mRNA_P-wetherbeei_contig13948.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13948.1.1 vs. uniprot
Match: A0A060STY7_PYCCI (Uncharacterized protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060STY7_PYCCI) HSP 1 Score: 105 bits (263), Expect = 2.420e-22 Identity = 71/176 (40.34%), Postives = 97/176 (55.11%), Query Frame = 1
Query: 88 AATRVQRYLIVTPTLGLLYCRQPAAATATTTPATASAAKALELVGYSGASLAGCLDSGRSTTSGLFLLTCGIVTFSSRLQHSVARSTMESEYMALFDAAQDAKQLRELLAHLGLEQTGPTVIREENMAALVVAMAARHTRQSRHIRIRYHFTRELVAAGVIVVEQVSTADQQADSL 615
AA RV RYL T TLG++YC AT + LE +GYS A A LD +S +FLL +T+SSR Q +VA+S+ME+EYMA+ AA + LR LL LG +GPT + +N +A+ A ++HI I YHF RE +A+ +VV + D AD+L
Sbjct: 71 AAKRVLRYLKGTRTLGIIYCAN----------ATTDSDHPLEPLGYSDADWANDLDDRKSIAGQVFLLGGAPITWSSRKQRTVAKSSMEAEYMAMSAAASEIAWLRALLTELGFPPSGPTPLYVDNQSAIASANVQTSHACTKHIDIHYHFIRERIASNEVVVNHCPSEDNLADAL 236
BLAST of mRNA_P-wetherbeei_contig13948.1.1 vs. uniprot
Match: A0A060SR77_PYCCI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SR77_PYCCI) HSP 1 Score: 109 bits (272), Expect = 8.700e-22 Identity = 76/193 (39.38%), Postives = 105/193 (54.40%), Query Frame = 1
Query: 82 MMAATRVQRYLIVTPTLGLLYCRQPAAATATTTPATASAAKALELVGYSGASLAGCLDSGRSTTSGLFLLTCGIVTFSSRLQHSVARSTMESEYMALFDAAQDAKQLRELLAHLGLEQTGPTVIREENMAALVVAMAARHTRQSRHIRIRYHFTRELVAAGVIVVEQVSTADQQADSLK*NVGQERLLALRAR 660
+MAA RV RYL T LG++YC AT + LE +GYS A A LD +S +FLL +T+SSR Q +VA+S+ME+EYMA AA + LR LL LG +GPT + +N +A+ A A +++HI I YHF RE +A+ +VV + D AD+L + + R AL R
Sbjct: 564 IMAAKRVLRYLKGTRMLGIIYCAN----------ATTDSDHPLEPIGYSDADWANDLDDRKSIAGQVFLLGGAPITWSSRKQRTVAKSSMEAEYMAASAAASEIAWLRALLTELGFPPSGPTPLYVDNQSAIASANAQTSHARTKHIDIHYHFIRERIASNEVVVNHCPSEDNLADALTKALPRPRHQALTTR 746
BLAST of mRNA_P-wetherbeei_contig13948.1.1 vs. uniprot
Match: UPI00193CD1D9 (secreted RxLR effector protein 161-like n=1 Tax=Solenopsis invicta TaxID=13686 RepID=UPI00193CD1D9) HSP 1 Score: 99.4 bits (246), Expect = 1.960e-20 Identity = 65/176 (36.93%), Postives = 100/176 (56.82%), Query Frame = 1
Query: 88 AATRVQRYLIVTPTLGLLYCRQPAAATATTTPATASAAKALELVGYSGASLAGCLDSGRSTTSGLFLLTCGIVTFSSRLQHSVARSTMESEYMALFDAAQDAKQLRELLAHLGLEQTGPTVIREENMAALVVAMAARHTRQSRHIRIRYHFTRELVAAGVIVVEQVSTADQQADSL 615
AA R+ +YL TP LG++Y R + K +L+ YS A A CLD+ +ST+ + +L G + +SSR +H VA ST ++EY+A +DA ++ R+LL +G+EQ PT + +N A + R+S+H+ I++H+TRELV I ++ VST Q AD L
Sbjct: 32 AAKRILKYLKSTPNLGIVYNRMTS--------------KPNQLIAYSDADYASCLDTRKSTSGVILMLNDGPIIWSSR-KHIVATSTTDAEYVAAYDATKEVVWSRQLLKDIGVEQFEPTTLFCDNAATQKLIENPIFHRKSKHVDIKFHYTRELVKQKQIKIQHVSTQSQLADIL 192
BLAST of mRNA_P-wetherbeei_contig13948.1.1 vs. uniprot
Match: H3G557_PHYRM (Uncharacterized protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G557_PHYRM) HSP 1 Score: 97.4 bits (241), Expect = 1.340e-19 Identity = 64/174 (36.78%), Postives = 97/174 (55.75%), Query Frame = 1
Query: 70 NTYDMMAATRVQRYLIVTPTLGLLYCRQPAAATATTTPATASAAKALELVGYSGASLAGCLDSGRSTTSGLFLLTCGIVTFSSRLQHSVARSTMESEYMALFDAAQDAKQLRELLAHLGLEQTGPTVIREENMAALVVAMAARHTRQSRHIRIRYHFTRELVAAGVIVVEQVST 591
N +AA R+ +YL T LGL++ + EL+GY+ A+ AG LDS RSTT +F L +++ S+ Q +VA S+ E+EYMAL++A Q+A LR+LL +G E G T I ++N + +A + +++HI ++YHF RE V VIV+E T
Sbjct: 68 NKSHRVAAKRILKYLKTTQDLGLVF----------------NGGTKGELIGYADANWAGDLDSRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTIFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPT 225
BLAST of mRNA_P-wetherbeei_contig13948.1.1 vs. uniprot
Match: H3G656_PHYRM (Uncharacterized protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G656_PHYRM) HSP 1 Score: 96.3 bits (238), Expect = 3.390e-19 Identity = 67/192 (34.90%), Postives = 105/192 (54.69%), Query Frame = 1
Query: 88 AATRVQRYLIVTPTLGLLYCRQPAAATATTTPATASAAKALELVGYSGASLAGCLDSGRSTTSGLFLLTCGIVTFSSRLQHSVARSTMESEYMALFDAAQDAKQLRELLAHLGLEQTGPTV-IREENMAALVVAMAARHTRQSRHIRIRYHFTRELVAAGVIVVEQVSTADQQADSLK*NVGQERLLALRAR 660
A RV RYL TPT GL + R+ + L + GYS A AG ++S RST+ F++ G +++ S+ Q +VA S+ E+EYMAL +A Q+A L+ L LG + V I ++N ++ +A + ++++HI IRYHF RE V G +V++ +ST D AD + + + LRA+
Sbjct: 46 ALKRVLRYLQATPTHGLEFSREDS----------------LGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYKDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYISTTDMLADIMTKAITAVQFRVLRAK 221
BLAST of mRNA_P-wetherbeei_contig13948.1.1 vs. uniprot
Match: H3GB69_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB69_PHYRM) HSP 1 Score: 97.4 bits (241), Expect = 6.760e-19 Identity = 64/180 (35.56%), Postives = 99/180 (55.00%), Query Frame = 1
Query: 70 NTYDMMAATRVQRYLIVTPTLGLLYCRQPAAATATTTPATASAAKALELVGYSGASLAGCLDSGRSTTSGLFLLTCGIVTFSSRLQHSVARSTMESEYMALFDAAQDAKQLRELLAHLGLEQTGPTVIREENMAALVVAMAARHTRQSRHIRIRYHFTRELVAAGVIVVEQVSTADQQAD 609
N +AA R+ +YL T LGL++ + EL+GY+ A+ AG LD+ RSTT +F L +++ S+ Q +VA S+ E+EYMAL++A Q+A LR+LL +G E G T ++N + +A + +++HI ++YHF RE V VIV+E T + AD
Sbjct: 127 NKSHWVAAKRILKYLKTTQDLGLVF----------------NGGTKGELIGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTFFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMIAD 290
BLAST of mRNA_P-wetherbeei_contig13948.1.1 vs. uniprot
Match: A0A2P4XPH2_9STRA (RxLR effector candidate protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XPH2_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 8.730e-19 Identity = 63/180 (35.00%), Postives = 99/180 (55.00%), Query Frame = 1
Query: 70 NTYDMMAATRVQRYLIVTPTLGLLYCRQPAAATATTTPATASAAKALELVGYSGASLAGCLDSGRSTTSGLFLLTCGIVTFSSRLQHSVARSTMESEYMALFDAAQDAKQLRELLAHLGLEQTGPTVIREENMAALVVAMAARHTRQSRHIRIRYHFTRELVAAGVIVVEQVSTADQQAD 609
N +AA R+ +YL T +GL++ + ELVGY+ A+ AG LD+ RSTT +F L +++ S+ Q +VA S+ E+EYMAL++A Q+A LR+LL LG E G T I ++N + +A + +++HI I++HF RE V + + +E T + AD
Sbjct: 55 NKSHWVAAKRILKYLKTTQDVGLVF----------------NGGIKGELVGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNAIQEAVWLRQLLKDLGYENKGATTIYQDNQGCIALAKNPAYHTRTKHIDIKFHFLREKVESKTVELEYKPTDEMIAD 218
BLAST of mRNA_P-wetherbeei_contig13948.1.1 vs. uniprot
Match: F2U3B8_SALR5 (Uncharacterized protein n=3 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U3B8_SALR5) HSP 1 Score: 94.7 bits (234), Expect = 9.160e-19 Identity = 72/181 (39.78%), Postives = 99/181 (54.70%), Query Frame = 1
Query: 73 TYDMMAATRVQRYLIVTPTLGLLYCRQPAAATATTTPATASAAKALELVGYSGASLAGCLDSGRSTTSGLFLLTCGIVTFSSRLQHSVARSTMESEYMALFDAAQDAKQLRELLAHLGLEQTGPTVIREENMAALVVAMAARHTRQSRHIRIRYHFTRELVAAGVIVVEQVSTADQQADSL 615
T AA V RYL T GLL+ R+ + T P L+LV YS AS +GRSTT + +V++SSRLQ +VA ST E+EYMA+ AAQD LR+LL LG + G T + +N AA+ + +++HIR+R+HF REL+A G IV++ AD+L
Sbjct: 6 TVHWQAAKHVVRYLKATSEHGLLFKRR--SGTRKDQP--------LDLVCYSDASFGTDQLTGRSTTGFTCYINGCLVSWSSRLQPTVALSTAEAEYMAISAAAQDVVFLRQLLMDLGEPEAGATKMLTDNQAAIAIGNDHVTKPRTKHIRVRHHFVRELIADGTIVLQHCPGTRMVADAL 176
BLAST of mRNA_P-wetherbeei_contig13948.1.1 vs. uniprot
Match: A0A8J2KV46_9HEXA (Hypothetical protein (Fragment) n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2KV46_9HEXA) HSP 1 Score: 95.1 bits (235), Expect = 1.010e-18 Identity = 68/185 (36.76%), Postives = 98/185 (52.97%), Query Frame = 1
Query: 70 NTYDM---MAATRVQRYLIVTPTLGLLYCRQPAAATATTTPATASAAKALELVGYSGASLAGCLDSGRSTTSGLFLLTCGIVTFSSRLQHSVARSTMESEYMALFDAAQDAKQLRELLAHLGLEQTGPTVIREENMAALVVAMAARHTRQSRHIRIRYHFTRELVAAGVIVVEQVSTADQQADSL 615
N+YD AA +V RYL T LG+ Y + + L+L GYS + AG +ST+ +F L +++++SR Q VA S+ E+EY+AL AA++A LR L LG Q PT I +N + + +A +++HI +RYH+TR LV AG I VE T Q+AD L
Sbjct: 49 NSYDKDHWKAAKQVLRYLKGTSNLGIRY----------------NPGRTLKLTGYSDSDYAGDKTERKSTSGQVFFLGKQLISWTSRKQPCVAMSSTEAEYIALASAAREAIWLRRFLNELGYHQDQPTTIFVDNQSTIKLAKNPELHSRTKHIDVRYHYTRTLVEAGEIQVEYTPTTSQKADGL 217
BLAST of mRNA_P-wetherbeei_contig13948.1.1 vs. uniprot
Match: H3GB17_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB17_PHYRM) HSP 1 Score: 97.8 bits (242), Expect = 1.630e-18 Identity = 65/180 (36.11%), Postives = 99/180 (55.00%), Query Frame = 1
Query: 70 NTYDMMAATRVQRYLIVTPTLGLLYCRQPAAATATTTPATASAAKALELVGYSGASLAGCLDSGRSTTSGLFLLTCGIVTFSSRLQHSVARSTMESEYMALFDAAQDAKQLRELLAHLGLEQTGPTVIREENMAALVVAMAARHTRQSRHIRIRYHFTRELVAAGVIVVEQVSTADQQAD 609
N +AA R+ +YL T LGL++ + EL+GY+ AS AG LD+ RSTT +F L +++ S+ Q +VA S+ E+EYMAL++A Q+A LR+LL +G E T I ++N + +A + +++HI ++YHF RE V VIV+E T + AD
Sbjct: 223 NKSHWVAAKRILKYLKTTQDLGLVF----------------NGGTKGELIGYADASWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVAATTIFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMIAD 386 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13948.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13948.1.1 >prot_P-wetherbeei_contig13948.1.1 ID=prot_P-wetherbeei_contig13948.1.1|Name=mRNA_P-wetherbeei_contig13948.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=180bp MMAATRVQRYLIVTPTLGLLYCRQPAAATATTTPATASAAKALELVGYSGback to top mRNA from alignment at P-wetherbeei_contig13948:27..1393+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13948.1.1 ID=mRNA_P-wetherbeei_contig13948.1.1|Name=mRNA_P-wetherbeei_contig13948.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1367bp|location=Sequence derived from alignment at P-wetherbeei_contig13948:27..1393+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13948:27..1393+ >mRNA_P-wetherbeei_contig13948.1.1 ID=mRNA_P-wetherbeei_contig13948.1.1|Name=mRNA_P-wetherbeei_contig13948.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=540bp|location=Sequence derived from alignment at P-wetherbeei_contig13948:27..1393+ (Phaeothamnion wetherbeei SAG_119_79)back to top |