mRNA_P-wetherbeei_contig14038.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14038.3.1 vs. uniprot
Match: A0A3B9NVM8_9PROT (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Gallionellaceae bacterium TaxID=2052162 RepID=A0A3B9NVM8_9PROT) HSP 1 Score: 173 bits (438), Expect = 4.130e-53 Identity = 85/118 (72.03%), Postives = 101/118 (85.59%), Query Frame = 1
Query: 1 ADVRIHAVCDALRGAAALGDIGKHFPDSDPGYKNADSRVLLRAVAGKLLAAGYVVANLDSTIIAQAPKMAPHIPLMVLNLAADLNVEPGCISVKATTTERLGFTGRGEGIAAQAIALL 354
ADV +HAVCDA+ GAAALGDIGKHF D+D YK+ DSR+LLR VAGK+ AG+ V N+D+TIIAQAPKMAPHIP MV N+AADL +E ++VKATTTE+LG+TGRGEGIAAQA+ALL
Sbjct: 37 ADVLLHAVCDAILGAAALGDIGKHFSDTDAKYKDIDSRLLLRVVAGKIREAGFRVGNVDATIIAQAPKMAPHIPQMVANIAADLGIEQTAVNVKATTTEQLGYTGRGEGIAAQAVALL 154
BLAST of mRNA_P-wetherbeei_contig14038.3.1 vs. uniprot
Match: A0A6M4GYM6_9PROT (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Usitatibacter rugosus TaxID=2732067 RepID=A0A6M4GYM6_9PROT) HSP 1 Score: 172 bits (437), Expect = 5.670e-53 Identity = 86/118 (72.88%), Postives = 101/118 (85.59%), Query Frame = 1
Query: 1 ADVRIHAVCDALRGAAALGDIGKHFPDSDPGYKNADSRVLLRAVAGKLLAAGYVVANLDSTIIAQAPKMAPHIPLMVLNLAADLNVEPGCISVKATTTERLGFTGRGEGIAAQAIALL 354
ADV +HA+CDAL GAA+LGDIGKHFPDSDP YK ADSR LLRAVA + + GY V N+D+TIIA+AP+MAPHI M LN+AADLN++P ++VKATTTE+LGFTGRGEGIAAQAI LL
Sbjct: 37 ADVLLHALCDALLGAASLGDIGKHFPDSDPRYKGADSRELLRAVASLVSSRGYRVENVDATIIAEAPRMAPHIGQMCLNIAADLNLQPDQVNVKATTTEKLGFTGRGEGIAAQAICLL 154
BLAST of mRNA_P-wetherbeei_contig14038.3.1 vs. uniprot
Match: A0A6L9L4R0_9PROT (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Ferrovum sp. TaxID=2609467 RepID=A0A6L9L4R0_9PROT) HSP 1 Score: 172 bits (437), Expect = 6.440e-53 Identity = 85/118 (72.03%), Postives = 98/118 (83.05%), Query Frame = 1
Query: 1 ADVRIHAVCDALRGAAALGDIGKHFPDSDPGYKNADSRVLLRAVAGKLLAAGYVVANLDSTIIAQAPKMAPHIPLMVLNLAADLNVEPGCISVKATTTERLGFTGRGEGIAAQAIALL 354
ADV +HAVCDAL GA ALGDIG+HFPDSD YKNADSRVLLR V + AAG+V N+D+TIIAQAP+MAPHIP M+ NLAADL V +++KATTTE+LGFTGRGEGIAAQA+ LL
Sbjct: 37 ADVLLHAVCDALLGAIALGDIGRHFPDSDAAYKNADSRVLLRQVVALIHAAGFVPINVDATIIAQAPRMAPHIPRMITNLAADLGVSEDVVNIKATTTEKLGFTGRGEGIAAQAVCLL 154
BLAST of mRNA_P-wetherbeei_contig14038.3.1 vs. uniprot
Match: A0A7Y5DGG5_9PROT (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Sideroxydans sp. TaxID=2067989 RepID=A0A7Y5DGG5_9PROT) HSP 1 Score: 171 bits (432), Expect = 4.080e-52 Identity = 83/118 (70.34%), Postives = 99/118 (83.90%), Query Frame = 1
Query: 1 ADVRIHAVCDALRGAAALGDIGKHFPDSDPGYKNADSRVLLRAVAGKLLAAGYVVANLDSTIIAQAPKMAPHIPLMVLNLAADLNVEPGCISVKATTTERLGFTGRGEGIAAQAIALL 354
ADV +HA+CDAL GAAALGDIGKHF D+D +K+ DSR+LLR VA K+ + GY V N+D+TIIAQAPKMAPHIP MV N+AADL + C++VKATTTE LG+TGRGEGIAAQA+ALL
Sbjct: 37 ADVLLHAICDALLGAAALGDIGKHFADTDAKFKDIDSRILLRDVARKIESVGYRVGNVDATIIAQAPKMAPHIPTMVANIAADLGIGASCVNVKATTTEHLGYTGRGEGIAAQAVALL 154
BLAST of mRNA_P-wetherbeei_contig14038.3.1 vs. uniprot
Match: A0A7X4W5W8_9GAMM (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=3 Tax=Halomonas TaxID=2745 RepID=A0A7X4W5W8_9GAMM) HSP 1 Score: 170 bits (430), Expect = 1.400e-51 Identity = 83/119 (69.75%), Postives = 99/119 (83.19%), Query Frame = 1
Query: 4 DVRIHAVCDALRGAAALGDIGKHFPDSDPGYKNADSRVLLRAVAGKLLAAGYVVANLDSTIIAQAPKMAPHIPLMVLNLAADLNVEPGCISVKATTTERLGFTGRGEGIAAQAIALLGP 360
DV +HA+ DAL GA ALGDIG+HFPD+DP +K ADSR LLR V + AAGY V NLD+T++AQAPKMAPH+ M N+AADL+VEPG ++VKATTTERLGFTGRGEGIAA+A+ALL P
Sbjct: 38 DVLLHAISDALLGACALGDIGRHFPDTDPAWKGADSRDLLRRVVALVHAAGYRVGNLDATLMAQAPKMAPHVEAMAANVAADLDVEPGAVNVKATTTERLGFTGRGEGIAAEAVALLLP 156
BLAST of mRNA_P-wetherbeei_contig14038.3.1 vs. uniprot
Match: D5CUS1_SIDLE (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=5 Tax=root TaxID=1 RepID=D5CUS1_SIDLE) HSP 1 Score: 169 bits (428), Expect = 1.410e-51 Identity = 84/118 (71.19%), Postives = 99/118 (83.90%), Query Frame = 1
Query: 1 ADVRIHAVCDALRGAAALGDIGKHFPDSDPGYKNADSRVLLRAVAGKLLAAGYVVANLDSTIIAQAPKMAPHIPLMVLNLAADLNVEPGCISVKATTTERLGFTGRGEGIAAQAIALL 354
ADV +HA+CDAL GAAALGDIGKHF D+D YK+ DSR+LLR VA K+ AAGY + N+D+TIIAQAPKMAPHIP MV N+AADL + ++VKATTTE LG+TGRGEGIAAQA+ALL
Sbjct: 37 ADVLLHAICDALLGAAALGDIGKHFADTDAKYKDIDSRLLLRDVAKKIEAAGYRIGNVDATIIAQAPKMAPHIPQMVTNIAADLGIAHHAVNVKATTTEHLGYTGRGEGIAAQAVALL 154
BLAST of mRNA_P-wetherbeei_contig14038.3.1 vs. uniprot
Match: A0A1F4BWX2_9PROT (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_65_24 TaxID=1797489 RepID=A0A1F4BWX2_9PROT) HSP 1 Score: 169 bits (429), Expect = 1.450e-51 Identity = 83/122 (68.03%), Postives = 101/122 (82.79%), Query Frame = 1
Query: 1 ADVRIHAVCDALRGAAALGDIGKHFPDSDPGYKNADSRVLLRAVAGKLLAAGYVVANLDSTIIAQAPKMAPHIPLMVLNLAADLNVEPGCISVKATTTERLGFTGRGEGIAAQAIALLGPRP 366
ADV +HA+ DA+ GAAALGD+G+HFPD+DP Y+NADSRVLLRA A K+ AG+VV N+D+TIIAQAPKMAPH+ MV N+AADL + PG ++VKA TTE LGF GRGEGIAA+A+ALL P
Sbjct: 39 ADVLLHAITDAVLGAAALGDVGRHFPDTDPRYRNADSRVLLRAAARKVHEAGWVVVNVDATIIAQAPKMAPHVAAMVNNIAADLGIAPGHVNVKAKTTEGLGFAGRGEGIAAEAVALLNYAP 160
BLAST of mRNA_P-wetherbeei_contig14038.3.1 vs. uniprot
Match: UPI000DB9B80A (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Marinimicrobium alkaliphilum TaxID=2202654 RepID=UPI000DB9B80A) HSP 1 Score: 169 bits (427), Expect = 2.140e-51 Identity = 84/122 (68.85%), Postives = 98/122 (80.33%), Query Frame = 1
Query: 4 DVRIHAVCDALRGAAALGDIGKHFPDSDPGYKNADSRVLLRAVAGKLLAAGYVVANLDSTIIAQAPKMAPHIPLMVLNLAADLNVEPGCISVKATTTERLGFTGRGEGIAAQAIALLGPRPT 369
DV +HA+CDAL GAAA+GDIG+HFPD+DP Y+NADSR LLR V KL AAG+ + N D T++AQAP+MA HI MV N+AADL V PG I+VKATTTERLGFTGR EGIAAQA+ LL P T
Sbjct: 38 DVLLHALCDALLGAAAMGDIGRHFPDTDPQYRNADSRALLRMVYAKLKAAGWRLGNADMTVVAQAPRMARHIDAMVANIAADLEVAPGQINVKATTTERLGFTGREEGIAAQAVVLLNPVQT 159
BLAST of mRNA_P-wetherbeei_contig14038.3.1 vs. uniprot
Match: UPI001679DFB7 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Halomonas qijiaojingensis TaxID=980347 RepID=UPI001679DFB7) HSP 1 Score: 169 bits (427), Expect = 2.500e-51 Identity = 83/120 (69.17%), Postives = 96/120 (80.00%), Query Frame = 1
Query: 4 DVRIHAVCDALRGAAALGDIGKHFPDSDPGYKNADSRVLLRAVAGKLLAAGYVVANLDSTIIAQAPKMAPHIPLMVLNLAADLNVEPGCISVKATTTERLGFTGRGEGIAAQAIALLGPR 363
DV +HA+CDAL GA ALGDIG+HFPDSDP + ADSR LLR V + A GY V NLD+T+IAQAPKMAPHI MV ++A DL V PG ++VKATTTERLGFTGRGEGIAA+A+ LL PR
Sbjct: 40 DVLLHAICDALLGACALGDIGRHFPDSDPAWAGADSRDLLRHVVELVAARGYRVGNLDATLIAQAPKMAPHIEAMVAHIAEDLKVSPGAVNVKATTTERLGFTGRGEGIAAEAVVLLQPR 159
BLAST of mRNA_P-wetherbeei_contig14038.3.1 vs. uniprot
Match: UPI001BB8E5F9 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Sulfuricella sp. TaxID=2099377 RepID=UPI001BB8E5F9) HSP 1 Score: 168 bits (425), Expect = 4.730e-51 Identity = 82/118 (69.49%), Postives = 94/118 (79.66%), Query Frame = 1
Query: 1 ADVRIHAVCDALRGAAALGDIGKHFPDSDPGYKNADSRVLLRAVAGKLLAAGYVVANLDSTIIAQAPKMAPHIPLMVLNLAADLNVEPGCISVKATTTERLGFTGRGEGIAAQAIALL 354
ADV +HA+CDAL GAAALGDIG+HF DSDP YK DSR LLR L GY + NLD+TI+AQAPKMAPHIP MV N+A DL V P C++VKATTTE+LG+TGRGEGIAAQA+ LL
Sbjct: 38 ADVLLHAICDALLGAAALGDIGRHFSDSDPRYKGIDSRELLRETMRLLREQGYNLVNLDTTIVAQAPKMAPHIPTMVANIAEDLGVAPSCVNVKATTTEKLGYTGRGEGIAAQAVCLL 155 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14038.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14038.3.1 >prot_P-wetherbeei_contig14038.3.1 ID=prot_P-wetherbeei_contig14038.3.1|Name=mRNA_P-wetherbeei_contig14038.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=128bp ADVRIHAVCDALRGAAALGDIGKHFPDSDPGYKNADSRVLLRAVAGKLLAback to top mRNA from alignment at P-wetherbeei_contig14038:1377..1760- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14038.3.1 ID=mRNA_P-wetherbeei_contig14038.3.1|Name=mRNA_P-wetherbeei_contig14038.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=384bp|location=Sequence derived from alignment at P-wetherbeei_contig14038:1377..1760- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14038:1377..1760- >mRNA_P-wetherbeei_contig14038.3.1 ID=mRNA_P-wetherbeei_contig14038.3.1|Name=mRNA_P-wetherbeei_contig14038.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=384bp|location=Sequence derived from alignment at P-wetherbeei_contig14038:1377..1760- (Phaeothamnion wetherbeei SAG_119_79)back to top |