prot_P-wetherbeei_contig13948.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig13948.1.1
Unique Nameprot_P-wetherbeei_contig13948.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length180
Homology
BLAST of mRNA_P-wetherbeei_contig13948.1.1 vs. uniprot
Match: A0A060STY7_PYCCI (Uncharacterized protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060STY7_PYCCI)

HSP 1 Score: 106 bits (264), Expect = 6.820e-25
Identity = 71/176 (40.34%), Postives = 97/176 (55.11%), Query Frame = 0
Query:    3 AATRVQRYLIVTPTLGLLYCRQPAAATATTTPATASAAKALELVGYSGASLAGCLDSGRSTTSGLFLLTCGIVTFSSRLQHSVARSTMESEYMALFDAAQDAKQLRELLAHLGLEQTGPTVIREENMAALVVAMAARHTRQSRHIRIRYHFTRELVAAGVIVVEQVSTADQQADSL 178
            AA RV RYL  T TLG++YC            AT  +   LE +GYS A  A  LD  +S    +FLL    +T+SSR Q +VA+S+ME+EYMA+  AA +   LR LL  LG   +GPT +  +N +A+  A        ++HI I YHF RE +A+  +VV    + D  AD+L
Sbjct:   71 AAKRVLRYLKGTRTLGIIYCAN----------ATTDSDHPLEPLGYSDADWANDLDDRKSIAGQVFLLGGAPITWSSRKQRTVAKSSMEAEYMAMSAAASEIAWLRALLTELGFPPSGPTPLYVDNQSAIASANVQTSHACTKHIDIHYHFIRERIASNEVVVNHCPSEDNLADAL 236          
BLAST of mRNA_P-wetherbeei_contig13948.1.1 vs. uniprot
Match: A0A060SR77_PYCCI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SR77_PYCCI)

HSP 1 Score: 108 bits (269), Expect = 5.080e-24
Identity = 72/177 (40.68%), Postives = 98/177 (55.37%), Query Frame = 0
Query:    2 MAATRVQRYLIVTPTLGLLYCRQPAAATATTTPATASAAKALELVGYSGASLAGCLDSGRSTTSGLFLLTCGIVTFSSRLQHSVARSTMESEYMALFDAAQDAKQLRELLAHLGLEQTGPTVIREENMAALVVAMAARHTRQSRHIRIRYHFTRELVAAGVIVVEQVSTADQQADSL 178
            MAA RV RYL  T  LG++YC            AT  +   LE +GYS A  A  LD  +S    +FLL    +T+SSR Q +VA+S+ME+EYMA   AA +   LR LL  LG   +GPT +  +N +A+  A A     +++HI I YHF RE +A+  +VV    + D  AD+L
Sbjct:  565 MAAKRVLRYLKGTRMLGIIYCAN----------ATTDSDHPLEPIGYSDADWANDLDDRKSIAGQVFLLGGAPITWSSRKQRTVAKSSMEAEYMAASAAASEIAWLRALLTELGFPPSGPTPLYVDNQSAIASANAQTSHARTKHIDIHYHFIRERIASNEVVVNHCPSEDNLADAL 731          
BLAST of mRNA_P-wetherbeei_contig13948.1.1 vs. uniprot
Match: UPI00193CD1D9 (secreted RxLR effector protein 161-like n=1 Tax=Solenopsis invicta TaxID=13686 RepID=UPI00193CD1D9)

HSP 1 Score: 99.8 bits (247), Expect = 8.290e-23
Identity = 65/176 (36.93%), Postives = 100/176 (56.82%), Query Frame = 0
Query:    3 AATRVQRYLIVTPTLGLLYCRQPAAATATTTPATASAAKALELVGYSGASLAGCLDSGRSTTSGLFLLTCGIVTFSSRLQHSVARSTMESEYMALFDAAQDAKQLRELLAHLGLEQTGPTVIREENMAALVVAMAARHTRQSRHIRIRYHFTRELVAAGVIVVEQVSTADQQADSL 178
            AA R+ +YL  TP LG++Y R  +              K  +L+ YS A  A CLD+ +ST+  + +L  G + +SSR +H VA ST ++EY+A +DA ++    R+LL  +G+EQ  PT +  +N A   +       R+S+H+ I++H+TRELV    I ++ VST  Q AD L
Sbjct:   32 AAKRILKYLKSTPNLGIVYNRMTS--------------KPNQLIAYSDADYASCLDTRKSTSGVILMLNDGPIIWSSR-KHIVATSTTDAEYVAAYDATKEVVWSRQLLKDIGVEQFEPTTLFCDNAATQKLIENPIFHRKSKHVDIKFHYTRELVKQKQIKIQHVSTQSQLADIL 192          
BLAST of mRNA_P-wetherbeei_contig13948.1.1 vs. uniprot
Match: H3G557_PHYRM (Uncharacterized protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G557_PHYRM)

HSP 1 Score: 96.7 bits (239), Expect = 1.770e-21
Identity = 63/168 (37.50%), Postives = 95/168 (56.55%), Query Frame = 0
Query:    3 AATRVQRYLIVTPTLGLLYCRQPAAATATTTPATASAAKALELVGYSGASLAGCLDSGRSTTSGLFLLTCGIVTFSSRLQHSVARSTMESEYMALFDAAQDAKQLRELLAHLGLEQTGPTVIREENMAALVVAMAARHTRQSRHIRIRYHFTRELVAAGVIVVEQVST 170
            AA R+ +YL  T  LGL++                +     EL+GY+ A+ AG LDS RSTT  +F L    +++ S+ Q +VA S+ E+EYMAL++A Q+A  LR+LL  +G E  G T I ++N   + +A    +  +++HI ++YHF RE V   VIV+E   T
Sbjct:   74 AAKRILKYLKTTQDLGLVF----------------NGGTKGELIGYADANWAGDLDSRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTIFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPT 225          
BLAST of mRNA_P-wetherbeei_contig13948.1.1 vs. uniprot
Match: H3G656_PHYRM (Uncharacterized protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G656_PHYRM)

HSP 1 Score: 95.5 bits (236), Expect = 4.790e-21
Identity = 64/175 (36.57%), Postives = 98/175 (56.00%), Query Frame = 0
Query:    3 AATRVQRYLIVTPTLGLLYCRQPAAATATTTPATASAAKALELVGYSGASLAGCLDSGRSTTSGLFLLTCGIVTFSSRLQHSVARSTMESEYMALFDAAQDAKQLRELLAHLGLEQTGPTV-IREENMAALVVAMAARHTRQSRHIRIRYHFTRELVAAGVIVVEQVSTADQQAD 176
            A  RV RYL  TPT GL + R+ +                L + GYS A  AG ++S RST+   F++  G +++ S+ Q +VA S+ E+EYMAL +A Q+A  L+  L  LG   +   V I ++N  ++ +A   +  ++++HI IRYHF RE V  G +V++ +ST D  AD
Sbjct:   46 ALKRVLRYLQATPTHGLEFSREDS----------------LGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYKDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYISTTDMLAD 204          
BLAST of mRNA_P-wetherbeei_contig13948.1.1 vs. uniprot
Match: H3GB69_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB69_PHYRM)

HSP 1 Score: 96.7 bits (239), Expect = 8.370e-21
Identity = 63/174 (36.21%), Postives = 97/174 (55.75%), Query Frame = 0
Query:    3 AATRVQRYLIVTPTLGLLYCRQPAAATATTTPATASAAKALELVGYSGASLAGCLDSGRSTTSGLFLLTCGIVTFSSRLQHSVARSTMESEYMALFDAAQDAKQLRELLAHLGLEQTGPTVIREENMAALVVAMAARHTRQSRHIRIRYHFTRELVAAGVIVVEQVSTADQQAD 176
            AA R+ +YL  T  LGL++                +     EL+GY+ A+ AG LD+ RSTT  +F L    +++ S+ Q +VA S+ E+EYMAL++A Q+A  LR+LL  +G E  G T   ++N   + +A    +  +++HI ++YHF RE V   VIV+E   T +  AD
Sbjct:  133 AAKRILKYLKTTQDLGLVF----------------NGGTKGELIGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTFFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMIAD 290          
BLAST of mRNA_P-wetherbeei_contig13948.1.1 vs. uniprot
Match: H3GB71_PHYRM (Uncharacterized protein n=5 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB71_PHYRM)

HSP 1 Score: 96.7 bits (239), Expect = 9.140e-21
Identity = 65/177 (36.72%), Postives = 99/177 (55.93%), Query Frame = 0
Query:    3 AATRVQRYLIVTPTLGLLYCRQPAAATATTTPATASAAKALELVGYSGASLAGCLDSGRSTTSGLFLLTCGIVTFSSRLQHSVARSTMESEYMALFDAAQDAKQLRELLAHLGLEQTGPTV-IREENMAALVVAMAARHTRQSRHIRIRYHFTRELVAAGVIVVEQVSTADQQADSL 178
            A  RV RYL  TPT GL + R+ +                + + GYS A  AG ++S RST+   F++  G +++ S+ Q +VA S+ E+EYMAL +A Q+A  L+  L  LG   +   V I E+N  ++ +A   +  ++++HI IRYHF RE V  G +V++ VST D  AD +
Sbjct:  116 ALKRVLRYLQATPTHGLEFSREDS----------------VGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMM 276          
BLAST of mRNA_P-wetherbeei_contig13948.1.1 vs. uniprot
Match: H3H9Q4_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H9Q4_PHYRM)

HSP 1 Score: 98.6 bits (244), Expect = 1.120e-20
Identity = 66/177 (37.29%), Postives = 100/177 (56.50%), Query Frame = 0
Query:    3 AATRVQRYLIVTPTLGLLYCRQPAAATATTTPATASAAKALELVGYSGASLAGCLDSGRSTTSGLFLLTCGIVTFSSRLQHSVARSTMESEYMALFDAAQDAKQLRELLAHLGLEQTGPTV-IREENMAALVVAMAARHTRQSRHIRIRYHFTRELVAAGVIVVEQVSTADQQADSL 178
            A  RV RYL  TPT GL + R+ +                L + GYS A  AG ++S RST+   F++  G +++ S+ Q +VA S+ E+EYMAL +A Q+A  L+ +L  LG   +   V I E+N  ++ +A   +  ++++HI IRYHF RE V  G +V++ VST D  AD +
Sbjct:  491 ALKRVLRYLQATPTHGLEFSREDS----------------LGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVILCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMM 651          
BLAST of mRNA_P-wetherbeei_contig13948.1.1 vs. uniprot
Match: H3GB98_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB98_PHYRM)

HSP 1 Score: 97.8 bits (242), Expect = 1.120e-20
Identity = 66/177 (37.29%), Postives = 99/177 (55.93%), Query Frame = 0
Query:    3 AATRVQRYLIVTPTLGLLYCRQPAAATATTTPATASAAKALELVGYSGASLAGCLDSGRSTTSGLFLLTCGIVTFSSRLQHSVARSTMESEYMALFDAAQDAKQLRELLAHLGLEQTGPTV-IREENMAALVVAMAARHTRQSRHIRIRYHFTRELVAAGVIVVEQVSTADQQADSL 178
            A  RV RYL  TPT GL + R+ +                L + GYS A  AG ++S RST+   F++  G +++ S+ Q +VA S+ E+EYMAL +A Q+A  L+  L  LG   +   V I E+N  ++ +A   +  ++++HI IRYHF RE V  G +V++ VST D  AD +
Sbjct:  229 ALKRVLRYLQATPTHGLEFSREDS----------------LGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMM 389          
BLAST of mRNA_P-wetherbeei_contig13948.1.1 vs. uniprot
Match: A0A8H8SJ14_9AGAM (Copia-like polyprotein/retrotransposon n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8SJ14_9AGAM)

HSP 1 Score: 98.6 bits (244), Expect = 1.270e-20
Identity = 63/176 (35.80%), Postives = 100/176 (56.82%), Query Frame = 0
Query:    3 AATRVQRYLIVTPTLGLLYCRQPAAATATTTPATASAAKALELVGYSGASLAGCLDSGRSTTSGLFLLTCGIVTFSSRLQHSVARSTMESEYMALFDAAQDAKQLRELLAHLGLEQTGPTVIREENMAALVVAMAARHTRQSRHIRIRYHFTRELVAAGVIVVEQVSTADQQADSL 178
            A  RV RYL  T  LG++Y R                   L+L+GY  A  AG  ++ RSTT   FLL  G++ +SSR Q +++ S+ E+EY+A   AA++   +R+ L+ LG    G T +  +N +A+ +A    + + ++HIR++YHF RE++A   + ++ VST DQ AD+L
Sbjct: 1242 AGKRVLRYLKGTSNLGIVYHRS----------------SDLKLLGYVDADYAGDKNTSRSTTGWAFLLAGGVIAYSSRKQPTISLSSTEAEYVADASAARELIWIRQFLSELGFLPEGATPLLSDNQSAMALAKNPINHQTTKHIRVKYHFIREVIALKELDLQYVSTEDQVADAL 1401          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13948.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A060STY7_PYCCI6.820e-2540.34Uncharacterized protein n=1 Tax=Pycnoporus cinnaba... [more]
A0A060SR77_PYCCI5.080e-2440.68Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI00193CD1D98.290e-2336.93secreted RxLR effector protein 161-like n=1 Tax=So... [more]
H3G557_PHYRM1.770e-2137.50Uncharacterized protein n=3 Tax=Phytophthora ramor... [more]
H3G656_PHYRM4.790e-2136.57Uncharacterized protein n=3 Tax=Phytophthora ramor... [more]
H3GB69_PHYRM8.370e-2136.21Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3GB71_PHYRM9.140e-2136.72Uncharacterized protein n=5 Tax=Phytophthora ramor... [more]
H3H9Q4_PHYRM1.120e-2037.29Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
H3GB98_PHYRM1.120e-2037.29Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8H8SJ14_9AGAM1.270e-2035.80Copia-like polyprotein/retrotransposon n=1 Tax=Cer... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 46..178
e-value: 5.33845E-45
score: 143.378

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13948contigP-wetherbeei_contig13948:108..647 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13948.1.1mRNA_P-wetherbeei_contig13948.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig13948 27..1393 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig13948.1.1 ID=prot_P-wetherbeei_contig13948.1.1|Name=mRNA_P-wetherbeei_contig13948.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=180bp
MMAATRVQRYLIVTPTLGLLYCRQPAAATATTTPATASAAKALELVGYSG
ASLAGCLDSGRSTTSGLFLLTCGIVTFSSRLQHSVARSTMESEYMALFDA
AQDAKQLRELLAHLGLEQTGPTVIREENMAALVVAMAARHTRQSRHIRIR
YHFTRELVAAGVIVVEQVSTADQQADSLK*
back to top