prot_P-wetherbeei_contig140.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig140.3.1
Unique Nameprot_P-wetherbeei_contig140.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length654
Homology
BLAST of mRNA_P-wetherbeei_contig140.3.1 vs. uniprot
Match: A0A6H5KQ21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ21_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 3.520e-20
Identity = 180/538 (33.46%), Postives = 223/538 (41.45%), Query Frame = 0
Query:  120 GYYKENHPEDERYKDAQVLLDGVCVSLVRMLVPFLHDHFNKPCTDHETKEQ--ARMYDAFAVNQLTWPELARQCVMLRILRDQLGMDQTEATGWLRGGARRDPTTQRRDWQVDRATLALLRRRIERRWHGGAYERXXXXXXXXXXXXXXSSPLXXXXXXGPEHGTASATRGAXXXXRARPKAELESKQDAEPEVTSEAGQKENGDADGPVHSRVKSEEQKEXXXXXXXXXXXXXXGNGSATGVSPVKHESGDGAKKTVTFEAGAPEVHYRPADGDAPAQKGKPPAAPAGAGAAAVGSLSKDGSEHGXXXXXXXXXXXXXXXXXXXXDGASIKTGEDEAGXXXXXXXXXXXXXDNLESDDAVWATLRRRLDVLAADNGRGEALRRCAAVLRAFAAHPRAAVFGTAVSKDEEPDYAKIVERPVSIETIAEGLESGRYERTAATLGLFVGDNSCGGDGXXXXXXADPTV--PFVSDVRLMMEDCWCYNSEAADAWHAAARMSVVAERLLREWVW---PAPPARPLPLSAATDGFEPCSGCG 650
            G Y E    +E  K+AQ LLDGVC+S+VR+L   LH     PC   + KE+    M +   VNQ+TWPELARQC++  + ++ L M   E TGW+RG  R         W   R    LLR+R+E+R                                    G  +A   A                 A P  TS AG      +D              XXXXXXXXXXXXXX                                                                       XXXXXXXXXXXXXXXXXXXX             XXXXXXXXXXXXX    +D+ V   LRRRL  LA D G+ EA+RRCA VLR  A H    VF   + + + P+Y  ++E P+++ ++ + LE           G   G  +   +G      A+  +   F   VR M E+CW YN E   AW AA R+S V ERLLREW+    PAPP  P  L   T    PCS CG
Sbjct: 1037 GGYGEEEGGEEAKKEAQALLDGVCMSIVRVLSIDLHTVLGSPCDQQKDKERESVAMSEVLVVNQMTWPELARQCIVANLAKEYLHMPDAEVTGWVRGAERH--------WTAARPYNILLRQRVEQR------------------------------------GNPTAAVVAT----------------AAPAATS-AGNAAVSSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDETV---LRRRLHGLAEDEGKPEAVRRCAVVLREIARHRLGGVFLFPMDRMQSPEYYAVIEEPITVLSLLDFLE-----------GWSCGGTAEASEGGRSKAEAEAGLVDEFTISVRRMWENCWSYNHEGTKAWVAAVRLSSVFERLLREWILRATPAPPGLPQLLGGET---RPCSACG 1470          
BLAST of mRNA_P-wetherbeei_contig140.3.1 vs. uniprot
Match: D8LI13_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI13_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 2.400e-19
Identity = 70/172 (40.70%), Postives = 91/172 (52.91%), Query Frame = 0
Query:  480 ATLRRRLDVLAADNGRGEALRRCAAVLRAFAAHPRAAVFGTAVSKDEEPDYAKIVERPVSIETIAEGLESGRYERTAATLGLFVGDNSCGGDGXXXXXXADPTVPFVSDVRLMMEDCWCYNSEAADAWHAAARMSVVAERLLREWVWPAPPARP-LPLSAATDGFEPCSGCG 650
            A LRRRL  LA D G+ EA+RRCA VLR  A H    VF   + + + P+Y  ++E P+++ ++ + LE      TA        + S GG+       A     F   VR M E+CW YN E   AW AA R+S V ERLLREW+  A PA P LP    ++   PCS CG
Sbjct:  905 AVLRRRLHGLAEDEGKPEAVRRCAVVLREIARHRLGGVFLFPMDRMQSPEYYAVIEEPITVLSLLDFLEGWSCGGTA--------EASEGGESTAEAE-AGLVDEFTISVRRMWENCWSYNHEGTKAWLAAVRLSSVFERLLREWILRATPAPPGLPQLLGSEA-RPCSACG 1066          
BLAST of mRNA_P-wetherbeei_contig140.3.1 vs. uniprot
Match: A0A8J5IMR6_9STRA (Cation-transporting ATPase n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IMR6_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 8.360e-5
Identity = 45/147 (30.61%), Postives = 65/147 (44.22%), Query Frame = 0
Query:  502 CAAVLRAFAAHPRAAVFGTAVSKDEEPDYAKI--VERPVSIETIAEGLESGRYERTAATLGLFVGDNSCGGDGXXXXXXADPTVPFVSDVRLMMEDCWCYNSEAADAWHAAARMSVVAERLLREWVWPAPPARPLPLSAATDGFEPC 646
            C  VL+   A   AA F   V  +  PDY     +  P+ + TI+E +E   YE                          D    FV DV+LM  +C+ YNS  A+  + A ++SV+ ERL++EWV   P  RP+ ++A  D    C
Sbjct:  960 CGFVLKLLRAKEIAAPFNQPVDAELYPDYYSSGDIPEPMDLGTISEKIEDEDYEH-------------------------DDVESFVDDVQLMWRNCYTYNSLKAEISNLAQKLSVIFERLMKEWVH-TPVNRPM-IAAEEDSCRNC 1079          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig140.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KQ21_9PHAE3.520e-2033.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI13_ECTSI2.400e-1940.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8J5IMR6_9STRA8.360e-530.61Cation-transporting ATPase n=1 Tax=Phytophthora al... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 527..543
score: 38.87
coord: 588..607
score: 31.41
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 502..611
e-value: 2.2E-10
score: 40.4
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 510..607
score: 13.1198
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 490..626
e-value: 7.9E-19
score: 69.4
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 496..624
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 297..337
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 245..475
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..127
NoneNo IPR availableCDDcd04369Bromodomaincoord: 500..621
e-value: 2.25198E-8
score: 50.0634

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig140contigP-wetherbeei_contig140:5589..7832 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig140.3.1mRNA_P-wetherbeei_contig140.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig140 5589..7832 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig140.3.1 ID=prot_P-wetherbeei_contig140.3.1|Name=mRNA_P-wetherbeei_contig140.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=654bp
PAPAAPAAATAAGSRSAEEGGGGGGGRPTAADLMAVDEAAAGSTATATAA
APRPARGGDIMDEEEAEFGDDAPAAGGSCGGGDHNHSSPAAAHTAPAPAA
TASPRRRGGGHGGGGVHGAGYYKENHPEDERYKDAQVLLDGVCVSLVRML
VPFLHDHFNKPCTDHETKEQARMYDAFAVNQLTWPELARQCVMLRILRDQ
LGMDQTEATGWLRGGARRDPTTQRRDWQVDRATLALLRRRIERRWHGGAY
ERQQPPSSPLPPHHHHSSPLHHHHSSGPEHGTASATRGAAAAARARPKAE
LESKQDAEPEVTSEAGQKENGDADGPVHSRVKSEEQKESGGVGGSSGGGG
CCGNGSATGVSPVKHESGDGAKKTVTFEAGAPEVHYRPADGDAPAQKGKP
PAAPAGAGAAAVGSLSKDGSEHGGAAAAAGGGGGGGGDDNMDDDGASIKT
GEDEAGGDASGSDASDNDEDNLESDDAVWATLRRRLDVLAADNGRGEALR
RCAAVLRAFAAHPRAAVFGTAVSKDEEPDYAKIVERPVSIETIAEGLESG
RYERTAATLGLFVGDNSCGGDGGNGGGGADPTVPFVSDVRLMMEDCWCYN
SEAADAWHAAARMSVVAERLLREWVWPAPPARPLPLSAATDGFEPCSGCG
GALL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf