
IPR0365712-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamilySUPERFAMILY69765IpsF-likecoord: 1..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14038contigP-wetherbeei_contig14038:1377..1760 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14038.3.1mRNA_P-wetherbeei_contig14038.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig14038 1377..1760 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig14038.3.1 ID=prot_P-wetherbeei_contig14038.3.1|Name=mRNA_P-wetherbeei_contig14038.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=128bp
ADVRIHAVCDALRGAAALGDIGKHFPDSDPGYKNADSRVLLRAVAGKLLA
AGYVVANLDSTIIAQAPKMAPHIPLMVLNLAADLNVEPGCISVKATTTER
LGFTGRGEGIAAQAIALLGPRPTGSPG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003526MECDP_synthase
IPR036571MECDP_synthase_sf